BLASTX nr result

ID: Coptis25_contig00020909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020909
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL79042.1|AF469649_1 NIMA-related protein kinase [Populus tr...    46   4e-09
ref|XP_002328349.1| predicted protein [Populus trichocarpa] gi|2...    46   7e-09
gb|ABK95214.1| unknown [Populus trichocarpa]                           46   7e-09
ref|XP_002512228.1| ATP binding protein, putative [Ricinus commu...    46   3e-08
dbj|BAK03787.1| predicted protein [Hordeum vulgare subsp. vulgare]     47   3e-08

>gb|AAL79042.1|AF469649_1 NIMA-related protein kinase [Populus tremula x Populus alba]
          Length = 621

 Score = 46.2 bits (108), Expect(2) = 4e-09
 Identities = 22/24 (91%), Positives = 22/24 (91%)
 Frame = +1

Query: 190 DMQGLINKINKSIVAPLPTLYSGA 261
           DMQ LINKINKSIVAPLPT YSGA
Sbjct: 207 DMQALINKINKSIVAPLPTKYSGA 230



 Score = 39.3 bits (90), Expect(2) = 4e-09
 Identities = 18/31 (58%), Positives = 22/31 (70%)
 Frame = +3

Query: 264 AADLLRHPHLQPYVLQVPILPGF*NQVAIPF 356
           AA+LLRHPHLQPYVL++ I      Q  +PF
Sbjct: 249 AAELLRHPHLQPYVLKIHIKMNSPRQNTLPF 279


>ref|XP_002328349.1| predicted protein [Populus trichocarpa] gi|222838064|gb|EEE76429.1|
           predicted protein [Populus trichocarpa]
          Length = 620

 Score = 46.2 bits (108), Expect(2) = 7e-09
 Identities = 22/24 (91%), Positives = 22/24 (91%)
 Frame = +1

Query: 190 DMQGLINKINKSIVAPLPTLYSGA 261
           DMQ LINKINKSIVAPLPT YSGA
Sbjct: 207 DMQALINKINKSIVAPLPTKYSGA 230



 Score = 38.5 bits (88), Expect(2) = 7e-09
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = +3

Query: 264 AADLLRHPHLQPYVLQVPILPGF*NQVAIPF 356
           AA+LLRHPHLQPYVL++ +      Q  +PF
Sbjct: 249 AAELLRHPHLQPYVLKIHLKMNSPRQNTLPF 279


>gb|ABK95214.1| unknown [Populus trichocarpa]
          Length = 395

 Score = 46.2 bits (108), Expect(2) = 7e-09
 Identities = 22/24 (91%), Positives = 22/24 (91%)
 Frame = +1

Query: 190 DMQGLINKINKSIVAPLPTLYSGA 261
           DMQ LINKINKSIVAPLPT YSGA
Sbjct: 207 DMQALINKINKSIVAPLPTKYSGA 230



 Score = 38.5 bits (88), Expect(2) = 7e-09
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = +3

Query: 264 AADLLRHPHLQPYVLQVPILPGF*NQVAIPF 356
           AA+LLRHPHLQPYVL++ +      Q  +PF
Sbjct: 249 AAELLRHPHLQPYVLKIHLKMNSPRQNTLPF 279


>ref|XP_002512228.1| ATP binding protein, putative [Ricinus communis]
           gi|223548189|gb|EEF49680.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 608

 Score = 46.2 bits (108), Expect(2) = 3e-08
 Identities = 22/24 (91%), Positives = 22/24 (91%)
 Frame = +1

Query: 190 DMQGLINKINKSIVAPLPTLYSGA 261
           DMQ LINKINKSIVAPLPT YSGA
Sbjct: 207 DMQALINKINKSIVAPLPTKYSGA 230



 Score = 36.6 bits (83), Expect(2) = 3e-08
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = +3

Query: 264 AADLLRHPHLQPYVLQVPI 320
           AA+LLRHPHLQPYVL+V +
Sbjct: 249 AAELLRHPHLQPYVLKVQL 267


>dbj|BAK03787.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 508

 Score = 46.6 bits (109), Expect(2) = 3e-08
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = +1

Query: 190 DMQGLINKINKSIVAPLPTLYSGA 261
           DMQ LINKINKS+VAPLPT+YSGA
Sbjct: 128 DMQTLINKINKSVVAPLPTIYSGA 151



 Score = 36.2 bits (82), Expect(2) = 3e-08
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +3

Query: 264 AADLLRHPHLQPYVLQV 314
           AADLL HPHLQPYVL+V
Sbjct: 170 AADLLNHPHLQPYVLEV 186


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