BLASTX nr result

ID: Coptis25_contig00020904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020904
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513398.1| NAC domain-containing protein, putative [Ric...   342   1e-91
ref|XP_002283251.1| PREDICTED: NAC domain-containing protein 42 ...   332   9e-89
ref|NP_001242528.1| uncharacterized protein LOC100795553 [Glycin...   328   1e-87
ref|XP_003551931.1| PREDICTED: NAC domain-containing protein 42-...   321   2e-85
ref|XP_002310103.1| NAC domain protein, IPR003441 [Populus trich...   318   1e-84

>ref|XP_002513398.1| NAC domain-containing protein, putative [Ricinus communis]
           gi|223547306|gb|EEF48801.1| NAC domain-containing
           protein, putative [Ricinus communis]
          Length = 299

 Score =  342 bits (876), Expect = 1e-91
 Identities = 180/303 (59%), Positives = 218/303 (71%), Gaps = 6/303 (1%)
 Frame = -2

Query: 987 MELEKMKSSQDMNKDDDSILLPGFRFHPTDEELVGFYLRRKVDKKPLSIELIKQIDIYKY 808
           M + K   S  M+  DD + LPGFRFHPTDEEL+GFYLRRKVDKKPL IELIKQ+DIYKY
Sbjct: 1   MNVNKKSCSGSMDYHDDEVALPGFRFHPTDEELIGFYLRRKVDKKPLRIELIKQVDIYKY 60

Query: 807 DPWDLPI-SSVGEKEMYFFCIRERKYRNSIRPNRVTGSGFWKATGIDRPIYSIAGETDDC 631
           DPWDLP  SSVG+KE YFFC R RKYRNSIRPNRVTGSGFWKATGID+P+YS  GE  DC
Sbjct: 61  DPWDLPKPSSVGDKEGYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSNGGEGRDC 120

Query: 630 IGLKKSLVYYRGSAGKGTKTDWMMHEFRLPATVKSTNCNLPSPKNNTLEAEIWTLCRIFK 451
           IGLKK+LVYYRGSAGKGTKTDWMMHEFRLP    +TN +  + K +  EAE+WTLCRIFK
Sbjct: 121 IGLKKTLVYYRGSAGKGTKTDWMMHEFRLPTNDSNTN-SPANAKTSAPEAEVWTLCRIFK 179

Query: 450 RNASYRKYAPAWRETPIKQNPS-DSNSQTNSLESVNRDK--SFGAPVVQQKQSNKQFLSH 280
           RN S+RKY   WRE   K  P+ D++S+T S++S +R+   SFG P +Q  +  K   +H
Sbjct: 180 RNVSHRKYTADWRELSTKHQPAIDTSSKTCSVDSNSRENYLSFGDPAIQYSE-KKPVFNH 238

Query: 279 TEERVHMF-PDQLGSLTTTPAQYNTAVYSNSISF-NSSELFLRDRNWDELGTIVEFASDS 106
             ER   +  DQL S+    +  ++++ S++IS    +E F  D  WDEL +IVEF  D 
Sbjct: 239 VNERKQFYHADQLSSIVQPQSMVSSSIISSNISSPYGNEFFSGD--WDELRSIVEFTFDP 296

Query: 105 SLL 97
           + L
Sbjct: 297 TPL 299


>ref|XP_002283251.1| PREDICTED: NAC domain-containing protein 42 [Vitis vinifera]
           gi|302143522|emb|CBI22083.3| unnamed protein product
           [Vitis vinifera]
          Length = 298

 Score =  332 bits (851), Expect = 9e-89
 Identities = 177/306 (57%), Positives = 217/306 (70%), Gaps = 5/306 (1%)
 Frame = -2

Query: 987 MELEKMKSSQDMNKDDDSILLPGFRFHPTDEELVGFYLRRKVDKKPLSIELIKQIDIYKY 808
           ME+EK  +  +   DD+ ++LPGFRFHPTDEELVGFYLRRKV+KKP+S+ELIKQ+DIYKY
Sbjct: 1   MEVEKTSTLDNKKDDDEEVVLPGFRFHPTDEELVGFYLRRKVEKKPISLELIKQVDIYKY 60

Query: 807 DPWDLP--ISSVGEKEMYFFCIRERKYRNSIRPNRVTGSGFWKATGIDRPIYSIAGETDD 634
           DPWDLP   +++G++E YFFCIR RKYRNSIRPNRVTGSGFWKATGID+PIYS+   T++
Sbjct: 61  DPWDLPRVSTNMGDREWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYSVEA-TNE 119

Query: 633 CIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPATVKSTNCNLPSPKNNTLEAEIWTLCRIF 454
           CIGLKKSLVYYRGSAGKGTKTDWMMHEFRLP   K T    P+ KN T EAE+WTLCRIF
Sbjct: 120 CIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPGGKGT--YFPNAKNVTQEAEVWTLCRIF 177

Query: 453 KRNASYRKYAPAWR-ETPIKQNPSDSNSQTNSLESVNRDK--SFGAPVVQQKQSNKQFLS 283
           KR+ +YRKY P  +     KQ  +DS+S+T SLES N DK  SF     + K S     S
Sbjct: 178 KRSPTYRKYTPEGKGSISNKQVATDSSSKTCSLESDNNDKYLSFENSTTRTKNST-VVDS 236

Query: 282 HTEERVHMFPDQLGSLTTTPAQYNTAVYSNSISFNSSELFLRDRNWDELGTIVEFASDSS 103
             +ER  +   Q+ S  +      +  YS+  + N ++ F    NWDEL +IVE A D  
Sbjct: 237 SIDERSQLVVGQMSSFVSP----YSGPYSSFWNPNGNDQFFTSGNWDELRSIVESAIDPP 292

Query: 102 LLYGCK 85
            +Y C+
Sbjct: 293 HVYDCR 298


>ref|NP_001242528.1| uncharacterized protein LOC100795553 [Glycine max]
            gi|255638953|gb|ACU19778.1| unknown [Glycine max]
          Length = 325

 Score =  328 bits (841), Expect = 1e-87
 Identities = 177/322 (54%), Positives = 228/322 (70%), Gaps = 13/322 (4%)
 Frame = -2

Query: 1029 LKVTRSVSHREKVIMELEKMKSSQDMN-KDDDSILLPGFRFHPTDEELVGFYLRRKVDKK 853
            +KV +  S   ++IM++ K+ +S D + K ++ ++LPGFRFHPTDEELVGFYLRRKV+KK
Sbjct: 1    MKVPKFSSVAHRLIMDVAKLHNSDDDDDKKEEEVVLPGFRFHPTDEELVGFYLRRKVEKK 60

Query: 852  PLSIELIKQIDIYKYDPWDLPISSVGEKEMYFFCIRERKYRNSIRPNRVTGSGFWKATGI 673
            PL IELIKQIDIYKYDPWDLP+SSVGEKE YFFCIR RKYRNSIRPNRVTGSGFWKATGI
Sbjct: 61   PLRIELIKQIDIYKYDPWDLPMSSVGEKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGI 120

Query: 672  DRPIYSIAGETDDCIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPATVKSTNCNLPSPKNN 493
            D+PIY +  E  +CIGLKKSLVYYRGSAGKGTKTDWMMHEFRLP   K++N    +  N+
Sbjct: 121  DKPIYCVR-EPQECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKTSNNPQANDAND 179

Query: 492  TLEAEIWTLCRIFKRNASYRKYAPAWRET--PIKQ--NPSD-SNSQTNSLESVN------ 346
              EAE+WTLCRIFKR  +Y+KY P  +++  PI +  +P++ S+S+T SLES N      
Sbjct: 180  VQEAEVWTLCRIFKRVPTYKKYTPNLKDSAAPITEPNHPTNSSSSKTCSLESDNCKPYLT 239

Query: 345  RDKSFGAPVVQQKQSNKQFLSHTE-ERVHMFPDQLGSLTTTPAQYNTAVYSNSISFNSSE 169
               S    ++ Q +       H + ER H+   QLG++   P+ +N    +N++ F    
Sbjct: 240  FTNSSSPQLILQNERKPVINGHVDVERNHLLLGQLGNVAQAPSFWNHH-QNNNVEF---- 294

Query: 168  LFLRDRNWDELGTIVEFASDSS 103
                + NWD+L ++V+FA D S
Sbjct: 295  ---ANENWDDLTSVVQFAIDPS 313


>ref|XP_003551931.1| PREDICTED: NAC domain-containing protein 42-like [Glycine max]
          Length = 304

 Score =  321 bits (823), Expect = 2e-85
 Identities = 168/305 (55%), Positives = 213/305 (69%), Gaps = 5/305 (1%)
 Frame = -2

Query: 975 KMKSSQDMNKDDDSILLPGFRFHPTDEELVGFYLRRKVDKKPLSIELIKQIDIYKYDPWD 796
           K+ SS D  KD++ ++LPGFRFHPTDEELVGFYL+RKVDKKPL IELIKQ+DIYKYDPWD
Sbjct: 4   KVHSSDDTKKDEE-VVLPGFRFHPTDEELVGFYLQRKVDKKPLKIELIKQVDIYKYDPWD 62

Query: 795 LP-ISSVGEKEMYFFCIRERKYRNSIRPNRVTGSGFWKATGIDRPIYSIAGETDDCIGLK 619
           LP ++S G+KE YFFCIR RKYRNS+RPNRVT SGFWKATGID+ IY +  E  +CIGLK
Sbjct: 63  LPKVNSFGDKEWYFFCIRGRKYRNSVRPNRVTRSGFWKATGIDKSIYCVK-EPHECIGLK 121

Query: 618 KSLVYYRGSAGKGTKTDWMMHEFRLPATVKSTNCNLPSPKNNTLEAEIWTLCRIFKRNAS 439
           KSLVYYRGSAGKGTKTDWMMHEFRLP   KS+        N+  EAE+WTLCRIFKR  S
Sbjct: 122 KSLVYYRGSAGKGTKTDWMMHEFRLPPNAKSS-------PNDVQEAEVWTLCRIFKRIPS 174

Query: 438 YRKYAPAWRETPIKQNPSDSNSQTNSLESVNRDKSF---GAPVVQQKQSNKQFLSHTEER 268
           ++KYAP  +++     P+  NS  ++L+S N  K +     P++ Q+   K  +   +E+
Sbjct: 175 FKKYAPNLKDSTPATKPNPVNSNASTLDSDNCCKPYLICRDPMMMQQIERKPVIGQVDEK 234

Query: 267 VHMFPDQLGSLTTTPAQYNTAVYSNSISFNSSE-LFLRDRNWDELGTIVEFASDSSLLYG 91
            H+F  Q G L+   A  +T  Y N  + N+ E     + NWD+L ++V+FA D S ++ 
Sbjct: 235 KHLFLGQFGPLSHLQAP-STTPYPNFWNQNNVEDHAFANENWDDLRSVVQFAIDPSTVFD 293

Query: 90  CK*KY 76
           C   Y
Sbjct: 294 CTETY 298


>ref|XP_002310103.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222853006|gb|EEE90553.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 302

 Score =  318 bits (816), Expect = 1e-84
 Identities = 175/294 (59%), Positives = 207/294 (70%), Gaps = 10/294 (3%)
 Frame = -2

Query: 948 KDD--DSILLPGFRFHPTDEELVGFYLRRKVDKKPLSIELIKQIDIYKYDPWDLPI-SSV 778
           KDD  +   LPGFRFHPTDEELVGFYLRRKVDKKPL+IELIKQ+DIYKYDPWDLP  SSV
Sbjct: 14  KDDGVEEAQLPGFRFHPTDEELVGFYLRRKVDKKPLNIELIKQVDIYKYDPWDLPKPSSV 73

Query: 777 GEKEMYFFCIRERKYRNSIRPNRVTGSGFWKATGIDRPIYSIAGETDDCIGLKKSLVYYR 598
           G+ E YFFC R RKYRNSIRPNRVTGSGFWKATGID+P+YS+ GE  DCIGLKK+LVYYR
Sbjct: 74  GDNEGYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSLGGEGRDCIGLKKTLVYYR 133

Query: 597 GSAGKGTKTDWMMHEFRLPATVKSTNCN-LPSPKNNTLEAEIWTLCRIFKRNASYRKYAP 421
           GSAGKGTKTDWMMHEFRLP +  +T+   +   + +  EAE+WTLCRIFKRN SYRKY P
Sbjct: 134 GSAGKGTKTDWMMHEFRLPTSDNNTSSTAIAKAEISPQEAEVWTLCRIFKRNVSYRKYTP 193

Query: 420 AWRE--TPIKQNPSDSNSQTNSLESVNRDK----SFGAPVVQQKQSNKQFLSHTEERVHM 259
            WR+  T  +Q P D++S+  S    N  +    SFGAP++Q    N    S+  ER  +
Sbjct: 194 DWRQLSTKCQQPPIDTSSKICSPAESNYKQESYVSFGAPLIQH-YDNMPPGSNAIERKPL 252

Query: 258 FPDQLGSLTTTPAQYNTAVYSNSISFNSSELFLRDRNWDELGTIVEFASDSSLL 97
             DQL  +   P+    A  SN  S    E+F    +WDEL ++VE A D  L+
Sbjct: 253 HLDQLSHIAQPPSM---ASSSNMSSPYIHEMFTHG-DWDELRSVVECAFDPFLM 302


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