BLASTX nr result

ID: Coptis25_contig00020901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020901
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002530545.1| protein binding protein, putative [Ricinus c...    85   7e-15
ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
emb|CBI30079.3| unnamed protein product [Vitis vinifera]               73   2e-11
dbj|BAF80453.1| DC1 domain containing protein [Nicotiana tabacum]      73   3e-11

>ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|222858396|gb|EEE95943.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 38/74 (51%), Positives = 47/74 (63%)
 Frame = -3

Query: 226 GKLEYDQSIEHFSHEHPLELSKFKELPQNFPSTCSGCNLSCSDWLYTCKACKYVLHILCS 47
           GKL +D  I HFSH HPLELS  + L  N   +CS CNL  S W+Y+CK C + LHI C+
Sbjct: 2   GKLNHDPYINHFSHPHPLELSNAQSLYMN---SCSACNLQPSGWMYSCKPCNFTLHISCT 58

Query: 46  QVPQFLHHPADPNH 5
           Q+P  + HP  P H
Sbjct: 59  QMPTLITHPCHPIH 72


>ref|XP_002530545.1| protein binding protein, putative [Ricinus communis]
           gi|223529907|gb|EEF31836.1| protein binding protein,
           putative [Ricinus communis]
          Length = 324

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = -3

Query: 226 GKLEYDQSIEHFSHEHPLELSKFKELPQNFPST-CSGCNLSCSDWLYTCKACKYVLHILC 50
           G+L +D  I HFSH HPL LS    L  ++P T CS C L  S W+Y+C  C + LH+ C
Sbjct: 2   GRLSHDPCIHHFSHPHPLHLSN---LQSSYPITHCSACQLESSGWMYSCNPCNFTLHLSC 58

Query: 49  SQVPQFLHHPADPNH 5
           SQ+P  + HP+ PNH
Sbjct: 59  SQLPSLITHPSHPNH 73


>ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|222872676|gb|EEF09807.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = -3

Query: 211 DQSIEHFSHEHPLELSKFKELPQNFPSTCSGCNLSCSDWLYTCKACKYVLHILCSQVPQF 32
           + +I+HFSH HPL+LS ++       ++CSGC L  S W+Y C  C Y LH+ CSQ+PQ 
Sbjct: 9   EAAIQHFSHPHPLQLSNYQPQQTLCLASCSGCKLKISGWIYACTQCNYFLHVSCSQMPQQ 68

Query: 31  LHHPADPNH 5
           + HP   NH
Sbjct: 69  ITHPYHQNH 77


>emb|CBI30079.3| unnamed protein product [Vitis vinifera]
          Length = 128

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
 Frame = -3

Query: 226 GKLEYDQ--SIEHFSHEHPLELSKFKELPQNFPSTCSGCNLSC---SDWLYTCKACKYVL 62
           GKL  ++     HFSHEHPLEL+     PQ   + CSGC +S     D+ YTCK C Y L
Sbjct: 2   GKLSIEEMRDFSHFSHEHPLELTNL--WPQGH-TVCSGCKMSIVAGKDY-YTCKPCSYYL 57

Query: 61  HILCSQVPQFLHHPADPNH 5
           H  C  +P+ + HPADPNH
Sbjct: 58  HSTCYNLPRLIQHPADPNH 76


>dbj|BAF80453.1| DC1 domain containing protein [Nicotiana tabacum]
          Length = 212

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 31/71 (43%), Positives = 40/71 (56%)
 Frame = -3

Query: 217 EYDQSIEHFSHEHPLELSKFKELPQNFPSTCSGCNLSCSDWLYTCKACKYVLHILCSQVP 38
           E   +I HFSH HPLEL   +    +    CSGC +     +YTCK+C + LH  CSQ+P
Sbjct: 10  ESKNTINHFSHPHPLELITNQNFASSSSQLCSGCKIQAIGSIYTCKSCNFFLHTECSQMP 69

Query: 37  QFLHHPADPNH 5
           Q + HP D  H
Sbjct: 70  QQITHPFDKEH 80


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