BLASTX nr result

ID: Coptis25_contig00020900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020900
         (1536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542761.1| PREDICTED: probable LRR receptor-like serine...   457   e-126
emb|CBI35687.3| unnamed protein product [Vitis vinifera]              451   e-124
ref|XP_003635271.1| PREDICTED: probable LRR receptor-like serine...   451   e-124
ref|XP_003529313.1| PREDICTED: probable LRR receptor-like serine...   449   e-124
ref|XP_002329809.1| predicted protein [Populus trichocarpa] gi|2...   449   e-124

>ref|XP_003542761.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g56140-like [Glycine max]
          Length = 367

 Score =  457 bits (1177), Expect = e-126
 Identities = 226/338 (66%), Positives = 270/338 (79%), Gaps = 5/338 (1%)
 Frame = -2

Query: 1310 MSCNCFSASIFDRKKK-----SDIDEPLPGKIKLFTYNELSTATNHFHASNKIGRGGFGT 1146
            MSC CF AS   RK+      ++ID      +K F+  +L  AT++++ S K+GRGGFGT
Sbjct: 1    MSCGCFGASTLKRKRNPSRTPNEIDGFPLDNVKNFSDKDLRLATDNYNPSKKLGRGGFGT 60

Query: 1145 VYKGILKSGRQVAVKALSAESKQGVHEFLTEIDVVTNVKHVNLVELIGCCVQGKNRVLVY 966
            VY+G LK+G+QVAVK LSA SKQGV EFLTEI  ++NVKH NLVEL+GCCVQ  NR+LVY
Sbjct: 61   VYQGTLKNGQQVAVKTLSAGSKQGVREFLTEIKTISNVKHPNLVELVGCCVQEPNRILVY 120

Query: 965  EYVENNSLDRALLGPKRNTIKMDWSKRSAICLGTARGLAFLHEELEPPIVHRDIKASNIL 786
            EYVENNSLDRALLGP+ + I++DW KRSAIC+GTARGLAFLHEEL P IVHRDIKASNIL
Sbjct: 121  EYVENNSLDRALLGPRSSNIRLDWRKRSAICMGTARGLAFLHEELVPHIVHRDIKASNIL 180

Query: 785  LTEEFVPKIGDFGLAKFFPENITHISTRVAGTTGYLAPEYAQRGQLTKKADVYSFGVLIL 606
            L  +F PKIGDFGLAK FP++ITHISTR+AGTTGYLAPEYA  GQLT KADVYSFGVLIL
Sbjct: 181  LDRDFKPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYAMGGQLTMKADVYSFGVLIL 240

Query: 605  EIVSGRSSAKENWGGTQKLLLEWTWQLYKXXXXXXXXXXXXXEYPQDEVVRYIKVALFCT 426
            EI+SG+SSA+ NWGG+ K LLEW W LY+             E+P++EV+RY+KVA FCT
Sbjct: 241  EIISGKSSARTNWGGSNKFLLEWAWNLYEEGKLLELVDPDMVEFPEEEVIRYMKVAFFCT 300

Query: 425  QAAANRRPSMTQVVVMLSRNIRLNEQELTAPGFFEDGG 312
            QAAA+RRP M+QVV MLS+N+RLNE++LTAPG F+D G
Sbjct: 301  QAAASRRPMMSQVVDMLSKNMRLNEKQLTAPGLFQDSG 338


>emb|CBI35687.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  451 bits (1161), Expect = e-124
 Identities = 236/375 (62%), Positives = 281/375 (74%), Gaps = 5/375 (1%)
 Frame = -2

Query: 1316 TDMSCNCFSASIFDRKKKSD-----IDEPLPGKIKLFTYNELSTATNHFHASNKIGRGGF 1152
            T MSC+CF  S  D K K +     ID  L  K K  ++NEL  AT++FH S+KIGRGGF
Sbjct: 76   TVMSCSCFGVSTADSKGKGNRASQKIDGNLLEKTKQISFNELKKATDNFHPSSKIGRGGF 135

Query: 1151 GTVYKGILKSGRQVAVKALSAESKQGVHEFLTEIDVVTNVKHVNLVELIGCCVQGKNRVL 972
            GTVYKG LK+GR+VAVK LS  SKQG+ EFLTEI+ ++NV+H NLVELIGCCV G N++L
Sbjct: 136  GTVYKGTLKNGREVAVKMLSTSSKQGLREFLTEINTISNVRHPNLVELIGCCVHGNNKIL 195

Query: 971  VYEYVENNSLDRALLGPKRNTIKMDWSKRSAICLGTARGLAFLHEELEPPIVHRDIKASN 792
            VYEYVENNS+D+ LLG K   I +DW KRSAIC+GTARGLAFLHEEL P IVHRDIKASN
Sbjct: 196  VYEYVENNSIDQVLLGHK---IILDWGKRSAICMGTARGLAFLHEELVPHIVHRDIKASN 252

Query: 791  ILLTEEFVPKIGDFGLAKFFPENITHISTRVAGTTGYLAPEYAQRGQLTKKADVYSFGVL 612
            ILL ++F PKIGDFGLAK FP++ITHISTR+AGTTGYLAPEYA  GQLT KADVYSFGVL
Sbjct: 253  ILLEKDFSPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYALGGQLTMKADVYSFGVL 312

Query: 611  ILEIVSGRSSAKENWGGTQKLLLEWTWQLYKXXXXXXXXXXXXXEYPQDEVVRYIKVALF 432
            +LEI+SG++S++ N+GG+QK LLEW WQL+              E+P++EV+RY KVA F
Sbjct: 313  VLEIISGKTSSQANFGGSQKFLLEWAWQLHIEGRFLELVDPELVEFPEEEVMRYAKVAFF 372

Query: 431  CTQAAANRRPSMTQVVVMLSRNIRLNEQELTAPGFFEDGGLXXXXXXXXXXXXXXXXXSQ 252
            CTQAAA+RRP M+QVV MLSRNIRLNE+ELTAPG+F+                     S 
Sbjct: 373  CTQAAASRRPLMSQVVDMLSRNIRLNEKELTAPGYFQTS------DDCSRKPSSTDSASY 426

Query: 251  PIISFPDTITEITPR 207
             + S P TITE+TPR
Sbjct: 427  QMSSVPVTITEVTPR 441


>ref|XP_003635271.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g56140-like [Vitis vinifera]
          Length = 364

 Score =  451 bits (1159), Expect = e-124
 Identities = 235/373 (63%), Positives = 280/373 (75%), Gaps = 5/373 (1%)
 Frame = -2

Query: 1310 MSCNCFSASIFDRKKKSD-----IDEPLPGKIKLFTYNELSTATNHFHASNKIGRGGFGT 1146
            MSC+CF  S  D K K +     ID  L  K K  ++NEL  AT++FH S+KIGRGGFGT
Sbjct: 1    MSCSCFGVSTADSKGKGNRASQKIDGNLLEKTKQISFNELKKATDNFHPSSKIGRGGFGT 60

Query: 1145 VYKGILKSGRQVAVKALSAESKQGVHEFLTEIDVVTNVKHVNLVELIGCCVQGKNRVLVY 966
            VYKG LK+GR+VAVK LS  SKQG+ EFLTEI+ ++NV+H NLVELIGCCV G N++LVY
Sbjct: 61   VYKGTLKNGREVAVKMLSTSSKQGLREFLTEINTISNVRHPNLVELIGCCVHGNNKILVY 120

Query: 965  EYVENNSLDRALLGPKRNTIKMDWSKRSAICLGTARGLAFLHEELEPPIVHRDIKASNIL 786
            EYVENNS+D+ LLG K   I +DW KRSAIC+GTARGLAFLHEEL P IVHRDIKASNIL
Sbjct: 121  EYVENNSIDQVLLGHK---IILDWGKRSAICMGTARGLAFLHEELVPHIVHRDIKASNIL 177

Query: 785  LTEEFVPKIGDFGLAKFFPENITHISTRVAGTTGYLAPEYAQRGQLTKKADVYSFGVLIL 606
            L ++F PKIGDFGLAK FP++ITHISTR+AGTTGYLAPEYA  GQLT KADVYSFGVL+L
Sbjct: 178  LEKDFSPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYALGGQLTMKADVYSFGVLVL 237

Query: 605  EIVSGRSSAKENWGGTQKLLLEWTWQLYKXXXXXXXXXXXXXEYPQDEVVRYIKVALFCT 426
            EI+SG++S++ N+GG+QK LLEW WQL+              E+P++EV+RY KVA FCT
Sbjct: 238  EIISGKTSSQANFGGSQKFLLEWAWQLHIEGRFLELVDPELVEFPEEEVMRYAKVAFFCT 297

Query: 425  QAAANRRPSMTQVVVMLSRNIRLNEQELTAPGFFEDGGLXXXXXXXXXXXXXXXXXSQPI 246
            QAAA+RRP M+QVV MLSRNIRLNE+ELTAPG+F+                     S  +
Sbjct: 298  QAAASRRPLMSQVVDMLSRNIRLNEKELTAPGYFQTS------DDCSRKPSSTDSASYQM 351

Query: 245  ISFPDTITEITPR 207
             S P TITE+TPR
Sbjct: 352  SSVPVTITEVTPR 364


>ref|XP_003529313.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g53430-like [Glycine max]
          Length = 367

 Score =  449 bits (1156), Expect = e-124
 Identities = 224/338 (66%), Positives = 267/338 (78%), Gaps = 5/338 (1%)
 Frame = -2

Query: 1310 MSCNCFSASIFDRKKK-SDIDEPLPG----KIKLFTYNELSTATNHFHASNKIGRGGFGT 1146
            MSC CF AS   +K+  SD    + G     +K F+  +L  AT++++ S K+GRGGFG 
Sbjct: 1    MSCGCFGASTLKKKRNPSDTPNEIDGFPLDNVKNFSDKDLRLATDNYNPSKKLGRGGFGI 60

Query: 1145 VYKGILKSGRQVAVKALSAESKQGVHEFLTEIDVVTNVKHVNLVELIGCCVQGKNRVLVY 966
            VY+G LK+GRQVAVK LSA SKQGV EFLTEI  ++NVKH NLVEL+GCCVQ  NR+LVY
Sbjct: 61   VYQGTLKNGRQVAVKTLSAGSKQGVREFLTEIKTISNVKHPNLVELVGCCVQEPNRILVY 120

Query: 965  EYVENNSLDRALLGPKRNTIKMDWSKRSAICLGTARGLAFLHEELEPPIVHRDIKASNIL 786
            E+VENNSLDRALLG + + I++DW KRSAIC+GTARGLAFLHEE  P IVHRDIKASNIL
Sbjct: 121  EFVENNSLDRALLGSRGSNIRLDWRKRSAICMGTARGLAFLHEEHVPHIVHRDIKASNIL 180

Query: 785  LTEEFVPKIGDFGLAKFFPENITHISTRVAGTTGYLAPEYAQRGQLTKKADVYSFGVLIL 606
            L  +F PKIGDFGLAK FP++ITHISTR+AGTTGYLAPEYA  GQLT KADVYSFGVLIL
Sbjct: 181  LDRDFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYAMGGQLTMKADVYSFGVLIL 240

Query: 605  EIVSGRSSAKENWGGTQKLLLEWTWQLYKXXXXXXXXXXXXXEYPQDEVVRYIKVALFCT 426
            EI+SG+SSA+ NWGG+ K LLEW WQLY+             E+P+ EV+RY+KVA FCT
Sbjct: 241  EIISGKSSARTNWGGSNKFLLEWAWQLYEEGKLLELVDPDMVEFPEKEVIRYMKVAFFCT 300

Query: 425  QAAANRRPSMTQVVVMLSRNIRLNEQELTAPGFFEDGG 312
            QAAA+RRP M+QVV MLS+N+RLNE++LTAPG F+D G
Sbjct: 301  QAAASRRPMMSQVVDMLSKNMRLNEKQLTAPGLFQDSG 338


>ref|XP_002329809.1| predicted protein [Populus trichocarpa] gi|222870871|gb|EEF08002.1|
            predicted protein [Populus trichocarpa]
          Length = 310

 Score =  449 bits (1155), Expect = e-124
 Identities = 223/304 (73%), Positives = 252/304 (82%)
 Frame = -2

Query: 1232 IKLFTYNELSTATNHFHASNKIGRGGFGTVYKGILKSGRQVAVKALSAESKQGVHEFLTE 1053
            I   +Y EL +AT++FH SNKIGRGGFGTVYKG LKSG QVAVK LSA+S QGV EFL E
Sbjct: 7    INHLSYKELRSATDNFHTSNKIGRGGFGTVYKGTLKSGTQVAVKTLSAQSNQGVQEFLNE 66

Query: 1052 IDVVTNVKHVNLVELIGCCVQGKNRVLVYEYVENNSLDRALLGPKRNTIKMDWSKRSAIC 873
            I  ++ VKH NLVELIGCC QG NR+LVYEYVENNSLDRALLG +   IK+DW +RSAIC
Sbjct: 67   IKTISKVKHPNLVELIGCCAQGSNRILVYEYVENNSLDRALLGSRSTDIKLDWGRRSAIC 126

Query: 872  LGTARGLAFLHEELEPPIVHRDIKASNILLTEEFVPKIGDFGLAKFFPENITHISTRVAG 693
            LG ARGL FLH+E+ P IVHRDIKASNILL ++F PKIGDFGLAK FP+NITHISTR+AG
Sbjct: 127  LGIARGLDFLHKEVVPHIVHRDIKASNILLDKDFNPKIGDFGLAKLFPDNITHISTRIAG 186

Query: 692  TTGYLAPEYAQRGQLTKKADVYSFGVLILEIVSGRSSAKENWGGTQKLLLEWTWQLYKXX 513
            TTGYLAPEYA  GQLT KADVYSFGVLILEIVSGRSSAK +WGGTQKLLLEW WQL++  
Sbjct: 187  TTGYLAPEYALGGQLTMKADVYSFGVLILEIVSGRSSAKPSWGGTQKLLLEWAWQLHEEG 246

Query: 512  XXXXXXXXXXXEYPQDEVVRYIKVALFCTQAAANRRPSMTQVVVMLSRNIRLNEQELTAP 333
                       E+P++EV+RYIKVA FCTQ+AANRRP MTQVV MLSR I+LN++ELTAP
Sbjct: 247  KHLELVDPEMGEFPEEEVIRYIKVAFFCTQSAANRRPIMTQVVDMLSRQIQLNDKELTAP 306

Query: 332  GFFE 321
            GFF+
Sbjct: 307  GFFQ 310


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