BLASTX nr result

ID: Coptis25_contig00020891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020891
         (1035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276574.1| PREDICTED: partner of Y14 and mago-like [Vit...   143   6e-32
emb|CAN63437.1| hypothetical protein VITISV_043015 [Vitis vinife...   143   6e-32
ref|XP_002528618.1| protein with unknown function [Ricinus commu...   117   4e-24
ref|XP_003593095.1| Partner of Y14 and mago A [Medicago truncatu...   117   6e-24
gb|ABK23679.1| unknown [Picea sitchensis]                             111   3e-22

>ref|XP_002276574.1| PREDICTED: partner of Y14 and mago-like [Vitis vinifera]
          Length = 236

 Score =  143 bits (361), Expect = 6e-32
 Identities = 93/204 (45%), Positives = 106/204 (51%), Gaps = 5/204 (2%)
 Frame = +3

Query: 102 RVLAATRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALLKKGM--PDVPPGYDPELDAKP 275
           R+LA TRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGAL +K M   + PPGYDP  DAKP
Sbjct: 30  RLLAPTRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALWRKEMASQEGPPGYDPPTDAKP 89

Query: 276 XXXXXXXXXXXXXXXXXXXXXXXXDISFEKSVEPKNREVLSPKVGIHNSEVIESVACQMN 455
                                   ++      E     VLS +   H SE +ESVA QMN
Sbjct: 90  KTKSVKRNERKKEKRLQAALDKGKNLEQMVDGEVNQDGVLSAEDVNHGSEFVESVASQMN 149

Query: 456 TLSVSENYTTVAPMPDSTEGSNTG---TXXXXXXXXXXXXXXXXEAQQQKTERGXXXXXX 626
            L+V+EN TTV P  +S E  N G                    EAQQQK  +       
Sbjct: 150 ELTVTENPTTVTPPSESIECLNPGGAAPDIDKRIRALKKKIRLTEAQQQKASQQEMKPEQ 209

Query: 627 XXXXXXXXDWRKELKLMEDKKAEL 698
                    W+KELKL+EDKKAEL
Sbjct: 210 LDKMMKLEGWQKELKLLEDKKAEL 233


>emb|CAN63437.1| hypothetical protein VITISV_043015 [Vitis vinifera]
           gi|298204603|emb|CBI23878.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  143 bits (361), Expect = 6e-32
 Identities = 93/204 (45%), Positives = 106/204 (51%), Gaps = 5/204 (2%)
 Frame = +3

Query: 102 RVLAATRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALLKKGM--PDVPPGYDPELDAKP 275
           R+LA TRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGAL +K M   + PPGYDP  DAKP
Sbjct: 28  RLLAPTRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALWRKEMASQEGPPGYDPPTDAKP 87

Query: 276 XXXXXXXXXXXXXXXXXXXXXXXXDISFEKSVEPKNREVLSPKVGIHNSEVIESVACQMN 455
                                   ++      E     VLS +   H SE +ESVA QMN
Sbjct: 88  KTKSVKRNERKKEKRLQAALDKGKNLEQMVDGEVNQDGVLSAEDVNHGSEFVESVASQMN 147

Query: 456 TLSVSENYTTVAPMPDSTEGSNTG---TXXXXXXXXXXXXXXXXEAQQQKTERGXXXXXX 626
            L+V+EN TTV P  +S E  N G                    EAQQQK  +       
Sbjct: 148 ELTVTENPTTVTPPSESIECLNPGGAAPDIDKRIRALKKKIRLTEAQQQKASQQEMKPEQ 207

Query: 627 XXXXXXXXDWRKELKLMEDKKAEL 698
                    W+KELKL+EDKKAEL
Sbjct: 208 LDKMMKLEGWQKELKLLEDKKAEL 231


>ref|XP_002528618.1| protein with unknown function [Ricinus communis]
           gi|223531963|gb|EEF33776.1| protein with unknown
           function [Ricinus communis]
          Length = 252

 Score =  117 bits (294), Expect = 4e-24
 Identities = 82/200 (41%), Positives = 98/200 (49%), Gaps = 6/200 (3%)
 Frame = +3

Query: 102 RVLAATRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALLKKGMPD---VPPGYDPELDAK 272
           R+LA TRRPDGTLRKPIRIRAGYVPQDEVAIYQS+GAL KK M     VPPGYDP +DAK
Sbjct: 31  RILAPTRRPDGTLRKPIRIRAGYVPQDEVAIYQSRGALWKKEMQSLHVVPPGYDPGMDAK 90

Query: 273 PXXXXXXXXXXXXXXXXXXXXXXXXDISFEKSVEPKNREVLSPKVGIHNSEVIESVACQM 452
           P                        ++    + + K REVL  +   H SE ++S+  QM
Sbjct: 91  PKTKSVKRNERKKEKRLQAALEKGKNLDASAAGDMK-REVLPDEDVGHASESVKSLTSQM 149

Query: 453 NTLSVSENYTTVAPMPDSTE---GSNTGTXXXXXXXXXXXXXXXXEAQQQKTERGXXXXX 623
           N L VS N     P  DSTE    + +                  EAQQQK         
Sbjct: 150 NELDVSANPVLSIP-GDSTETLDPNASSQDIDKRIRALKKKIRQAEAQQQKATSQDMKPE 208

Query: 624 XXXXXXXXXDWRKELKLMED 683
                     W +ELK++ED
Sbjct: 209 QLEKLAKLEGWHQELKILED 228


>ref|XP_003593095.1| Partner of Y14 and mago A [Medicago truncatula]
           gi|124360428|gb|ABN08438.1| ENSANGP00000004563 , related
           [Medicago truncatula] gi|355482143|gb|AES63346.1|
           Partner of Y14 and mago A [Medicago truncatula]
          Length = 218

 Score =  117 bits (292), Expect = 6e-24
 Identities = 79/204 (38%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
 Frame = +3

Query: 102 RVLAATRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALLKKGMPD--VPPGYDPELDAKP 275
           R+LA TRRPDGTLRKP+RIRAGY PQDEVAIYQ K AL++K M     PPGYDP+LD+KP
Sbjct: 20  RILAPTRRPDGTLRKPVRIRAGYTPQDEVAIYQPKPALMRKEMASHIGPPGYDPQLDSKP 79

Query: 276 XXXXXXXXXXXXXXXXXXXXXXXXDISFEKSVEPKNREVLSPKVGIHNSEVIESVACQMN 455
                                   + + E +V   +R+     V + NS  + S+  Q+N
Sbjct: 80  ----KTKAVKRNERKKEKKRLQAKETNLEPTVVEDSRK--QENVIVENS--VHSLTSQIN 131

Query: 456 TLSVSENYTTVAPMPDSTEGS---NTGTXXXXXXXXXXXXXXXXEAQQQKTERGXXXXXX 626
            L+VS + + V P  +S E S    +                  EA Q+KT         
Sbjct: 132 ELAVSGDTSIVTPTTNSVEASEPIGSAQDLDKRIRALKKKIRLTEALQEKTAEQDLKPEQ 191

Query: 627 XXXXXXXXDWRKELKLMEDKKAEL 698
                   DWRKELK +EDKKAE+
Sbjct: 192 LEKLAKLEDWRKELKQLEDKKAEI 215


>gb|ABK23679.1| unknown [Picea sitchensis]
          Length = 228

 Score =  111 bits (278), Expect = 3e-22
 Identities = 73/203 (35%), Positives = 99/203 (48%), Gaps = 2/203 (0%)
 Frame = +3

Query: 102 RVLAATRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALLKKGMPDVPPGYDPELDAKPXX 281
           R++A TRRPDGTLRKPIRIRAGYVPQ+EVAIYQSKGALL++GMP+VPPGYDP +++KP  
Sbjct: 30  RIVAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQSKGALLRRGMPEVPPGYDPLVESKPKT 89

Query: 282 XXXXXXXXXXXXXXXXXXXXXXDISFEKSVEPKNREVLSPKVGIHNSEVIESVACQMNTL 461
                                     + S    N +  + +   +    +E+VA QM +L
Sbjct: 90  KSAKRNERRKEKKQQASIASSTSEKGQASENTVNGQAAATENRANRDPDVEAVAQQMGSL 149

Query: 462 SVSENYTTVAPMPDSTEGSNTGTXXXXXXXXXXXXXXXXEAQQQKT--ERGXXXXXXXXX 635
           +V    T+   +  S+E +N                      QQ +    G         
Sbjct: 150 TV----TSEVSVSVSSEQANPERMDLDKRIRALKKKIRLTESQQASMAGEGTLNPEQREK 205

Query: 636 XXXXXDWRKELKLMEDKKAELPS 704
                 WRKELK +E+K+  L S
Sbjct: 206 LAKLDTWRKELKDLEEKRMALRS 228


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