BLASTX nr result

ID: Coptis25_contig00020886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020886
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321119.1| predicted protein [Populus trichocarpa] gi|2...   164   2e-38
emb|CBI39152.3| unnamed protein product [Vitis vinifera]              160   3e-37
ref|XP_002267730.1| PREDICTED: mitochondrial import inner membra...   160   4e-37
ref|XP_003548099.1| PREDICTED: mitochondrial import inner membra...   154   3e-35
ref|NP_001235734.1| uncharacterized protein LOC100527414 precurs...   153   4e-35

>ref|XP_002321119.1| predicted protein [Populus trichocarpa] gi|222861892|gb|EEE99434.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  164 bits (416), Expect = 2e-38
 Identities = 83/112 (74%), Positives = 98/112 (87%), Gaps = 1/112 (0%)
 Frame = +3

Query: 183 MAGRLLGQLIVMGAGILGRAVFKAYRQALSNASKSGVAQETIHNTIRRGIKPMTEQEARD 362
           MAG++L  LIVMG+ ILGRA  +AYRQAL+NASKSGVAQET+ NTIRRG K MTEQEAR 
Sbjct: 1   MAGKILANLIVMGSAILGRAFIQAYRQALANASKSGVAQETLQNTIRRGSKVMTEQEARQ 60

Query: 363 ILGVTESSSWEEILQKYNTLFERNA-NGSFYLQSKIQKAKEYLEAANQGKGQ 515
           ILGVTE +SWEEIL+KY+TLFERN+ NGSFY+QSK+ +AKE LEA +QGKG+
Sbjct: 61  ILGVTEETSWEEILKKYDTLFERNSKNGSFYIQSKVHRAKECLEAVHQGKGE 112


>emb|CBI39152.3| unnamed protein product [Vitis vinifera]
          Length = 253

 Score =  160 bits (406), Expect = 3e-37
 Identities = 82/113 (72%), Positives = 95/113 (84%), Gaps = 1/113 (0%)
 Frame = +3

Query: 180 IMAGRLLGQLIVMGAGILGRAVFKAYRQALSNASKSGVAQETIHNTIRRGIKPMTEQEAR 359
           + A ++L  LIVMG+GIL RA+ +AYRQAL+NASKSGVAQETI NT+RRG K M EQEAR
Sbjct: 137 VQASKILANLIVMGSGILARALVQAYRQALANASKSGVAQETIQNTVRRGSKAMMEQEAR 196

Query: 360 DILGVTESSSWEEILQKYNTLFERNA-NGSFYLQSKIQKAKEYLEAANQGKGQ 515
            ILGVTE S+WEEILQKY+TLFERNA NGSFYLQSK+ +AKE LEA +QG  Q
Sbjct: 197 QILGVTEQSTWEEILQKYDTLFERNAKNGSFYLQSKVHRAKECLEAVHQGNSQ 249


>ref|XP_002267730.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim16-like [Vitis vinifera]
          Length = 120

 Score =  160 bits (404), Expect = 4e-37
 Identities = 83/115 (72%), Positives = 95/115 (82%), Gaps = 1/115 (0%)
 Frame = +3

Query: 174 AIIMAGRLLGQLIVMGAGILGRAVFKAYRQALSNASKSGVAQETIHNTIRRGIKPMTEQE 353
           A   A ++L  LIVMG+GIL RA+ +AYRQAL+NASKSGVAQETI NT+RRG K M EQE
Sbjct: 2   ATASASKILANLIVMGSGILARALVQAYRQALANASKSGVAQETIQNTVRRGSKAMMEQE 61

Query: 354 ARDILGVTESSSWEEILQKYNTLFERNA-NGSFYLQSKIQKAKEYLEAANQGKGQ 515
           AR ILGVTE S+WEEILQKY+TLFERNA NGSFYLQSK+ +AKE LEA +QG  Q
Sbjct: 62  ARQILGVTEQSTWEEILQKYDTLFERNAKNGSFYLQSKVHRAKECLEAVHQGNSQ 116


>ref|XP_003548099.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim-16-like [Glycine max]
          Length = 116

 Score =  154 bits (388), Expect = 3e-35
 Identities = 80/112 (71%), Positives = 91/112 (81%), Gaps = 1/112 (0%)
 Frame = +3

Query: 183 MAGRLLGQLIVMGAGILGRAVFKAYRQALSNASKSGVAQETIHNTIRRGIKPMTEQEARD 362
           MA ++L  LIVMG GIL RAV +AYRQAL+NASK+GVAQETI NTIRR  K MTEQEAR 
Sbjct: 1   MAAKILANLIVMGGGILARAVVQAYRQALTNASKNGVAQETIQNTIRRASKVMTEQEARR 60

Query: 363 ILGVTESSSWEEILQKYNTLFERNA-NGSFYLQSKIQKAKEYLEAANQGKGQ 515
           ILGVTE + WEEI++KY+ LFE NA NGSFYLQSK+ +AKE LEA  QGK Q
Sbjct: 61  ILGVTEETPWEEIIKKYDNLFENNAKNGSFYLQSKVHRAKECLEAVQQGKSQ 112


>ref|NP_001235734.1| uncharacterized protein LOC100527414 precursor [Glycine max]
           gi|255632292|gb|ACU16504.1| unknown [Glycine max]
          Length = 116

 Score =  153 bits (387), Expect = 4e-35
 Identities = 79/112 (70%), Positives = 91/112 (81%), Gaps = 1/112 (0%)
 Frame = +3

Query: 183 MAGRLLGQLIVMGAGILGRAVFKAYRQALSNASKSGVAQETIHNTIRRGIKPMTEQEARD 362
           MA ++L  LIVMG GIL RAV +AYRQAL+NASK+GVAQETI NT+RR  K MTEQEAR 
Sbjct: 1   MAAKILANLIVMGGGILARAVVQAYRQALTNASKNGVAQETIQNTMRRASKVMTEQEARQ 60

Query: 363 ILGVTESSSWEEILQKYNTLFERNA-NGSFYLQSKIQKAKEYLEAANQGKGQ 515
           ILGVTE + WEEI++KY+ LFE NA NGSFYLQSK+ +AKE LEA  QGK Q
Sbjct: 61  ILGVTEETPWEEIIKKYDNLFENNAKNGSFYLQSKVHRAKECLEAVQQGKSQ 112


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