BLASTX nr result

ID: Coptis25_contig00020879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020879
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002440532.1| hypothetical protein SORBIDRAFT_09g002650 [S...    79   4e-13
ref|XP_003632414.1| PREDICTED: uncharacterized protein LOC100855...    79   5e-13
emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]    79   5e-13
ref|XP_002277366.2| PREDICTED: uncharacterized protein LOC100266...    77   2e-12
emb|CBI39618.3| unnamed protein product [Vitis vinifera]               77   2e-12

>ref|XP_002440532.1| hypothetical protein SORBIDRAFT_09g002650 [Sorghum bicolor]
           gi|241945817|gb|EES18962.1| hypothetical protein
           SORBIDRAFT_09g002650 [Sorghum bicolor]
          Length = 447

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/86 (45%), Positives = 54/86 (62%)
 Frame = -2

Query: 262 QGSWFTAAIISPSLNNDNKFLVQYHTLLEENGVDPLEEYVHVSHLRPGQPKETTPTTVFK 83
           +G+WF A I+ P     +KFLV+Y TL +++   PL+E V   H+RP  P E   +  FK
Sbjct: 327 RGAWFEATIVKPV---GSKFLVEYATLKDDDDTKPLKETVEARHIRPCPP-EIPVSDGFK 382

Query: 82  LNQKVDVYCNDGWWKGVIVKVLEESK 5
           L  +VD +CNDGWW GV+ KVL E +
Sbjct: 383 LLDEVDAFCNDGWWVGVVSKVLGEKR 408


>ref|XP_003632414.1| PREDICTED: uncharacterized protein LOC100855416 [Vitis vinifera]
          Length = 147

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
 Frame = -2

Query: 262 QGSWFTAAIISPSLNNDNKFLVQYHTLL-EENGVDPLEEYVHVSHLRPGQPKETTPTTVF 86
           +GSW+TA ++ P      K  V+YHTL+ EE+   PL E V    +RP  P+E      F
Sbjct: 24  RGSWYTATVLRPVTKKTKKIYVEYHTLMSEEDDSKPLRESVDAILVRPYPPREVGRR--F 81

Query: 85  KLNQKVDVYCNDGWWKGVIVKVLEESKY 2
           KL ++VD + +DGWW+GV+ +VLE S+Y
Sbjct: 82  KLMEEVDAFYSDGWWEGVVTQVLENSRY 109


>emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]
          Length = 1348

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
 Frame = -2

Query: 262  QGSWFTAAIISPSLNNDNKFLVQYHTLL-EENGVDPLEEYVHVSHLRPGQPKETTPTTVF 86
            +GSW+TA ++ P      K  V+YHTL+ EE+   PL E V    +RP  P+E      F
Sbjct: 1225 RGSWYTATVLRPVTKKTKKIYVEYHTLMSEEDDSKPLRESVDAILVRPYPPREVGRR--F 1282

Query: 85   KLNQKVDVYCNDGWWKGVIVKVLEESKY 2
            KL ++VD + +DGWW+GV+ +VLE S+Y
Sbjct: 1283 KLMEEVDAFYSDGWWEGVVTQVLENSRY 1310


>ref|XP_002277366.2| PREDICTED: uncharacterized protein LOC100266586 [Vitis vinifera]
          Length = 296

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
 Frame = -2

Query: 262 QGSWFTAAIISPSLNNDNKFLV--QYHTLL-EENGVDPLEEYVHVSHLRPGQPKETTPTT 92
           +G+WF   ++ P     NK LV  +Y T++ +E+G +PL E + V  LRP  P+E + T 
Sbjct: 20  RGAWFAGTVVKPPAKKKNKTLVVVEYKTIMADESGANPLRETMDVLQLRPPPPRERSRT- 78

Query: 91  VFKLNQKVDVYCNDGWWKGVIVKVLEESKY 2
            F+++++VD Y NDGWW+GVI +  E S++
Sbjct: 79  -FQISEEVDAYYNDGWWEGVITEAHENSRF 107



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/87 (41%), Positives = 49/87 (56%)
 Frame = -2

Query: 262 QGSWFTAAIISPSLNNDNKFLVQYHTLLEENGVDPLEEYVHVSHLRPGQPKETTPTTVFK 83
           QG+WF A I+   +   +K +++Y +L  ++  D L E V   H+RP  P ET     F 
Sbjct: 175 QGAWFAATIVK--VIGKDKLMIEYKSLRTDDDTDFLREEVDALHIRP-YPPETVVVDRFN 231

Query: 82  LNQKVDVYCNDGWWKGVIVKVLEESKY 2
           L ++VD   NDGWW GVI KVL  S Y
Sbjct: 232 LLEEVDALYNDGWWVGVISKVLSRSCY 258


>emb|CBI39618.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
 Frame = -2

Query: 262 QGSWFTAAIISPSLNNDNKFLV--QYHTLL-EENGVDPLEEYVHVSHLRPGQPKETTPTT 92
           +G+WF   ++ P     NK LV  +Y T++ +E+G +PL E + V  LRP  P+E + T 
Sbjct: 39  RGAWFAGTVVKPPAKKKNKTLVVVEYKTIMADESGANPLRETMDVLQLRPPPPRERSRT- 97

Query: 91  VFKLNQKVDVYCNDGWWKGVIVKVLEESKY 2
            F+++++VD Y NDGWW+GVI +  E S++
Sbjct: 98  -FQISEEVDAYYNDGWWEGVITEAHENSRF 126



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/87 (41%), Positives = 49/87 (56%)
 Frame = -2

Query: 262 QGSWFTAAIISPSLNNDNKFLVQYHTLLEENGVDPLEEYVHVSHLRPGQPKETTPTTVFK 83
           QG+WF A I+   +   +K +++Y +L  ++  D L E V   H+RP  P ET     F 
Sbjct: 194 QGAWFAATIVK--VIGKDKLMIEYKSLRTDDDTDFLREEVDALHIRP-YPPETVVVDRFN 250

Query: 82  LNQKVDVYCNDGWWKGVIVKVLEESKY 2
           L ++VD   NDGWW GVI KVL  S Y
Sbjct: 251 LLEEVDALYNDGWWVGVISKVLSRSCY 277


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