BLASTX nr result

ID: Coptis25_contig00020877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020877
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591865.1| ABC transporter G family member [Medicago tr...   293   2e-77
ref|XP_003535522.1| PREDICTED: ABC transporter G family member 2...   290   2e-76
ref|XP_003555441.1| PREDICTED: ABC transporter G family member 2...   285   8e-75
emb|CBI31434.3| unnamed protein product [Vitis vinifera]              284   1e-74
ref|XP_002271552.1| PREDICTED: ABC transporter G family member 2...   284   1e-74

>ref|XP_003591865.1| ABC transporter G family member [Medicago truncatula]
            gi|355480913|gb|AES62116.1| ABC transporter G family
            member [Medicago truncatula]
          Length = 1103

 Score =  293 bits (750), Expect = 2e-77
 Identities = 142/192 (73%), Positives = 158/192 (82%), Gaps = 1/192 (0%)
 Frame = -3

Query: 698  LLCKIAALRSFSLDKLIYWRENSSGMSSLAYFLSKDTIDHFNTVIKPLVYLSMFYFFNNP 519
            LLCKIAALRSFSLDKL YWRE+ SGMSSLAYFLSKDT+DHFNTVIKP+VYLSMFYF  NP
Sbjct: 912  LLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTMDHFNTVIKPVVYLSMFYFLTNP 971

Query: 518  RSSFTDNYIVLLCLVYCVTGIAYAFAILLEPGPAQXXXXXXXXXXXXLATQQ-EGRIVKG 342
            RS+FTDNYIVLLCLVYCVTGIAYA +I+ EPG AQ            +ATQQ + +I+K 
Sbjct: 972  RSTFTDNYIVLLCLVYCVTGIAYALSIVFEPGAAQLWSVLLPVVSTLIATQQKDSKILKA 1031

Query: 341  IANLCYPKWALQAFVISNAERYSGVWLITRCGFLFNSSYNLHDWGLCISILVLFGVVSRI 162
            IANLCY KWALQA VI+NAERY GVWLITRCG L  S YNLHDW LCISIL+L GV+ R 
Sbjct: 1032 IANLCYSKWALQALVIANAERYQGVWLITRCGSLLKSGYNLHDWSLCISILILMGVIGRA 1091

Query: 161  MAFLCMITFRKK 126
            +AF CM+TF+KK
Sbjct: 1092 IAFFCMVTFKKK 1103


>ref|XP_003535522.1| PREDICTED: ABC transporter G family member 24-like [Glycine max]
          Length = 1099

 Score =  290 bits (742), Expect = 2e-76
 Identities = 138/192 (71%), Positives = 157/192 (81%), Gaps = 1/192 (0%)
 Frame = -3

Query: 698  LLCKIAALRSFSLDKLIYWRENSSGMSSLAYFLSKDTIDHFNTVIKPLVYLSMFYFFNNP 519
            LLCKIAALRSFSLDKL YWRE+ SGMSSLAYFLSKDTIDHFNT+IKP+VYLSMFYFF NP
Sbjct: 908  LLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDHFNTLIKPVVYLSMFYFFTNP 967

Query: 518  RSSFTDNYIVLLCLVYCVTGIAYAFAILLEPGPAQXXXXXXXXXXXXLATQ-QEGRIVKG 342
            RS+F DNY+VLLCLVYCVTGIAYA +I  EPG AQ            +ATQ ++ +++K 
Sbjct: 968  RSTFADNYVVLLCLVYCVTGIAYALSIFFEPGAAQLWSVLLPVVLTLIATQPKDSKVLKN 1027

Query: 341  IANLCYPKWALQAFVISNAERYSGVWLITRCGFLFNSSYNLHDWGLCISILVLFGVVSRI 162
            IANLCY KWALQA V++NAERY GVWLITRCG L  + YNLHDW LCISIL+L GV+ R 
Sbjct: 1028 IANLCYSKWALQALVVANAERYQGVWLITRCGSLLKTGYNLHDWSLCISILILMGVICRA 1087

Query: 161  MAFLCMITFRKK 126
            +AF CM+TFRKK
Sbjct: 1088 IAFFCMVTFRKK 1099


>ref|XP_003555441.1| PREDICTED: ABC transporter G family member 24-like [Glycine max]
          Length = 1107

 Score =  285 bits (728), Expect = 8e-75
 Identities = 137/192 (71%), Positives = 156/192 (81%), Gaps = 1/192 (0%)
 Frame = -3

Query: 698  LLCKIAALRSFSLDKLIYWRENSSGMSSLAYFLSKDTIDHFNTVIKPLVYLSMFYFFNNP 519
            LLCKIAALRSFSLDKL YWRE+ SGMSSLAYFLSKDTID FNT+IKP+VYLSMFYFF NP
Sbjct: 916  LLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDLFNTLIKPVVYLSMFYFFTNP 975

Query: 518  RSSFTDNYIVLLCLVYCVTGIAYAFAILLEPGPAQXXXXXXXXXXXXLATQ-QEGRIVKG 342
             S+F DNY+VLLCLVYCVTGIAYA +I  EPG AQ            +ATQ ++ +++K 
Sbjct: 976  ISTFADNYVVLLCLVYCVTGIAYALSIFFEPGAAQLWSVLLPVVLTLIATQPKDSKVLKN 1035

Query: 341  IANLCYPKWALQAFVISNAERYSGVWLITRCGFLFNSSYNLHDWGLCISILVLFGVVSRI 162
            IANLCY KWALQA V++NAERY GVWLITRCG L  S YNLHDW LCISIL+L GV++R 
Sbjct: 1036 IANLCYSKWALQALVVANAERYQGVWLITRCGSLLKSGYNLHDWSLCISILILMGVIARA 1095

Query: 161  MAFLCMITFRKK 126
            +AF CM+TFRKK
Sbjct: 1096 IAFFCMVTFRKK 1107


>emb|CBI31434.3| unnamed protein product [Vitis vinifera]
          Length = 1071

 Score =  284 bits (727), Expect = 1e-74
 Identities = 138/192 (71%), Positives = 158/192 (82%), Gaps = 1/192 (0%)
 Frame = -3

Query: 698  LLCKIAALRSFSLDKLIYWRENSSGMSSLAYFLSKDTIDHFNTVIKPLVYLSMFYFFNNP 519
            LLCKIAALRSFSL+KL YWRE++SG+SSLAYFLSKDTID FNT+IKP+VYLSMFYFFNNP
Sbjct: 880  LLCKIAALRSFSLEKLQYWRESASGISSLAYFLSKDTIDLFNTIIKPVVYLSMFYFFNNP 939

Query: 518  RSSFTDNYIVLLCLVYCVTGIAYAFAILLEPGPAQXXXXXXXXXXXXLATQQ-EGRIVKG 342
            RSSF+DNYIVL+CLVYCVTGIAY  AI LEPGPAQ            +AT+  E +I+K 
Sbjct: 940  RSSFSDNYIVLICLVYCVTGIAYMLAIFLEPGPAQLCSVLLPVVLTLIATRTGESKILKN 999

Query: 341  IANLCYPKWALQAFVISNAERYSGVWLITRCGFLFNSSYNLHDWGLCISILVLFGVVSRI 162
            +AN CYPKWAL+AFVI+NAERY GVWLITRCG L  S YNLHDW LCI IL+L G+V R 
Sbjct: 1000 LANFCYPKWALEAFVIANAERYYGVWLITRCGSLLKSGYNLHDWDLCIFILILIGIVCRA 1059

Query: 161  MAFLCMITFRKK 126
            +AF  M+TFR+K
Sbjct: 1060 IAFTGMVTFRRK 1071


>ref|XP_002271552.1| PREDICTED: ABC transporter G family member 28-like isoform 1 [Vitis
            vinifera]
          Length = 1120

 Score =  284 bits (727), Expect = 1e-74
 Identities = 138/192 (71%), Positives = 158/192 (82%), Gaps = 1/192 (0%)
 Frame = -3

Query: 698  LLCKIAALRSFSLDKLIYWRENSSGMSSLAYFLSKDTIDHFNTVIKPLVYLSMFYFFNNP 519
            LLCKIAALRSFSL+KL YWRE++SG+SSLAYFLSKDTID FNT+IKP+VYLSMFYFFNNP
Sbjct: 929  LLCKIAALRSFSLEKLQYWRESASGISSLAYFLSKDTIDLFNTIIKPVVYLSMFYFFNNP 988

Query: 518  RSSFTDNYIVLLCLVYCVTGIAYAFAILLEPGPAQXXXXXXXXXXXXLATQQ-EGRIVKG 342
            RSSF+DNYIVL+CLVYCVTGIAY  AI LEPGPAQ            +AT+  E +I+K 
Sbjct: 989  RSSFSDNYIVLICLVYCVTGIAYMLAIFLEPGPAQLCSVLLPVVLTLIATRTGESKILKN 1048

Query: 341  IANLCYPKWALQAFVISNAERYSGVWLITRCGFLFNSSYNLHDWGLCISILVLFGVVSRI 162
            +AN CYPKWAL+AFVI+NAERY GVWLITRCG L  S YNLHDW LCI IL+L G+V R 
Sbjct: 1049 LANFCYPKWALEAFVIANAERYYGVWLITRCGSLLKSGYNLHDWDLCIFILILIGIVCRA 1108

Query: 161  MAFLCMITFRKK 126
            +AF  M+TFR+K
Sbjct: 1109 IAFTGMVTFRRK 1120


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