BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020874
         (1311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi...   452   e-125
ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|2...   431   e-118
gb|ABK95700.1| unknown [Populus trichocarpa]                          421   e-115
ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PAR...   412   e-112
emb|CBI35579.3| unnamed protein product [Vitis vinifera]              412   e-112

>ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi|223533357|gb|EEF35108.1|
            ribonuclease, putative [Ricinus communis]
          Length = 624

 Score =  452 bits (1163), Expect = e-125
 Identities = 230/438 (52%), Positives = 307/438 (70%), Gaps = 1/438 (0%)
 Frame = +1

Query: 1    GISYLSRVQESAVKQQLENPVSDVYKVKSSLTSSVSDVMFMDRIKSRIQHWKKACKEQSK 180
            GISYLSR QESA + +++NP      V+S+ T  V+D +F+ R +SR+++WK AC + S 
Sbjct: 159  GISYLSRAQESAARVRMKNPFLAKDIVESTSTPGVADSVFVQRTRSRVKNWKNACTDTSS 218

Query: 181  DTDDALVRSIRKLILGGEVYGSRPCLTIDVCNERQVQLVLEMLNKCFDDLVPLVIPEKGG 360
             TD+ALV+S+RKL+LG E Y SRPC+ IDVC+ERQV LV+EML +  DDLVPL++P KGG
Sbjct: 219  -TDEALVKSLRKLVLGLEEYNSRPCINIDVCSERQVHLVIEMLQEFADDLVPLIVPAKGG 277

Query: 361  GSKGVRAVLTRSEEDKNLFKXXXXXXXXXQNKKVRGFREVIDVISASQKPIVAYNCLEEF 540
            G++ VR VLT S+ED++L +         QNKK+RGFREVID+IS S+KP+V++N L + 
Sbjct: 278  GTQAVRVVLTSSKEDRDLLQMELQNLEDEQNKKIRGFREVIDLISGSEKPVVSHNSLNDL 337

Query: 541  SFIHSKFIASLPPSMNEFMCSLRLVFPQILDITHLLKEIGPLKKASNIYAAISNLKRQFF 720
            +FIHSKF+A LPPSM EF CSLRLVFPQ++D+ HL+KEI PLKK +NI  A S LK  FF
Sbjct: 338  AFIHSKFLAPLPPSMEEFTCSLRLVFPQVIDVNHLMKEISPLKKVTNIPMATSYLKNWFF 397

Query: 721  VPLDIEIPHQVQGHENKNYGHNVLFTAYLFAKLSSLLKITPDAQESSSDHQAISINRYAN 900
             P+D+EIP     +E K +GHNV+    LFAKL  +LK+ P++ +S+  + A +I  Y N
Sbjct: 398  APVDMEIPFPAMVNEGKIHGHNVMRICQLFAKLCYILKLAPNSIQSNEKNLASAIEAYVN 457

Query: 901  NFSPCSANLQEPTNED-DIWVNSTMKVSSRDLILLWGFSSGMPARELKSLLHGTHDVFLE 1077
             FSP     QEPT+ED  IW N+T KVS +DL+ LWGF   M A  LKSLL  +H VF E
Sbjct: 458  IFSPYFPGPQEPTDEDVRIWTNNTRKVSCQDLVFLWGFRYRMSAGMLKSLLQQSHKVFSE 517

Query: 1078 DFELRLLDKSCAVVVFKKPHAAEEFLKVIGSGGVGYDALRDLISEGLRAAEYEAYKRVCA 1257
            +F++R +DKSCA+VVF +P  +   L V+         LR+++SEG+RAA Y+ Y RVC 
Sbjct: 518  EFDVRFVDKSCAIVVFWEPGLSNTLLDVLKGSSEIVGPLREMVSEGVRAASYDTYNRVCR 577

Query: 1258 SAILETNLTDSLDKPLAE 1311
              +   NL DSLDK LA+
Sbjct: 578  LGLWHENLADSLDKALAD 595


>ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|222835296|gb|EEE73731.1|
            predicted protein [Populus trichocarpa]
          Length = 626

 Score =  431 bits (1107), Expect = e-118
 Identities = 224/443 (50%), Positives = 301/443 (67%), Gaps = 6/443 (1%)
 Frame = +1

Query: 1    GISYLSRVQESAVKQQLENPVSDVYKVKSSLTSSVSDVMFMDRIKSRIQHWKKACKEQS- 177
            GISYLSR QES  K Q+ NP+      +S+ T SV+D +F++RIKS I++WKKACKE S 
Sbjct: 157  GISYLSREQESTAKIQMGNPILAKNVTESTSTLSVADSVFVERIKSHIKNWKKACKETST 216

Query: 178  ----KDTDDALVRSIRKLILGGEVYGSRPCLTIDVCNERQVQLVLEMLNKCFDDLVPLVI 345
                    DALVRS+RKL+LG E Y SRPC+ IDVC+ERQ QLV+EML +  DD+VPL+I
Sbjct: 217  RKEGNQIQDALVRSLRKLVLGNEEYDSRPCMNIDVCSERQAQLVVEMLQEFADDVVPLII 276

Query: 346  PEKGGGSKGVRAVLTRSEEDKNLFKXXXXXXXXXQNKKVRGFREVIDVISASQKPIVAYN 525
            P KGG  + VR VLT S+EDK+L +           KKVRGFREVID+ISASQKP+V++ 
Sbjct: 277  PAKGGAMQAVRVVLTSSKEDKDLLQGKLQNDEQELKKKVRGFREVIDLISASQKPVVSHG 336

Query: 526  CLEEFSFIHSKFIASLPPSMNEFMCSLRLVFPQILDITHLLKEIGPLKKASNIYAAISNL 705
             L + + IHSKFIA LPP+++EFMCSLRL FP ++D+ HL+KEI PL+K ++I  AIS L
Sbjct: 337  SLNDLTVIHSKFIAPLPPTVDEFMCSLRLAFPLVIDVNHLMKEISPLRKVTSIPVAISQL 396

Query: 706  KRQFFVPLDIEIPHQVQGHENKNYGHNVLFTAYLFAKLSSLLKITPDAQESSSDHQAISI 885
            K +FF P+D+EIP Q   +E+  +G NV+    LFA+L S+LKI P A +S  +  A ++
Sbjct: 397  KNRFFTPIDMEIPCQAMENEDTIHGQNVVKICELFARLCSILKIDPAAVKSDEEKGASAL 456

Query: 886  NRYANNFSP-CSANLQEPTNEDDIWVNSTMKVSSRDLILLWGFSSGMPARELKSLLHGTH 1062
              YAN FSP C+A+ +    E  IW N+T  VS  D++ LWGF   + A  LKSLL  +H
Sbjct: 457  EAYANIFSPFCTASEEPIDGEIKIWTNNTRTVSCEDMVFLWGFGDRVTAGILKSLLQESH 516

Query: 1063 DVFLEDFELRLLDKSCAVVVFKKPHAAEEFLKVIGSGGVGYDALRDLISEGLRAAEYEAY 1242
            + F ++F++RL+D SCA+V+F +    E FL  +         LR+++SEGLRAA YE Y
Sbjct: 517  EAFSKEFDVRLVDNSCAIVIFWQHGLTETFLNTMNKCSDMRGPLREMVSEGLRAAGYETY 576

Query: 1243 KRVCASAILETNLTDSLDKPLAE 1311
             R C   + E++L DSLD+ LA+
Sbjct: 577  NRACRLGLWESSLADSLDRALAD 599


>gb|ABK95700.1| unknown [Populus trichocarpa]
          Length = 454

 Score =  421 bits (1083), Expect = e-115
 Identities = 221/446 (49%), Positives = 298/446 (66%), Gaps = 10/446 (2%)
 Frame = +1

Query: 4    ISYLSRVQESAVKQQLENPVSDVYKVKSSLTSSVSDVMFMDRIKSRIQHWKKACKEQS-- 177
            ISYLSR QES  K Q+ NP+      +S+ T SV+D +F++RIKS I++WKKACKE S  
Sbjct: 8    ISYLSREQESTAKIQMGNPILAKNVTESTSTLSVADSVFVERIKSHIKNWKKACKETSTR 67

Query: 178  ---KDTDDALVRSIRKLILGGEVYGSRPCLTIDVCNERQVQLVLEMLNKCFDDLVPLVIP 348
                   DALVRS+RKL+LG E Y SRPC+ IDVC+ERQ QLV+EML +  DD+VPL+IP
Sbjct: 68   KEGNQIQDALVRSLRKLVLGNEEYDSRPCMNIDVCSERQAQLVVEMLQEFADDVVPLIIP 127

Query: 349  EKGGGSKGVRAVLTRSEEDKNLFKXXXXXXXXXQNKKVRGFREVIDVISASQKPIVAYNC 528
             KGG  + VR VLT S+EDK+L +           KKVRGFREVID+ISASQKP+V++  
Sbjct: 128  AKGGAMQAVRVVLTSSKEDKDLLQGKLQNDEQELKKKVRGFREVIDLISASQKPVVSHGS 187

Query: 529  LEEFSFIHSKFIASLPPSMNEFMCSLRLVFPQILDITHLLKEIGPLKKASNIYAAISNLK 708
            L + + IHSKFIA LPP+++EFMCSLRL FP ++D+ HL+KEI  L+K ++I  AIS LK
Sbjct: 188  LNDLTVIHSKFIAPLPPTVDEFMCSLRLAFPLVIDVNHLMKEISALRKVTSIPVAISQLK 247

Query: 709  RQFFVPLDIEIPHQVQGHENKNYGHNVLFTAYLFAKLSSLLKITPDAQESSSDHQAISIN 888
             +FF P+D+EIP Q   +E+  +G NV+    LFA+L S+LKI P A +S  +  A ++ 
Sbjct: 248  NRFFTPIDMEIPCQAMENEDTIHGQNVVKICELFARLCSILKIDPAAVKSDEEKGASALE 307

Query: 889  RYANNFSPCSANLQEPTNED-----DIWVNSTMKVSSRDLILLWGFSSGMPARELKSLLH 1053
             YAN FSP     +EP + +     + W N+T  VS  DL+ LWGF   + A  LKSLL 
Sbjct: 308  AYANIFSPFCTASEEPIDGEIKIWTNKWTNNTRTVSCEDLVFLWGFGDRVTAGVLKSLLQ 367

Query: 1054 GTHDVFLEDFELRLLDKSCAVVVFKKPHAAEEFLKVIGSGGVGYDALRDLISEGLRAAEY 1233
             +H+ F ++F++RL+D SCA+V+F +    E FL  +         LR+++SEGLRAA Y
Sbjct: 368  ESHEAFSKEFDVRLVDNSCAIVIFWQHGLTETFLNTMNKCSDMRGPLREMVSEGLRAAGY 427

Query: 1234 EAYKRVCASAILETNLTDSLDKPLAE 1311
            E Y R C   + E++L DSLD+ LA+
Sbjct: 428  ETYNRACRLGLWESSLADSLDRALAD 453


>ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 515

 Score =  412 bits (1058), Expect = e-112
 Identities = 208/375 (55%), Positives = 273/375 (72%), Gaps = 1/375 (0%)
 Frame = +1

Query: 190  DALVRSIRKLILGGEVYGSRPCLTIDVCNERQVQLVLEMLNKCFDDLVPLVIPEKGGGSK 369
            +ALV+S+RKLILG E Y SRPC+ +DVC+E QVQLVLE+L + FDDLVPL+IP KGGG++
Sbjct: 111  EALVKSLRKLILGSEEYRSRPCVNLDVCSEHQVQLVLEVLGEFFDDLVPLLIPAKGGGTQ 170

Query: 370  GVRAVLTRSEEDKNLFKXXXXXXXXXQNKKVRGFREVIDVISASQKPIVAYNCLEEFSFI 549
             VR +LT SEEDK+L K         QNK+V GFREVID+ISASQKP+V++N L EF+FI
Sbjct: 171  AVRVILTSSEEDKDLLKRELQDLEEEQNKRVCGFREVIDLISASQKPVVSHNSLNEFAFI 230

Query: 550  HSKFIASLPPSMNEFMCSLRLVFPQILDITHLLKEIGPLKKASNIYAAISNLKRQFFVPL 729
            HSKF++ LPP+M+EFMCSLR+VFP +LD+ HL+KEIGPLKK +N+ AA S LKR+FFVP+
Sbjct: 231  HSKFLSPLPPNMDEFMCSLRMVFPHVLDVNHLMKEIGPLKKVTNLSAAASCLKRRFFVPI 290

Query: 730  DIEIPHQVQGHENKNYGHNVLFTAYLFAKLSSLLKITPDAQESSSDHQAISINRYANNFS 909
            D+EIPHQ   +E+K +GHNVL  ++L A L S+LKITP+  +S   H A ++  YAN F 
Sbjct: 291  DMEIPHQA-SNEDKIHGHNVLKISHLLANLCSILKITPEMIQSDGGHLASALEGYANIFH 349

Query: 910  PCSANLQEPTNED-DIWVNSTMKVSSRDLILLWGFSSGMPARELKSLLHGTHDVFLEDFE 1086
            P S N ++P +    +W + T KVSS  L+ +WGF   M A  LK LL G+H VF E+F+
Sbjct: 350  PHSTNTEDPIDGGIKVWTDDTRKVSSEGLVFIWGFRGRMSAGGLKRLLQGSHSVFSEEFD 409

Query: 1087 LRLLDKSCAVVVFKKPHAAEEFLKVIGSGGVGYDALRDLISEGLRAAEYEAYKRVCASAI 1266
            +R++D SCA+VVF +   ++ FL+ I S  +    LR+++SEGLRAA YE YK  C    
Sbjct: 410  VRMVDGSCAIVVFWQSGLSQTFLEAISSNWIS-GLLREMVSEGLRAAGYETYKNACRLGF 468

Query: 1267 LETNLTDSLDKPLAE 1311
             E +L DSLDK L E
Sbjct: 469  WEADLADSLDKALEE 483


>emb|CBI35579.3| unnamed protein product [Vitis vinifera]
          Length = 6458

 Score =  412 bits (1058), Expect = e-112
 Identities = 208/375 (55%), Positives = 273/375 (72%), Gaps = 1/375 (0%)
 Frame = +1

Query: 190  DALVRSIRKLILGGEVYGSRPCLTIDVCNERQVQLVLEMLNKCFDDLVPLVIPEKGGGSK 369
            +ALV+S+RKLILG E Y SRPC+ +DVC+E QVQLVLE+L + FDDLVPL+IP KGGG++
Sbjct: 6054 EALVKSLRKLILGSEEYRSRPCVNLDVCSEHQVQLVLEVLGEFFDDLVPLLIPAKGGGTQ 6113

Query: 370  GVRAVLTRSEEDKNLFKXXXXXXXXXQNKKVRGFREVIDVISASQKPIVAYNCLEEFSFI 549
             VR +LT SEEDK+L K         QNK+V GFREVID+ISASQKP+V++N L EF+FI
Sbjct: 6114 AVRVILTSSEEDKDLLKRELQDLEEEQNKRVCGFREVIDLISASQKPVVSHNSLNEFAFI 6173

Query: 550  HSKFIASLPPSMNEFMCSLRLVFPQILDITHLLKEIGPLKKASNIYAAISNLKRQFFVPL 729
            HSKF++ LPP+M+EFMCSLR+VFP +LD+ HL+KEIGPLKK +N+ AA S LKR+FFVP+
Sbjct: 6174 HSKFLSPLPPNMDEFMCSLRMVFPHVLDVNHLMKEIGPLKKVTNLSAAASCLKRRFFVPI 6233

Query: 730  DIEIPHQVQGHENKNYGHNVLFTAYLFAKLSSLLKITPDAQESSSDHQAISINRYANNFS 909
            D+EIPHQ   +E+K +GHNVL  ++L A L S+LKITP+  +S   H A ++  YAN F 
Sbjct: 6234 DMEIPHQA-SNEDKIHGHNVLKISHLLANLCSILKITPEMIQSDGGHLASALEGYANIFH 6292

Query: 910  PCSANLQEPTNED-DIWVNSTMKVSSRDLILLWGFSSGMPARELKSLLHGTHDVFLEDFE 1086
            P S N ++P +    +W + T KVSS  L+ +WGF   M A  LK LL G+H VF E+F+
Sbjct: 6293 PHSTNTEDPIDGGIKVWTDDTRKVSSEGLVFIWGFRGRMSAGGLKRLLQGSHSVFSEEFD 6352

Query: 1087 LRLLDKSCAVVVFKKPHAAEEFLKVIGSGGVGYDALRDLISEGLRAAEYEAYKRVCASAI 1266
            +R++D SCA+VVF +   ++ FL+ I S  +    LR+++SEGLRAA YE YK  C    
Sbjct: 6353 VRMVDGSCAIVVFWQSGLSQTFLEAISSNWIS-GLLREMVSEGLRAAGYETYKNACRLGF 6411

Query: 1267 LETNLTDSLDKPLAE 1311
             E +L DSLDK L E
Sbjct: 6412 WEADLADSLDKALEE 6426