BLASTX nr result
ID: Coptis25_contig00020873
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020873 (269 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays] 86 4e-15 ref|NP_178983.1| pentatricopeptide repeat-containing protein [Ar... 85 5e-15 ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containi... 84 9e-15 ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [S... 84 1e-14 ref|XP_002301797.1| predicted protein [Populus trichocarpa] gi|2... 84 1e-14 >gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays] Length = 853 Score = 85.5 bits (210), Expect = 4e-15 Identities = 40/89 (44%), Positives = 60/89 (67%) Frame = -3 Query: 267 QNGLVYEALEFFARMVREGIRPNGITLSSVLSACSKLMVVNLGKSVHGFSIRNDVFKDDV 88 QNG EAL+ F +M EGI+ N IT+S+ LSAC+ L + GK +HG +I+ + K D+ Sbjct: 522 QNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPI-KADI 580 Query: 87 VLKTAFVDMYAKCRNLDYGIRIFDGMKEK 1 ++A +DMYAKC NL+ +R+F+ M +K Sbjct: 581 FAESALIDMYAKCGNLELALRVFEFMPDK 609 Score = 70.9 bits (172), Expect = 1e-10 Identities = 33/88 (37%), Positives = 56/88 (63%) Frame = -3 Query: 264 NGLVYEALEFFARMVREGIRPNGITLSSVLSACSKLMVVNLGKSVHGFSIRNDVFKDDVV 85 NG+ EAL+ F ++ + I+PN +T++SVL C+ + + LG+ +HG+ +RN ++ Sbjct: 422 NGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRN-AYERKCY 480 Query: 84 LKTAFVDMYAKCRNLDYGIRIFDGMKEK 1 +++A +DMYAKC LD IF M +K Sbjct: 481 VESALMDMYAKCGRLDLSHYIFLKMSQK 508 Score = 67.4 bits (163), Expect = 1e-09 Identities = 38/87 (43%), Positives = 51/87 (58%) Frame = -3 Query: 267 QNGLVYEALEFFARMVREGIRPNGITLSSVLSACSKLMVVNLGKSVHGFSIRNDVFKDDV 88 QNGL EA F M R G RP+ ITL S+L A + L + GK VHG+ +RN V DV Sbjct: 320 QNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCV-NMDV 378 Query: 87 VLKTAFVDMYAKCRNLDYGIRIFDGMK 7 L +A VD+Y KCR++ ++D + Sbjct: 379 FLVSALVDIYFKCRDVRMAQNLYDAAR 405 >ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 697 Score = 85.1 bits (209), Expect = 5e-15 Identities = 38/86 (44%), Positives = 56/86 (65%) Frame = -3 Query: 267 QNGLVYEALEFFARMVREGIRPNGITLSSVLSACSKLMVVNLGKSVHGFSIRNDVFKDDV 88 QNG EAL+ F M+ + P+ +TL+SV+SAC+ L + +G+ VHG ++ND ++D+ Sbjct: 230 QNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI 289 Query: 87 VLKTAFVDMYAKCRNLDYGIRIFDGM 10 +L AFVDMYAKC + IFD M Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSM 315 Score = 64.3 bits (155), Expect = 1e-08 Identities = 37/83 (44%), Positives = 50/83 (60%) Frame = -3 Query: 249 EALEFFARMVREGIRPNGITLSSVLSACSKLMVVNLGKSVHGFSIRNDVFKDDVVLKTAF 70 EAL +FA M +EG N + +SVLSACS L +N G VH I F DV + +A Sbjct: 135 EALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSL-IAKSPFLSDVYIGSAL 193 Query: 69 VDMYAKCRNLDYGIRIFDGMKEK 1 VDMY+KC N++ R+FD M ++ Sbjct: 194 VDMYSKCGNVNDAQRVFDEMGDR 216 Score = 54.7 bits (130), Expect = 8e-06 Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 6/95 (6%) Frame = -3 Query: 267 QNGLVYEALEFFARMVREGIRPNGITLSSVLSACSKLMVVNLGKSV------HGFSIRND 106 QNG EAL F + RE + P + +++L AC+ L ++LG HGF ++ Sbjct: 363 QNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSG 422 Query: 105 VFKDDVVLKTAFVDMYAKCRNLDYGIRIFDGMKEK 1 +DD+ + + +DMY KC ++ G +F M E+ Sbjct: 423 E-EDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456 >ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like [Brachypodium distachyon] Length = 849 Score = 84.3 bits (207), Expect = 9e-15 Identities = 38/89 (42%), Positives = 60/89 (67%) Frame = -3 Query: 267 QNGLVYEALEFFARMVREGIRPNGITLSSVLSACSKLMVVNLGKSVHGFSIRNDVFKDDV 88 QNG EAL+ F +M+ EG++ N +T+SS+LSAC+ L + GK +HG I+ + + D+ Sbjct: 528 QNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPI-RADL 586 Query: 87 VLKTAFVDMYAKCRNLDYGIRIFDGMKEK 1 ++A +DMY KC NL+ +R+F+ M EK Sbjct: 587 FAESALIDMYGKCGNLELALRVFEHMPEK 615 Score = 70.5 bits (171), Expect = 1e-10 Identities = 36/87 (41%), Positives = 54/87 (62%) Frame = -3 Query: 267 QNGLVYEALEFFARMVREGIRPNGITLSSVLSACSKLMVVNLGKSVHGFSIRNDVFKDDV 88 QNGLV +AL F M + G++P+ +TL+S+L A ++L GK +HG+ +RN DV Sbjct: 326 QNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHV-DV 384 Query: 87 VLKTAFVDMYAKCRNLDYGIRIFDGMK 7 L +A VD+Y KCR++ +FD K Sbjct: 385 FLVSALVDIYFKCRDVRMAQNVFDATK 411 Score = 58.5 bits (140), Expect = 5e-07 Identities = 26/88 (29%), Positives = 52/88 (59%) Frame = -3 Query: 264 NGLVYEALEFFARMVREGIRPNGITLSSVLSACSKLMVVNLGKSVHGFSIRNDVFKDDVV 85 N + A++ F ++ GI+PN + ++S L AC+ + + +G+ +HG+ ++N ++ Sbjct: 428 NRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKN-AYEGRCY 486 Query: 84 LKTAFVDMYAKCRNLDYGIRIFDGMKEK 1 +++A +DMY+KC LD +F M K Sbjct: 487 VESALMDMYSKCGRLDLSHYMFSKMSAK 514 >ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor] gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor] Length = 862 Score = 84.0 bits (206), Expect = 1e-14 Identities = 39/89 (43%), Positives = 59/89 (66%) Frame = -3 Query: 267 QNGLVYEALEFFARMVREGIRPNGITLSSVLSACSKLMVVNLGKSVHGFSIRNDVFKDDV 88 QNG EAL+ F +M EGI+ N +T+SS LSAC+ L + GK +HG I+ + K D+ Sbjct: 522 QNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPI-KADI 580 Query: 87 VLKTAFVDMYAKCRNLDYGIRIFDGMKEK 1 ++A +DMYAKC N++ +R+F+ M +K Sbjct: 581 FAESALIDMYAKCGNMELALRVFEFMPDK 609 Score = 70.5 bits (171), Expect = 1e-10 Identities = 33/88 (37%), Positives = 56/88 (63%) Frame = -3 Query: 264 NGLVYEALEFFARMVREGIRPNGITLSSVLSACSKLMVVNLGKSVHGFSIRNDVFKDDVV 85 NG+ +AL+ F ++ + I+PN +T++SVL AC+ + + LG+ +HG+ +RN ++ Sbjct: 422 NGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRN-AYEGKCY 480 Query: 84 LKTAFVDMYAKCRNLDYGIRIFDGMKEK 1 +++A +DMYAKC LD IF M K Sbjct: 481 VESALMDMYAKCGRLDLSHYIFSKMSLK 508 Score = 69.3 bits (168), Expect = 3e-10 Identities = 38/87 (43%), Positives = 53/87 (60%) Frame = -3 Query: 267 QNGLVYEALEFFARMVREGIRPNGITLSSVLSACSKLMVVNLGKSVHGFSIRNDVFKDDV 88 QNGL+ EAL F M+R G RP+ +TL S+L A + L + GK VHG+ IRN V D Sbjct: 320 QNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHM-DA 378 Query: 87 VLKTAFVDMYAKCRNLDYGIRIFDGMK 7 L +A VD+Y KCR++ ++D + Sbjct: 379 FLVSALVDIYFKCRDVRTARNLYDAAR 405 >ref|XP_002301797.1| predicted protein [Populus trichocarpa] gi|222843523|gb|EEE81070.1| predicted protein [Populus trichocarpa] Length = 602 Score = 84.0 bits (206), Expect = 1e-14 Identities = 39/89 (43%), Positives = 60/89 (67%) Frame = -3 Query: 267 QNGLVYEALEFFARMVREGIRPNGITLSSVLSACSKLMVVNLGKSVHGFSIRNDVFKDDV 88 QNG V EA++ F RM +EGI +G+ + ++ AC+ L + LG SVHG ++R ++ DDV Sbjct: 184 QNGNVLEAVDMFRRMRKEGIEGDGVLMLGLVQACANLGELKLGLSVHGHAVRREMLMDDV 243 Query: 87 VLKTAFVDMYAKCRNLDYGIRIFDGMKEK 1 +L+T+ VDMYAK +L+ R+F+ M K Sbjct: 244 ILQTSLVDMYAKIGDLELASRVFEQMPRK 272 Score = 62.4 bits (150), Expect = 4e-08 Identities = 35/84 (41%), Positives = 48/84 (57%) Frame = -3 Query: 267 QNGLVYEALEFFARMVREGIRPNGITLSSVLSACSKLMVVNLGKSVHGFSIRNDVFKDDV 88 QNG AL+ M +P+ L S L ACS++ + LGKS+HG+ +R F ++ Sbjct: 286 QNGFAEYALDLLVEMQSLEFKPDTAVLVSALLACSQVGHLKLGKSIHGYIVRRLGF--EL 343 Query: 87 VLKTAFVDMYAKCRNLDYGIRIFD 16 VL TA +DMYAKC +L IFD Sbjct: 344 VLGTALIDMYAKCGSLSCAHAIFD 367