BLASTX nr result

ID: Coptis25_contig00020872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020872
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chlorop...   122   3e-26
ref|NP_001056543.1| Os06g0103600 [Oryza sativa Japonica Group] g...   117   9e-25
gb|EEC79823.1| hypothetical protein OsI_21278 [Oryza sativa Indi...   117   9e-25
ref|XP_003520424.1| PREDICTED: glycyl-tRNA synthetase 2, chlorop...   117   2e-24
ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitoch...   117   2e-24

>ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2,
           chloroplastic/mitochondrial-like [Vitis vinifera]
           gi|297734621|emb|CBI16672.3| unnamed protein product
           [Vitis vinifera]
          Length = 1071

 Score =  122 bits (307), Expect = 3e-26
 Identities = 54/60 (90%), Positives = 58/60 (96%)
 Frame = +1

Query: 367 GINVNVHDV*FVEDNWESPVLGAWGLGWEIWMDGMEVTQFTFFQQAGSLQLLPISVEITY 546
           GIN+N HD+ FVEDNWESPVLGAWGLGWEIWMDGME+TQFT+FQQAGSLQLLPISVEITY
Sbjct: 174 GININEHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLQLLPISVEITY 233


>ref|NP_001056543.1| Os06g0103600 [Oryza sativa Japonica Group]
           gi|55296761|dbj|BAD67953.1| putative aminoacyl-t-RNA
           synthetase [Oryza sativa Japonica Group]
           gi|113594583|dbj|BAF18457.1| Os06g0103600 [Oryza sativa
           Japonica Group] gi|222634809|gb|EEE64941.1| hypothetical
           protein OsJ_19814 [Oryza sativa Japonica Group]
          Length = 1068

 Score =  117 bits (294), Expect = 9e-25
 Identities = 51/66 (77%), Positives = 57/66 (86%)
 Frame = +1

Query: 349 HPEKVTGINVNVHDV*FVEDNWESPVLGAWGLGWEIWMDGMEVTQFTFFQQAGSLQLLPI 528
           H     GINV  HD+ FVEDNWESPVLGAWGLGWE+WMDGME+TQFT+FQQ+GSL LLP+
Sbjct: 165 HSLSALGINVREHDIRFVEDNWESPVLGAWGLGWEVWMDGMEITQFTYFQQSGSLPLLPV 224

Query: 529 SVEITY 546
           SVEITY
Sbjct: 225 SVEITY 230


>gb|EEC79823.1| hypothetical protein OsI_21278 [Oryza sativa Indica Group]
          Length = 1068

 Score =  117 bits (294), Expect = 9e-25
 Identities = 51/66 (77%), Positives = 57/66 (86%)
 Frame = +1

Query: 349 HPEKVTGINVNVHDV*FVEDNWESPVLGAWGLGWEIWMDGMEVTQFTFFQQAGSLQLLPI 528
           H     GINV  HD+ FVEDNWESPVLGAWGLGWE+WMDGME+TQFT+FQQ+GSL LLP+
Sbjct: 165 HSLSALGINVREHDIRFVEDNWESPVLGAWGLGWEVWMDGMEITQFTYFQQSGSLPLLPV 224

Query: 529 SVEITY 546
           SVEITY
Sbjct: 225 SVEITY 230


>ref|XP_003520424.1| PREDICTED: glycyl-tRNA synthetase 2,
           chloroplastic/mitochondrial-like [Glycine max]
          Length = 1074

 Score =  117 bits (292), Expect = 2e-24
 Identities = 51/60 (85%), Positives = 56/60 (93%)
 Frame = +1

Query: 367 GINVNVHDV*FVEDNWESPVLGAWGLGWEIWMDGMEVTQFTFFQQAGSLQLLPISVEITY 546
           GI+V  HD+ FVEDNWESPVLGAWGLGWEIWMDGME+TQFT+FQQAGSLQL P+SVEITY
Sbjct: 177 GIDVTAHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLQLSPVSVEITY 236


>ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor,
           putative [Ricinus communis] gi|223548759|gb|EEF50248.1|
           Glycyl-tRNA synthetase 2, chloroplast/mitochondrial
           precursor, putative [Ricinus communis]
          Length = 1069

 Score =  117 bits (292), Expect = 2e-24
 Identities = 52/60 (86%), Positives = 57/60 (95%)
 Frame = +1

Query: 367 GINVNVHDV*FVEDNWESPVLGAWGLGWEIWMDGMEVTQFTFFQQAGSLQLLPISVEITY 546
           GI+V+ HD+ FVEDNWESPVLGAWGLGWEIWMDGME+TQFT+FQQAGSLQL PISVEITY
Sbjct: 172 GIDVSEHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLQLSPISVEITY 231


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