BLASTX nr result

ID: Coptis25_contig00020869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020869
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278340.1| PREDICTED: uncharacterized protein LOC100257...   127   5e-27
emb|CAN82077.1| hypothetical protein VITISV_016663 [Vitis vinifera]   127   5e-27
ref|XP_002518498.1| hypothetical protein RCOM_0905070 [Ricinus c...   119   1e-24
ref|XP_002319845.1| predicted protein [Populus trichocarpa] gi|2...   114   3e-23
gb|ABR16442.1| unknown [Picea sitchensis]                             111   2e-22

>ref|XP_002278340.1| PREDICTED: uncharacterized protein LOC100257339 [Vitis vinifera]
           gi|297737428|emb|CBI26629.3| unnamed protein product
           [Vitis vinifera]
          Length = 414

 Score =  127 bits (318), Expect = 5e-27
 Identities = 69/145 (47%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
 Frame = +1

Query: 247 MSEENPVTDPALVQNLPVKRKRGRPRKDENLRRVEKSPVVTPKPDTAKKNPPKNISSTSN 426
           M+E N  ++P    N PVKRKRGRPRKD++ +R E + +  P  + A  N P  +   + 
Sbjct: 1   MNEANQGSNPDFPGNFPVKRKRGRPRKDQSKKRGENAHI-PPGFEGADANLPLQVEPINV 59

Query: 427 GDYAMVGQAVSGVLDGSFEAGYLITVKVGDTNTFLRGVVFEPGFVVPISEANDVASNVKM 606
            + AMVGQ VSGV+D SF+AGYL+TV+VG+++T L+GVVF+PG  VPIS  NDVA +V+M
Sbjct: 60  VNDAMVGQVVSGVVDASFDAGYLLTVRVGNSDTILKGVVFKPGRYVPISSENDVAPHVQM 119

Query: 607 IKRNEIPVDLSGHLHQQ-YNQKTEQ 678
           I+RNEI +       +Q YN +  +
Sbjct: 120 IRRNEIHLPAGNQSQEQGYNPQARE 144


>emb|CAN82077.1| hypothetical protein VITISV_016663 [Vitis vinifera]
          Length = 479

 Score =  127 bits (318), Expect = 5e-27
 Identities = 69/145 (47%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
 Frame = +1

Query: 247 MSEENPVTDPALVQNLPVKRKRGRPRKDENLRRVEKSPVVTPKPDTAKKNPPKNISSTSN 426
           M+E N  ++P    N PVKRKRGRPRKD++ +R E + +  P  + A  N P  +   + 
Sbjct: 1   MNEANQGSNPDFPGNFPVKRKRGRPRKDQSKKRGENAHI-PPGFEGADANLPLQVEPINV 59

Query: 427 GDYAMVGQAVSGVLDGSFEAGYLITVKVGDTNTFLRGVVFEPGFVVPISEANDVASNVKM 606
            + AMVGQ VSGV+D SF+AGYL+TV+VG+++T L+GVVF+PG  VPIS  NDVA +V+M
Sbjct: 60  VNDAMVGQVVSGVVDASFDAGYLLTVRVGNSDTILKGVVFKPGRYVPISSENDVAPHVQM 119

Query: 607 IKRNEIPVDLSGHLHQQ-YNQKTEQ 678
           I+RNEI +       +Q YN +  +
Sbjct: 120 IRRNEIHLPAGNQSQEQGYNPQARE 144


>ref|XP_002518498.1| hypothetical protein RCOM_0905070 [Ricinus communis]
           gi|223542343|gb|EEF43885.1| hypothetical protein
           RCOM_0905070 [Ricinus communis]
          Length = 491

 Score =  119 bits (297), Expect = 1e-24
 Identities = 68/155 (43%), Positives = 94/155 (60%), Gaps = 1/155 (0%)
 Frame = +1

Query: 247 MSEENPVTDPALVQNLPVKRKRGRPRKDENLRRVEKSP-VVTPKPDTAKKNPPKNISSTS 423
           M+ ++  T  +   + P+KRKRGRPRKDE++ + E  P   TP  D+ KKN  +++ +  
Sbjct: 1   MNPQSQGTSSSSPADPPLKRKRGRPRKDESMVQGENMPATATPSADSLKKN-KQSVGTAG 59

Query: 424 NGDYAMVGQAVSGVLDGSFEAGYLITVKVGDTNTFLRGVVFEPGFVVPISEANDVASNVK 603
                MVG+ VSGV++GSF+AGYL+ VKVGDT T LRGVVF PG   PI+ +NDVA   K
Sbjct: 60  AVSDEMVGKVVSGVIEGSFDAGYLLKVKVGDTETHLRGVVFLPGRFTPITASNDVAPEAK 119

Query: 604 MIKRNEIPVDLSGHLHQQYNQKTEQTVKVPEPLPS 708
           M +R E+P+ +     Q           VP P+PS
Sbjct: 120 MYRRTEMPIPVPTRPSQ-----------VPGPVPS 143


>ref|XP_002319845.1| predicted protein [Populus trichocarpa] gi|222858221|gb|EEE95768.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score =  114 bits (285), Expect = 3e-23
 Identities = 57/128 (44%), Positives = 82/128 (64%)
 Frame = +1

Query: 247 MSEENPVTDPALVQNLPVKRKRGRPRKDENLRRVEKSPVVTPKPDTAKKNPPKNISSTSN 426
           MSE N   +P     +P+KR+RGRPRK   +  V+ +    P       N P  +   +N
Sbjct: 1   MSEANQGNNPDASAIVPLKRRRGRPRKYPKME-VDHNAHAPPGFGVVNSNQPHQVGPVNN 59

Query: 427 GDYAMVGQAVSGVLDGSFEAGYLITVKVGDTNTFLRGVVFEPGFVVPISEANDVASNVKM 606
              AM+GQ+V GV++ +F+AGYL+ V+VGDT T LRGVVF+PG  +P++  ND+A +V M
Sbjct: 60  AIDAMIGQSVYGVIEATFDAGYLLNVRVGDTETTLRGVVFKPGHYIPVNPENDIAPDVPM 119

Query: 607 IKRNEIPV 630
           I+RNEIP+
Sbjct: 120 IRRNEIPL 127


>gb|ABR16442.1| unknown [Picea sitchensis]
          Length = 305

 Score =  111 bits (278), Expect = 2e-22
 Identities = 63/113 (55%), Positives = 79/113 (69%), Gaps = 2/113 (1%)
 Frame = +1

Query: 289 NLPVKRKRGRPRKDENLRRVEKSPVVTPKPDTAKKNPPKNISST--SNGDYAMVGQAVSG 462
           ++P KRKRGRPRK   L   EK+ V   + D  KK   K I S+  S  D   VGQ+V G
Sbjct: 14  DIPPKRKRGRPRKQHLLYPGEKAHV-PQRLDGKKKPRRKKIDSSMPSFPDNTFVGQSVHG 72

Query: 463 VLDGSFEAGYLITVKVGDTNTFLRGVVFEPGFVVPISEANDVASNVKMIKRNE 621
           VLDGSF+AGYL+ V+VGDT+T LRGVVF+PG  VPIS+AND+A NV + +R+E
Sbjct: 73  VLDGSFDAGYLLMVRVGDTDTVLRGVVFDPGMSVPISKANDIAPNVNLTRRDE 125


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