BLASTX nr result

ID: Coptis25_contig00020863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020863
         (1020 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524431.1| conserved hypothetical protein [Ricinus comm...   261   1e-67
ref|XP_003634156.1| PREDICTED: uncharacterized protein LOC100854...   256   8e-66
ref|XP_002321946.1| predicted protein [Populus trichocarpa] gi|2...   250   4e-64
ref|XP_002872115.1| hypothetical protein ARALYDRAFT_489310 [Arab...   239   8e-61
ref|NP_197834.1| uncharacterized protein [Arabidopsis thaliana] ...   238   1e-60

>ref|XP_002524431.1| conserved hypothetical protein [Ricinus communis]
           gi|223536315|gb|EEF37966.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 278

 Score =  261 bits (668), Expect = 1e-67
 Identities = 134/230 (58%), Positives = 171/230 (74%), Gaps = 2/230 (0%)
 Frame = +3

Query: 162 FLKIPNNFPRCCCRPFLKIPNMPPTKSRFP--TPQSLTNWLKPRLPQDSFSSWGNKPGTK 335
           F+ +P+N  R     FLK+P M  +K+  P  TPQSL++WLKPRLP DSF+SWG KPGTK
Sbjct: 53  FICLPSNRRR-----FLKVPAMSISKNNHPFATPQSLSDWLKPRLPSDSFASWGVKPGTK 107

Query: 336 NIHNLFLEISEGESILTDTTPPIRNLHVITVXXXXXXXXNCVLIEAFQELSDGTRRERFR 515
           N+ NL+LE+SEGE+ L D+TPPIR + V+TV        N VL+E+ QELSDG+ R R R
Sbjct: 108 NVQNLWLELSEGETSLADSTPPIRTVSVVTVRVIGEK--NTVLVESHQELSDGSVRNRCR 165

Query: 516 PLSEKMKPNESVENAVLRAVKEELGSVITSEDDGNVKIVEGSYVEKVEERGSVSYPGLPA 695
           PLSEKMKPNE+ E AV RA+KEELGS++   DD NV+IV+GSY EK+EER S+SYPGLPA
Sbjct: 166 PLSEKMKPNETPEAAVFRAIKEELGSILN--DDANVRIVDGSYKEKIEERNSLSYPGLPA 223

Query: 696 CYVLHCVEACVDGLPSEDFWTEEGNEYGECSEGDIVEKAVFVKKHFWKWV 845
            YVL+ ++  VDGLP+++F TEE  EY +  +    +KAV V+KHFWKWV
Sbjct: 224 RYVLYSMDVIVDGLPNDEFSTEEVEEYSDSEDKRTADKAVSVRKHFWKWV 273


>ref|XP_003634156.1| PREDICTED: uncharacterized protein LOC100854009 [Vitis vinifera]
          Length = 292

 Score =  256 bits (653), Expect = 8e-66
 Identities = 150/268 (55%), Positives = 181/268 (67%), Gaps = 6/268 (2%)
 Frame = +3

Query: 60  HPFNPTSLCLPDXXXXXXXXXXXXXXXXKPHKNLFLKIPN-NFPRCCCRPFLKIPNM--- 227
           H   PTSL  PD                KP + LF KI + +FP+   R FLK P M   
Sbjct: 29  HLPKPTSL--PDLFFTALSLLFLFPSSPKP-QTLFSKISSLSFPQNP-RRFLKTPTMISP 84

Query: 228 --PPTKSRFPTPQSLTNWLKPRLPQDSFSSWGNKPGTKNIHNLFLEISEGESILTDTTPP 401
             P   ++F +PQSLT+WLK RLP DSF+SWG KPGTKN+HNL+LE+SEGE+ L D+ PP
Sbjct: 85  SNPKPITQFSSPQSLTDWLKHRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSIPP 144

Query: 402 IRNLHVITVXXXXXXXXNCVLIEAFQELSDGTRRERFRPLSEKMKPNESVENAVLRAVKE 581
           IR + V+TV        N +L+E+ QELSDGT RER RPLSEKMKP E++E AV RAVKE
Sbjct: 145 IRTVRVVTV--RIISEDNRILLESHQELSDGTIRERCRPLSEKMKPGETLECAVHRAVKE 202

Query: 582 ELGSVITSEDDGNVKIVEGSYVEKVEERGSVSYPGLPACYVLHCVEACVDGLPSEDFWTE 761
           ELGS+I  + +GNV+IV GSY +KVEER S SYPGLPACYVLH V A VDGLP  +F TE
Sbjct: 203 ELGSII--QGNGNVRIVPGSYEQKVEERVSASYPGLPACYVLHSVNAWVDGLPDGEFCTE 260

Query: 762 EGNEYGECSEGDIVEKAVFVKKHFWKWV 845
           E  EY + +   I E AV VK+H+WKWV
Sbjct: 261 E-EEYRDWNGMGIAEMAVSVKRHYWKWV 287


>ref|XP_002321946.1| predicted protein [Populus trichocarpa]
           gi|224134957|ref|XP_002321947.1| predicted protein
           [Populus trichocarpa] gi|222868942|gb|EEF06073.1|
           predicted protein [Populus trichocarpa]
           gi|222868943|gb|EEF06074.1| predicted protein [Populus
           trichocarpa]
          Length = 216

 Score =  250 bits (638), Expect = 4e-64
 Identities = 123/200 (61%), Positives = 152/200 (76%)
 Frame = +3

Query: 246 FPTPQSLTNWLKPRLPQDSFSSWGNKPGTKNIHNLFLEISEGESILTDTTPPIRNLHVIT 425
           F TPQSL++WLKPRLP DSF+SWG KPGTKNIHNL+LEIS+GE+ L D+TPPIR ++V+T
Sbjct: 13  FSTPQSLSDWLKPRLPSDSFASWGIKPGTKNIHNLWLEISQGETFLADSTPPIRTVNVVT 72

Query: 426 VXXXXXXXXNCVLIEAFQELSDGTRRERFRPLSEKMKPNESVENAVLRAVKEELGSVITS 605
           V        N  LIE+ QELSDG+ R R RPLSEKMKPNES ++A+ RA+ EELGS++  
Sbjct: 73  VKIINK---NQTLIESHQELSDGSVRNRCRPLSEKMKPNESFKDAIFRAINEELGSILKD 129

Query: 606 EDDGNVKIVEGSYVEKVEERGSVSYPGLPACYVLHCVEACVDGLPSEDFWTEEGNEYGEC 785
            ++ ++ IV GSY EKVEER S+SYPGLPA YVL+  +  V+GLP  +F TEE  EY + 
Sbjct: 130 GNEVSINIVNGSYKEKVEERNSMSYPGLPARYVLYSADVEVNGLPDGEFCTEEAEEYPDS 189

Query: 786 SEGDIVEKAVFVKKHFWKWV 845
            E  + EKAV VKKHFWKWV
Sbjct: 190 EEKRVAEKAVSVKKHFWKWV 209


>ref|XP_002872115.1| hypothetical protein ARALYDRAFT_489310 [Arabidopsis lyrata subsp.
           lyrata] gi|297317952|gb|EFH48374.1| hypothetical protein
           ARALYDRAFT_489310 [Arabidopsis lyrata subsp. lyrata]
          Length = 295

 Score =  239 bits (610), Expect = 8e-61
 Identities = 121/214 (56%), Positives = 157/214 (73%), Gaps = 8/214 (3%)
 Frame = +3

Query: 228 PPTKSRFPTPQSLTNWLKPRLPQDSFSSWGNKPGTKNIHNLFLEISEGESILTDTTPPIR 407
           PP   RF  PQSL++WL+ RLP DSF++WG KPGTKN+HNL+LE+S+GE+ L D+TPP+R
Sbjct: 78  PPPSQRFANPQSLSDWLESRLPSDSFAAWGVKPGTKNVHNLWLELSDGETSLADSTPPVR 137

Query: 408 NLHVITVXXXXXXXXNCVLIEAFQELSDGTRRERFRPLSEKMKPNESVENAVLRAVKEEL 587
            ++V+TV          +L+EA QELSDG+ R+RFRPLSEKMKP ES + AV RA+KEEL
Sbjct: 138 TVNVVTVRVIGKNGR--ILVEAHQELSDGSIRDRFRPLSEKMKPEESPDEAVFRAIKEEL 195

Query: 588 GSVITSEDDG-NVKIVEGSYVEKVEERGSVSYPGLPACYVLHCVEACVDGLPSEDFWTEE 764
           GS+   +D G  ++I+ G+Y  +VEER S+SYPGLPA Y LH V+A V+GLP EDF T+E
Sbjct: 196 GSIFNGDDVGQRIRILPGTYSRRVEERNSLSYPGLPARYALHSVDATVEGLPEEDFCTDE 255

Query: 765 GNEY--GECSEGDIVE-----KAVFVKKHFWKWV 845
             EY  G+ +  D VE     KAV VK+H+WKWV
Sbjct: 256 -KEYDGGDSTTEDSVETRAAGKAVTVKRHYWKWV 288


>ref|NP_197834.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758534|dbj|BAB08929.1| unnamed protein product
           [Arabidopsis thaliana] gi|17065180|gb|AAL32744.1|
           Unknown protein [Arabidopsis thaliana]
           gi|20259932|gb|AAM13313.1| unknown protein [Arabidopsis
           thaliana] gi|332005930|gb|AED93313.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 300

 Score =  238 bits (608), Expect = 1e-60
 Identities = 121/217 (55%), Positives = 152/217 (70%), Gaps = 8/217 (3%)
 Frame = +3

Query: 219 PNMPPTKSRFPTPQSLTNWLKPRLPQDSFSSWGNKPGTKNIHNLFLEISEGESILTDTTP 398
           P  PP   RF  PQSL++WL+ RLP DSF++WG KPGTKN+HNL+LE+S+GE+ L D+TP
Sbjct: 79  PPPPPPTQRFANPQSLSDWLESRLPSDSFAAWGVKPGTKNVHNLWLELSDGETSLADSTP 138

Query: 399 PIRNLHVITVXXXXXXXXNCVLIEAFQELSDGTRRERFRPLSEKMKPNESVENAVLRAVK 578
           P+R ++V+TV          +L+EA QELSDG+ RERFRPLSEKMKP ES + AV RA+K
Sbjct: 139 PVRTVNVVTVRVIGKNGR--ILVEAHQELSDGSIRERFRPLSEKMKPEESPDEAVFRAIK 196

Query: 579 EELGSVITSEDDG---NVKIVEGSYVEKVEERGSVSYPGLPACYVLHCVEACVDGLPSED 749
           EELGS+   + D     +KI+ G+Y  +VEER S+SYPGLPA Y LH V A V+GLP +D
Sbjct: 197 EELGSIFNGDGDNIGQRIKILPGTYNRRVEERNSLSYPGLPARYALHSVNATVEGLPEQD 256

Query: 750 FWTEEGNEYGECSEGDIVE-----KAVFVKKHFWKWV 845
           F TEE    G  S  D VE      AV VK+H+WKWV
Sbjct: 257 FCTEEKEYEGGDSTKDSVETLAAGNAVTVKRHYWKWV 293


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