BLASTX nr result

ID: Coptis25_contig00020860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020860
         (1869 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326690.1| predicted protein [Populus trichocarpa] gi|2...   856   0.0  
ref|XP_002282871.1| PREDICTED: beta-amylase 3, chloroplastic-lik...   840   0.0  
ref|XP_002329547.1| predicted protein [Populus trichocarpa] gi|1...   837   0.0  
emb|CAN62440.1| hypothetical protein VITISV_032500 [Vitis vinifera]   837   0.0  
ref|XP_002517513.1| Beta-amylase, putative [Ricinus communis] gi...   830   0.0  

>ref|XP_002326690.1| predicted protein [Populus trichocarpa] gi|222834012|gb|EEE72489.1|
            predicted protein [Populus trichocarpa]
          Length = 547

 Score =  856 bits (2212), Expect = 0.0
 Identities = 402/544 (73%), Positives = 468/544 (86%), Gaps = 1/544 (0%)
 Frame = +2

Query: 56   MALTLRYSSSFINPIDTKNPKTTDEFVGSVSFPKTKHSYYCLRVKNSSINEAQTSHEKTL 235
            M   L+ S+SFI+  DT++PKT D+F G++ F   K S  C     +S+ EAQ SH++ L
Sbjct: 1    MTSALQSSTSFISLKDTRSPKTPDDFSGTICFAHIKPS--CRLQAKNSMQEAQLSHDEIL 58

Query: 236  YFNGRGEERAEMQHVLSSQKK-NGPKVPVYVMLPLDTVSIGGNLNRPKSLNASLMALKSA 412
               GR  ++    H +S  +  N  KVPV+VMLPLDT++IGGNLN+P+++NASLMAL+SA
Sbjct: 59   MTEGRKSKKGGELHAISGPRSSNDSKVPVFVMLPLDTITIGGNLNKPRAMNASLMALRSA 118

Query: 413  GVEGVMVDAWWGLVEKNGPMNYNWKGYFDLVQMVEKHGLKIQVVMSFHQCGGNVGDSCSI 592
            GVEGVMVDAWWGLVEK+GP+ YNW+GY +LVQMV+KHGLK+QVVMSFHQCGGNVGDSCSI
Sbjct: 119  GVEGVMVDAWWGLVEKDGPLKYNWEGYAELVQMVQKHGLKLQVVMSFHQCGGNVGDSCSI 178

Query: 593  PLPPWVLEEISNNPDLVYTDRSGRRNLEYISLGCDSLPVLRGRTPIQVYSDYMRSFRDHF 772
            PLPPWVLEE+S NPDLVYTDRSGRRN EYISLGCDSLP+LRGRTPIQVYSDYMRSFR+ F
Sbjct: 179  PLPPWVLEEMSKNPDLVYTDRSGRRNPEYISLGCDSLPILRGRTPIQVYSDYMRSFRERF 238

Query: 773  KDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMKASLKATADAIG 952
            KDYLG VI+EIQVGMGPCGELRYP+YPE+NGTWRFPGIGEFQCYDKYM+ASL+A+A+A+G
Sbjct: 239  KDYLGDVIMEIQVGMGPCGELRYPAYPETNGTWRFPGIGEFQCYDKYMRASLEASAEALG 298

Query: 953  KESWGTNGPHDSGQYNQFPEDTGFFRRDGTWNTDYGQFFLQWYSHKLIEHGDQILAAAQG 1132
            K+ WG  GPHDSGQYN FPE+TGFFRRDGTWNT+YGQFFL+WYS KL+EHG++ILAAA+G
Sbjct: 299  KKDWGRGGPHDSGQYNHFPEETGFFRRDGTWNTEYGQFFLEWYSGKLLEHGEKILAAAEG 358

Query: 1133 IYRGTGAKLSGKVAGIHWHYNTRSHAAELTAGYYNTRHHDGYLPIAQMLGKRNAVLNFTC 1312
            I++GTGA+LSGKVAGIHWHY TRSHAAELTAGYYNTRHHDGYLPIA+M  K   V NFTC
Sbjct: 359  IFQGTGAQLSGKVAGIHWHYRTRSHAAELTAGYYNTRHHDGYLPIARMFSKHGVVFNFTC 418

Query: 1313 MEMRDGEQPASANCSPQGLVKQVKMATKLTGTELAGENALERYDEGAYAQVLETSRSDSG 1492
            MEMRDGEQP  ANCSPQGLV+QVKMAT+  GTELAGENALERYD GAY QVL TSRS+SG
Sbjct: 419  MEMRDGEQPEHANCSPQGLVRQVKMATRTAGTELAGENALERYDAGAYTQVLATSRSESG 478

Query: 1493 NGLTAFTYLRLNKRMFEGDNWRNLVVFVNNMSEGGRMIRLSEYDSTGSDLYVGFIHDRKM 1672
            NGLTAFTYLR+NK++FEGDNWR LV FV +MSEGGR  +LSE DS G++LY+GFI D+ +
Sbjct: 479  NGLTAFTYLRMNKKLFEGDNWRQLVEFVKSMSEGGRNEKLSECDSHGTNLYIGFIKDKSV 538

Query: 1673 DIKK 1684
               K
Sbjct: 539  QKTK 542


>ref|XP_002282871.1| PREDICTED: beta-amylase 3, chloroplastic-like isoform 1 [Vitis
            vinifera]
          Length = 543

 Score =  840 bits (2170), Expect = 0.0
 Identities = 410/546 (75%), Positives = 463/546 (84%), Gaps = 1/546 (0%)
 Frame = +2

Query: 56   MALTLRYSSSFINPIDTKNPKTTDEFVGSVSFPKTKHSYYCLRVKNSSINEAQTSHEKTL 235
            MALTLR S+SFINP DTK  KT D    S+ F  +K    C      S  EA   HE  +
Sbjct: 1    MALTLRSSTSFINPKDTKGLKTPD-ISSSIFFTPSKPP--CSIRAKISTQEAHLCHENAM 57

Query: 236  YFNGRGEERAEMQHVLSS-QKKNGPKVPVYVMLPLDTVSIGGNLNRPKSLNASLMALKSA 412
               GR   + ++ H L +   KNG +VPV+VMLPLDTVS GGNLN+P+++NASLMALKS+
Sbjct: 58   VSEGR---KNQVLHGLPTPHNKNGSRVPVFVMLPLDTVSFGGNLNKPRAMNASLMALKSS 114

Query: 413  GVEGVMVDAWWGLVEKNGPMNYNWKGYFDLVQMVEKHGLKIQVVMSFHQCGGNVGDSCSI 592
            GVEGVMVDAWWGLVEK+GPM YNW+GY +LVQMV++HGLK+QVVMSFHQCGGNVGDSCSI
Sbjct: 115  GVEGVMVDAWWGLVEKDGPMKYNWEGYAELVQMVQRHGLKLQVVMSFHQCGGNVGDSCSI 174

Query: 593  PLPPWVLEEISNNPDLVYTDRSGRRNLEYISLGCDSLPVLRGRTPIQVYSDYMRSFRDHF 772
            PLPPWVLEEIS N DLVYTDRSGRRN EYISLGCDS+PVLRGRTPIQVYSDYMRSF + F
Sbjct: 175  PLPPWVLEEISKNTDLVYTDRSGRRNPEYISLGCDSIPVLRGRTPIQVYSDYMRSFHNRF 234

Query: 773  KDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMKASLKATADAIG 952
            KDYLG VI EIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYM+ASL+A+ADA+G
Sbjct: 235  KDYLGGVIAEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMRASLEASADAVG 294

Query: 953  KESWGTNGPHDSGQYNQFPEDTGFFRRDGTWNTDYGQFFLQWYSHKLIEHGDQILAAAQG 1132
            K+ WG +GP D+G YNQFPEDTGFFRRDGTW T+YGQFFL+WYS KL+EHGD+ILAAA+G
Sbjct: 295  KKDWGRSGPQDAGHYNQFPEDTGFFRRDGTWTTEYGQFFLKWYSGKLLEHGDRILAAAEG 354

Query: 1133 IYRGTGAKLSGKVAGIHWHYNTRSHAAELTAGYYNTRHHDGYLPIAQMLGKRNAVLNFTC 1312
            I++GTGAKLSGKVAGIHWHY TRSHAAELTAGYYNTR+HDGYLPIA+M+GK   VLNFTC
Sbjct: 355  IFQGTGAKLSGKVAGIHWHYKTRSHAAELTAGYYNTRNHDGYLPIARMMGKYGVVLNFTC 414

Query: 1313 MEMRDGEQPASANCSPQGLVKQVKMATKLTGTELAGENALERYDEGAYAQVLETSRSDSG 1492
            MEM+D EQ   ANCSP+GLV+QVKMATK  GTELAGENALERYD  AYAQVL TSRSDSG
Sbjct: 415  MEMKDREQQEHANCSPEGLVRQVKMATKTAGTELAGENALERYDSSAYAQVLATSRSDSG 474

Query: 1493 NGLTAFTYLRLNKRMFEGDNWRNLVVFVNNMSEGGRMIRLSEYDSTGSDLYVGFIHDRKM 1672
            NGL+AFTYLR+NKR+FEGDNWR+LV FV NMSEGGR  RL E DS+G+DLY+GFI  +K 
Sbjct: 475  NGLSAFTYLRMNKRLFEGDNWRSLVEFVRNMSEGGRN-RLPECDSSGTDLYIGFI-KKKK 532

Query: 1673 DIKKAV 1690
            D+ K +
Sbjct: 533  DVAKTM 538


>ref|XP_002329547.1| predicted protein [Populus trichocarpa] gi|118487474|gb|ABK95564.1|
            unknown [Populus trichocarpa] gi|222870256|gb|EEF07387.1|
            predicted protein [Populus trichocarpa]
          Length = 548

 Score =  837 bits (2163), Expect = 0.0
 Identities = 400/541 (73%), Positives = 463/541 (85%), Gaps = 2/541 (0%)
 Frame = +2

Query: 56   MALTLRYSSSFINPIDTKNPKTTDEFVGSVSFPKTKHSYYCLRVKNSSINEAQTSHEKTL 235
            M +TLR S+SFI+   T++ KT D F G+V F + K S   L+ KNS   EAQ S +  L
Sbjct: 1    MTITLRSSTSFISLRHTRSLKTPDGFSGTVCFAQIKPSCR-LQAKNSK-QEAQLSQDDIL 58

Query: 236  YFNGRGEERAEMQHVLSS--QKKNGPKVPVYVMLPLDTVSIGGNLNRPKSLNASLMALKS 409
               GR  +  E  H +S      +  +VPV+VMLPLDTV+IGGNLN+P+++NASLMAL+S
Sbjct: 59   VTEGRKSKNWEKLHAISGPDHSSSNSRVPVFVMLPLDTVTIGGNLNKPRAMNASLMALRS 118

Query: 410  AGVEGVMVDAWWGLVEKNGPMNYNWKGYFDLVQMVEKHGLKIQVVMSFHQCGGNVGDSCS 589
            AGVEGVMVDAWWGLVEK+GP+ YNW+GY +LVQMV+KHGLK+QVVMSFHQCGGNVGDSCS
Sbjct: 119  AGVEGVMVDAWWGLVEKDGPLKYNWEGYAELVQMVQKHGLKLQVVMSFHQCGGNVGDSCS 178

Query: 590  IPLPPWVLEEISNNPDLVYTDRSGRRNLEYISLGCDSLPVLRGRTPIQVYSDYMRSFRDH 769
            IPLPPWVLEE+S N DLVYTD+SGRRN EYISLGCDSLP+LRGRTPIQVYSDYMRSFR+ 
Sbjct: 179  IPLPPWVLEEMSKNLDLVYTDKSGRRNPEYISLGCDSLPLLRGRTPIQVYSDYMRSFRNR 238

Query: 770  FKDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMKASLKATADAI 949
            FKDYLG+VI EIQVGMGPCGELRYP+YPES GTW FPGIGEFQCYDKYM+ASL+A+A+A+
Sbjct: 239  FKDYLGQVITEIQVGMGPCGELRYPAYPESKGTWNFPGIGEFQCYDKYMRASLEASAEAV 298

Query: 950  GKESWGTNGPHDSGQYNQFPEDTGFFRRDGTWNTDYGQFFLQWYSHKLIEHGDQILAAAQ 1129
            GK  WG  GPHDSGQYNQFPE+TGFFRRDGTWNT+YGQFFL+WYS KL+EHGD+ILAAA+
Sbjct: 299  GKTGWGQRGPHDSGQYNQFPEETGFFRRDGTWNTEYGQFFLEWYSGKLLEHGDKILAAAE 358

Query: 1130 GIYRGTGAKLSGKVAGIHWHYNTRSHAAELTAGYYNTRHHDGYLPIAQMLGKRNAVLNFT 1309
            GI+RGTGAKLSGKVAGIHWHY TRSHAAELTAGYYNTRHHDGYLP+A+M  K   V NFT
Sbjct: 359  GIFRGTGAKLSGKVAGIHWHYGTRSHAAELTAGYYNTRHHDGYLPMARMFSKHGVVFNFT 418

Query: 1310 CMEMRDGEQPASANCSPQGLVKQVKMATKLTGTELAGENALERYDEGAYAQVLETSRSDS 1489
            CMEMRDGEQP  ANCSP+GLV+QVKMAT+   TELAGENALERYD GA++QV+ TSRS+S
Sbjct: 419  CMEMRDGEQPQHANCSPEGLVRQVKMATRTARTELAGENALERYDAGAFSQVMATSRSES 478

Query: 1490 GNGLTAFTYLRLNKRMFEGDNWRNLVVFVNNMSEGGRMIRLSEYDSTGSDLYVGFIHDRK 1669
            GNGLTAFTYLR+NKR+FEGDNW +LV FV +MSEGGR  +LSE DS+G++LYVGFI D+ 
Sbjct: 479  GNGLTAFTYLRMNKRLFEGDNWLHLVQFVESMSEGGRHGKLSECDSSGTNLYVGFIKDKS 538

Query: 1670 M 1672
            +
Sbjct: 539  V 539


>emb|CAN62440.1| hypothetical protein VITISV_032500 [Vitis vinifera]
          Length = 543

 Score =  837 bits (2161), Expect = 0.0
 Identities = 409/546 (74%), Positives = 461/546 (84%), Gaps = 1/546 (0%)
 Frame = +2

Query: 56   MALTLRYSSSFINPIDTKNPKTTDEFVGSVSFPKTKHSYYCLRVKNSSINEAQTSHEKTL 235
            MALTLR S+SFINP DTK  KT D    S+ F  +K    C      S  EA   HE  +
Sbjct: 1    MALTLRSSTSFINPKDTKGLKTPD-ISSSIFFTPSKPP--CSIRAKISTQEAHLCHENAM 57

Query: 236  YFNGRGEERAEMQHVLSS-QKKNGPKVPVYVMLPLDTVSIGGNLNRPKSLNASLMALKSA 412
               GR   + ++ H L +   KNG +VPV+VMLPLDTVS GGNLN+P+++NASLMALKSA
Sbjct: 58   VSEGR---KNQVLHGLPTPHNKNGSRVPVFVMLPLDTVSFGGNLNKPRAMNASLMALKSA 114

Query: 413  GVEGVMVDAWWGLVEKNGPMNYNWKGYFDLVQMVEKHGLKIQVVMSFHQCGGNVGDSCSI 592
            GVEGVMVDAWWGLVEK+GPM YNW+GY +LVQMV++HGLK+QVVMSFHQCGGNVGDSCSI
Sbjct: 115  GVEGVMVDAWWGLVEKDGPMKYNWEGYAELVQMVQRHGLKLQVVMSFHQCGGNVGDSCSI 174

Query: 593  PLPPWVLEEISNNPDLVYTDRSGRRNLEYISLGCDSLPVLRGRTPIQVYSDYMRSFRDHF 772
            PLPPWVLEEIS N DLVYTDRSGRRN EYISLGCDS+PVLRGRTPIQVYSDYMRSF + F
Sbjct: 175  PLPPWVLEEISKNTDLVYTDRSGRRNPEYISLGCDSIPVLRGRTPIQVYSDYMRSFHNRF 234

Query: 773  KDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMKASLKATADAIG 952
            KDYLG VI EIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYM+ASL+A+ADA+G
Sbjct: 235  KDYLGGVIAEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMRASLEASADAVG 294

Query: 953  KESWGTNGPHDSGQYNQFPEDTGFFRRDGTWNTDYGQFFLQWYSHKLIEHGDQILAAAQG 1132
            K+ WG +GP D+G YNQFPEDTGFFRRDGTW T+YGQFFL+WYS KL+EHGD+ILAAA+G
Sbjct: 295  KKDWGRSGPQDAGHYNQFPEDTGFFRRDGTWTTEYGQFFLKWYSGKLLEHGDRILAAAEG 354

Query: 1133 IYRGTGAKLSGKVAGIHWHYNTRSHAAELTAGYYNTRHHDGYLPIAQMLGKRNAVLNFTC 1312
            I++GTGAKLSGKVAGIHWHY TRSHAAELTAGYYNTR+HDGYLPIA+M+GK   VLNFTC
Sbjct: 355  IFQGTGAKLSGKVAGIHWHYKTRSHAAELTAGYYNTRNHDGYLPIARMMGKYGVVLNFTC 414

Query: 1313 MEMRDGEQPASANCSPQGLVKQVKMATKLTGTELAGENALERYDEGAYAQVLETSRSDSG 1492
            MEM+D EQ   ANCSP+GLV+QVKMATK   TELAGENALERYD  AYAQVL TSRSDSG
Sbjct: 415  MEMKDREQQEHANCSPEGLVRQVKMATKTAXTELAGENALERYDSSAYAQVLATSRSDSG 474

Query: 1493 NGLTAFTYLRLNKRMFEGDNWRNLVVFVNNMSEGGRMIRLSEYDSTGSDLYVGFIHDRKM 1672
            NGL+AFTYLR+NKR+FEGDNWR+LV FV NMSEGGR  RL E DS+G+D Y+GFI  +K 
Sbjct: 475  NGLSAFTYLRMNKRLFEGDNWRSLVEFVRNMSEGGRN-RLPECDSSGTDXYIGFI-KKKK 532

Query: 1673 DIKKAV 1690
            D+ K +
Sbjct: 533  DVAKTM 538


>ref|XP_002517513.1| Beta-amylase, putative [Ricinus communis] gi|223543524|gb|EEF45055.1|
            Beta-amylase, putative [Ricinus communis]
          Length = 547

 Score =  830 bits (2143), Expect = 0.0
 Identities = 393/538 (73%), Positives = 453/538 (84%), Gaps = 1/538 (0%)
 Frame = +2

Query: 56   MALTLRYSSSFINPIDTKNPKTTDEFVGSVSFPKTKHSYYCLRVKNSSINEAQTSHEKTL 235
            M+LTL  S+SFIN  DTK+ KT D+F G++ F + K S  C     +S+ EAQ S +   
Sbjct: 1    MSLTLHSSTSFINIKDTKSVKTPDDFSGTICFAQIKPS--CRLGAKNSMQEAQLSQDNIF 58

Query: 236  YFNGRGEERAEMQHVLS-SQKKNGPKVPVYVMLPLDTVSIGGNLNRPKSLNASLMALKSA 412
               GR  +  E  H +S SQ  N  KVPV+VMLPLDTV++GGNLN+P+++NASLMALKSA
Sbjct: 59   TMEGRRSDNREKLHAMSNSQSSNDSKVPVFVMLPLDTVTLGGNLNKPRAMNASLMALKSA 118

Query: 413  GVEGVMVDAWWGLVEKNGPMNYNWKGYFDLVQMVEKHGLKIQVVMSFHQCGGNVGDSCSI 592
            GVEGVMVDAWWGLVEK+GP  YNW+GY DLV MV+KHGLK+QVVMSFHQCGGNVGDSCSI
Sbjct: 119  GVEGVMVDAWWGLVEKDGPRKYNWEGYADLVHMVQKHGLKLQVVMSFHQCGGNVGDSCSI 178

Query: 593  PLPPWVLEEISNNPDLVYTDRSGRRNLEYISLGCDSLPVLRGRTPIQVYSDYMRSFRDHF 772
            PLPPWVLEEIS NPDLVYTDRSGRRN EYISLGCDSLPVLRGRTPIQVY+DYMRSF + F
Sbjct: 179  PLPPWVLEEISKNPDLVYTDRSGRRNPEYISLGCDSLPVLRGRTPIQVYTDYMRSFCNRF 238

Query: 773  KDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMKASLKATADAIG 952
            +DYLG V+VEIQVGMGPCGELRYP+YPESNGTW+FPGIGEFQCYDKYMKASL+A+A+AIG
Sbjct: 239  RDYLGEVVVEIQVGMGPCGELRYPAYPESNGTWKFPGIGEFQCYDKYMKASLEASAEAIG 298

Query: 953  KESWGTNGPHDSGQYNQFPEDTGFFRRDGTWNTDYGQFFLQWYSHKLIEHGDQILAAAQG 1132
             + WG  GPHD+G Y QFPE+TGFFRRDGTW T+YGQFFL+WYS KL++HGD+ILAAA+G
Sbjct: 299  NKDWGRGGPHDAGHYKQFPEETGFFRRDGTWKTEYGQFFLEWYSGKLLDHGDRILAAAKG 358

Query: 1133 IYRGTGAKLSGKVAGIHWHYNTRSHAAELTAGYYNTRHHDGYLPIAQMLGKRNAVLNFTC 1312
            I++GTGAKLSGKVAGIHWHY TRSHA ELTAGYYNTRHHDGYL +A M  K   V NFTC
Sbjct: 359  IFQGTGAKLSGKVAGIHWHYRTRSHAPELTAGYYNTRHHDGYLTVAHMFSKHGVVFNFTC 418

Query: 1313 MEMRDGEQPASANCSPQGLVKQVKMATKLTGTELAGENALERYDEGAYAQVLETSRSDSG 1492
            MEMRDGEQP  AN SP+GLV+QVKMAT+  G ELAGENALERYD   YAQVL TSRS+SG
Sbjct: 419  MEMRDGEQPGHANSSPEGLVRQVKMATRSAGVELAGENALERYDAAGYAQVLATSRSESG 478

Query: 1493 NGLTAFTYLRLNKRMFEGDNWRNLVVFVNNMSEGGRMIRLSEYDSTGSDLYVGFIHDR 1666
            NGLTAFTYLR+NK++FEGD+W++LV FV +MSE G+  RL E DS G++LY+GFI D+
Sbjct: 479  NGLTAFTYLRMNKKLFEGDHWQHLVEFVKSMSEHGQNKRLPECDSEGTNLYIGFIKDK 536


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