BLASTX nr result

ID: Coptis25_contig00020836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020836
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524522.1| protein with unknown function [Ricinus commu...    98   1e-18
ref|XP_002283379.1| PREDICTED: uncharacterized protein LOC100267...    97   3e-18
emb|CAN60929.1| hypothetical protein VITISV_008358 [Vitis vinifera]    97   3e-18
gb|ABR17433.1| unknown [Picea sitchensis]                              96   4e-18
ref|NP_564632.1| uncharacterized protein [Arabidopsis thaliana] ...    92   6e-17

>ref|XP_002524522.1| protein with unknown function [Ricinus communis]
           gi|223536196|gb|EEF37849.1| protein with unknown
           function [Ricinus communis]
          Length = 299

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 51/107 (47%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
 Frame = +2

Query: 5   LSEEDVKRLLLFGCPSVTKKSAFAAKRLRSYFNIRETMVCRPCKLNNVCEFANHIV-GKK 181
           LS  D+K++ LFGCPS+ KK+ F+AKRLR Y  I+E +VC  C L + C+F N  V    
Sbjct: 190 LSGSDLKKVALFGCPSLAKKNVFSAKRLRKYLEIQEDIVCNKCVLRHSCKFVNQSVWNSD 249

Query: 182 ADEMNVGDLMRSLTSYGFGLTHSNLIVPDEIKDSVSNLLKQVVTHSQ 322
              +N+  LMR +T Y   L H +L VPDEIK SV  LLK+++  SQ
Sbjct: 250 YKTLNLVVLMRVITLYALELAHPDLPVPDEIKGSVRRLLKEILKLSQ 296


>ref|XP_002283379.1| PREDICTED: uncharacterized protein LOC100267416 [Vitis vinifera]
           gi|302142872|emb|CBI20167.3| unnamed protein product
           [Vitis vinifera]
          Length = 330

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 49/107 (45%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
 Frame = +2

Query: 5   LSEEDVKRLLLFGCPSVTKKSAFAAKRLRSYFNIRETMVCRPCKLNNVCEFANHIVGK-K 181
           LS  D+K++ LFGCPS+++KS FAAKRLR++F I+E +VC  C L   C+F N  V K  
Sbjct: 221 LSGSDLKKVALFGCPSLSRKSVFAAKRLRTFFRIQEELVCSKCVLKQSCKFVNQSVWKGD 280

Query: 182 ADEMNVGDLMRSLTSYGFGLTHSNLIVPDEIKDSVSNLLKQVVTHSQ 322
              +N+  +MR LT Y        L++PDE+K SV  LLK+V+  S+
Sbjct: 281 TKSLNLSVVMRLLTLYAMESMPPQLVLPDEVKASVGRLLKEVLRLSE 327


>emb|CAN60929.1| hypothetical protein VITISV_008358 [Vitis vinifera]
          Length = 330

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 49/107 (45%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
 Frame = +2

Query: 5   LSEEDVKRLLLFGCPSVTKKSAFAAKRLRSYFNIRETMVCRPCKLNNVCEFANHIVGK-K 181
           LS  D+K++ LFGCPS+++KS FAAKRLR++F I+E +VC  C L   C+F N  V K  
Sbjct: 221 LSGSDLKKVALFGCPSLSRKSVFAAKRLRTFFRIQEELVCSKCVLKQSCKFVNQSVWKGD 280

Query: 182 ADEMNVGDLMRSLTSYGFGLTHSNLIVPDEIKDSVSNLLKQVVTHSQ 322
              +N+  +MR LT Y        L++PDE+K SV  LLK+V+  S+
Sbjct: 281 TKSLNLSVVMRLLTLYAMESMPPQLVLPDEVKASVGRLLKEVLRLSE 327


>gb|ABR17433.1| unknown [Picea sitchensis]
          Length = 514

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 47/106 (44%), Positives = 66/106 (62%)
 Frame = +2

Query: 2   LLSEEDVKRLLLFGCPSVTKKSAFAAKRLRSYFNIRETMVCRPCKLNNVCEFANHIVGKK 181
           LLS  D++++ LFGCPS+ KK  FAAKRLRS+FNI +   CRPC L + C  A      K
Sbjct: 396 LLSGSDMRKIALFGCPSLEKKDVFAAKRLRSFFNIEQGTACRPCNLKDTCS-APFAKVSK 454

Query: 182 ADEMNVGDLMRSLTSYGFGLTHSNLIVPDEIKDSVSNLLKQVVTHS 319
              +   D++R L ++G     + L +PD++K SV NLLK++V  S
Sbjct: 455 VKSLTAEDVVRLLCTFGLNAEKNELSIPDDVKQSVVNLLKELVDFS 500


>ref|NP_564632.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8671880|gb|AAF78443.1|AC018748_22 Contains similarity
           to H+-ATPase FO-part b-subunit from Lactococcus lactis
           subsp. cremoris gb|AF059739 [Arabidopsis thaliana]
           gi|17386132|gb|AAL38612.1|AF446879_1 At1g53460/T3F20_21
           [Arabidopsis thaliana] gi|15450677|gb|AAK96610.1|
           At1g53460/T3F20_21 [Arabidopsis thaliana]
           gi|332194823|gb|AEE32944.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 314

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 45/102 (44%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
 Frame = +2

Query: 5   LSEEDVKRLLLFGCPSVTKKSAFAAKRLRSYFNIRETMVCRPCKLNNVCEFANHIV-GKK 181
           LS  D+K+++LFGCPS+ K++ FAAK LR++F+I E  VC  C L   C+F N  V   K
Sbjct: 201 LSGSDLKKIVLFGCPSLEKRAVFAAKTLRNFFDIHENNVCEKCVLKEKCKFPNQSVWDGK 260

Query: 182 ADEMNVGDLMRSLTSYGFGLTHSNLIVPDEIKDSVSNLLKQV 307
              +++  +M+ +T Y   LTH  L VP E++DSVS LL ++
Sbjct: 261 TKHLHLSVVMKVITLYPLDLTHPKLQVPQEVQDSVSRLLTEI 302


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