BLASTX nr result

ID: Coptis25_contig00020834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020834
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301538.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36
gb|ABK92443.1| unknown [Populus trichocarpa]                          156   1e-36
ref|XP_003536856.1| PREDICTED: uncharacterized protein LOC100775...   147   7e-34
ref|XP_003553677.1| PREDICTED: uncharacterized protein LOC100779...   125   5e-27
ref|XP_002279985.1| PREDICTED: uncharacterized protein LOC100253...   123   1e-26

>ref|XP_002301538.1| predicted protein [Populus trichocarpa] gi|222843264|gb|EEE80811.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  157 bits (396), Expect = 1e-36
 Identities = 74/152 (48%), Positives = 100/152 (65%), Gaps = 1/152 (0%)
 Frame = +3

Query: 3   FVIFKVKKPHLNSTDLWIPCWRGLHPIYLLIYRALVFSFMSWLLYRVAVSDRVFAFFFYT 182
           ++I K K   L   DLW P WR L+P++LL YR   F  +S +LYR+   D  FAF+FYT
Sbjct: 32  YIIKKAKTQPLYIHDLWKPRWRCLNPLWLLCYRFFAFLCLSPMLYRIVYLDGAFAFYFYT 91

Query: 183 QWTFTLVIVYFALGTIISAHGCWEYLKTPVVGNQ-ERDEFLKKHSEDSQPRTTVTSKTNE 359
           QWTF L+++YFALGT+ISA+GCW  LK P V    E   FLK+  E+    T++T K  +
Sbjct: 92  QWTFMLIMIYFALGTVISAYGCWVSLKQPAVSEHGENSVFLKRDVEEDATATSITYKEKK 151

Query: 360 VGNTVTLQRHHEEEEVKQQAGFWGYLMLILYQ 455
            G T+ L+ H  EE ++++AGFWGYLM I+YQ
Sbjct: 152 SGGTIKLRSHCAEEAIRERAGFWGYLMQIIYQ 183


>gb|ABK92443.1| unknown [Populus trichocarpa]
          Length = 320

 Score =  156 bits (395), Expect = 1e-36
 Identities = 74/152 (48%), Positives = 100/152 (65%), Gaps = 1/152 (0%)
 Frame = +3

Query: 3   FVIFKVKKPHLNSTDLWIPCWRGLHPIYLLIYRALVFSFMSWLLYRVAVSDRVFAFFFYT 182
           ++I K K   L   DLW P WR L+P++LL YR   F  +S +LYR+   D  FAF+FYT
Sbjct: 32  YIIKKAKTQPLYIHDLWKPRWRCLNPLWLLCYRFFAFLCLSPMLYRIVYLDGAFAFYFYT 91

Query: 183 QWTFTLVIVYFALGTIISAHGCWEYLKTPVVGNQ-ERDEFLKKHSEDSQPRTTVTSKTNE 359
           QWTF L+++YFALGT+ISA+GCW  LK P V    E   FLK+  E+    T++T K  +
Sbjct: 92  QWTFMLIMIYFALGTVISAYGCWVSLKQPAVSEHGENSVFLKRDVEEDGTATSITYKEKK 151

Query: 360 VGNTVTLQRHHEEEEVKQQAGFWGYLMLILYQ 455
            G T+ L+ H  EE ++++AGFWGYLM I+YQ
Sbjct: 152 SGGTIKLRSHCAEEAIRERAGFWGYLMQIIYQ 183


>ref|XP_003536856.1| PREDICTED: uncharacterized protein LOC100775788 [Glycine max]
          Length = 407

 Score =  147 bits (372), Expect = 7e-34
 Identities = 68/149 (45%), Positives = 94/149 (63%)
 Frame = +3

Query: 9   IFKVKKPHLNSTDLWIPCWRGLHPIYLLIYRALVFSFMSWLLYRVAVSDRVFAFFFYTQW 188
           I K K        LW+PCWR L P++L   RA  F  ++ L + +   D  F+F+FYTQW
Sbjct: 124 IVKAKAQPFYHNHLWLPCWRKLSPVWLFFSRAFAFLCLAHLHFDIIALDGAFSFYFYTQW 183

Query: 189 TFTLVIVYFALGTIISAHGCWEYLKTPVVGNQERDEFLKKHSEDSQPRTTVTSKTNEVGN 368
           TFTLV++YFALGTIISAHGCW+Y+  P + N E  EFL++  E+S    ++  +  E  +
Sbjct: 184 TFTLVMIYFALGTIISAHGCWQYINKPPLQNGEMAEFLRRDLEES--TNSIAYREKETKS 241

Query: 369 TVTLQRHHEEEEVKQQAGFWGYLMLILYQ 455
           ++ LQ  + +EE  Q+ GFWGYLM I YQ
Sbjct: 242 SIRLQSQYIQEEFNQRVGFWGYLMQITYQ 270


>ref|XP_003553677.1| PREDICTED: uncharacterized protein LOC100779894 [Glycine max]
          Length = 333

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/150 (38%), Positives = 87/150 (58%)
 Frame = +3

Query: 6   VIFKVKKPHLNSTDLWIPCWRGLHPIYLLIYRALVFSFMSWLLYRVAVSDRVFAFFFYTQ 185
           V+  + + H+++  LW  CWRGLHP  LL+ R L F  M   L    ++     FF+YT+
Sbjct: 55  VVSVLHRGHVSTPQLWTSCWRGLHPFCLLVTRFLSFVIMLLFLLWDVLAYDASIFFYYTE 114

Query: 186 WTFTLVIVYFALGTIISAHGCWEYLKTPVVGNQERDEFLKKHSEDSQPRTTVTSKTNEVG 365
           WT  LV +YFALGTI+SAHGCW     P++ N  + EFL++  E++     + S      
Sbjct: 115 WTIILVTIYFALGTIVSAHGCWRCFNKPLIHNGAKAEFLRRDVEETMSTNLIASN----- 169

Query: 366 NTVTLQRHHEEEEVKQQAGFWGYLMLILYQ 455
               L+  + EE+ +Q+AGFWG++M  +YQ
Sbjct: 170 ---KLESQYVEEDFQQRAGFWGFIMQTIYQ 196


>ref|XP_002279985.1| PREDICTED: uncharacterized protein LOC100253796 [Vitis vinifera]
           gi|297744042|emb|CBI37012.3| unnamed protein product
           [Vitis vinifera]
          Length = 336

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/142 (40%), Positives = 88/142 (61%)
 Frame = +3

Query: 30  HLNSTDLWIPCWRGLHPIYLLIYRALVFSFMSWLLYRVAVSDRVFAFFFYTQWTFTLVIV 209
           H++S+ LW  CWRG+HP++LL+ R + F  M+  L    +      F +YT+WTF+LVIV
Sbjct: 63  HVSSSQLWSSCWRGVHPVWLLLLRVVSFFVMAGFLAWDVLKWDATIFVYYTEWTFSLVIV 122

Query: 210 YFALGTIISAHGCWEYLKTPVVGNQERDEFLKKHSEDSQPRTTVTSKTNEVGNTVTLQRH 389
           YFALG+ +SA+GCW Y   P   N   ++      E+S+  T V  +  E+  T+ LQ H
Sbjct: 123 YFALGSCMSAYGCWVYSMKPPSENGVTEDL-----EESRSSTAVIFRAKEIRGTIKLQSH 177

Query: 390 HEEEEVKQQAGFWGYLMLILYQ 455
           +++E ++++AG  GYLM I YQ
Sbjct: 178 YDQEAIQRRAGLLGYLMQIAYQ 199


Top