BLASTX nr result

ID: Coptis25_contig00020832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020832
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307453.1| nramp transporter [Populus trichocarpa] gi|2...   136   1e-33
ref|XP_002520334.1| metal transporter, putative [Ricinus communi...   134   2e-33
ref|XP_002307454.1| nramp transporter [Populus trichocarpa] gi|2...   134   4e-33
dbj|BAM34953.1| metal transporter Nramp1 [Solanum melongena]          132   4e-33
gb|AAU00158.1| root-specific metal transporter [Malus baccata]        132   6e-33

>ref|XP_002307453.1| nramp transporter [Populus trichocarpa] gi|222856902|gb|EEE94449.1|
           nramp transporter [Populus trichocarpa]
          Length = 518

 Score =  136 bits (342), Expect(2) = 1e-33
 Identities = 78/135 (57%), Positives = 83/135 (61%)
 Frame = +2

Query: 2   GMFIPKLNGDGATGDAIALFGALIMPYDSIYILTFKDLLRYKQISRWLSAVPPLLLVLQA 181
           GMFIPKL+G GATGDAIAL GALIMP                                  
Sbjct: 189 GMFIPKLSGQGATGDAIALLGALIMP---------------------------------- 214

Query: 182 H*QCFFIRHNLFLHSALVLSRKIPKSVNGINSACRYFLIESGFALLIAFFINVAVISVSG 361
                   HNLFLHSALVLSRK+P SV GIN ACRYFLIESGFAL IAF IN+AVISVSG
Sbjct: 215 --------HNLFLHSALVLSRKMPNSVRGINDACRYFLIESGFALFIAFLINLAVISVSG 266

Query: 362 TVCSEKNLSHDNKDR 406
           TVCS +NLS +N DR
Sbjct: 267 TVCSAQNLSSENADR 281



 Score = 32.0 bits (71), Expect(2) = 1e-33
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +1

Query: 406 CKDITLNSASFLLQNV 453
           C D+TLNSASFLLQNV
Sbjct: 282 CGDLTLNSASFLLQNV 297


>ref|XP_002520334.1| metal transporter, putative [Ricinus communis]
           gi|223540553|gb|EEF42120.1| metal transporter, putative
           [Ricinus communis]
          Length = 528

 Score =  134 bits (336), Expect(2) = 2e-33
 Identities = 72/137 (52%), Positives = 83/137 (60%)
 Frame = +2

Query: 2   GMFIPKLNGDGATGDAIALFGALIMPYDSIYILTFKDLLRYKQISRWLSAVPPLLLVLQA 181
           GMF+PKL+G GATGDAIAL GAL+MP                                  
Sbjct: 208 GMFVPKLSGQGATGDAIALLGALVMP---------------------------------- 233

Query: 182 H*QCFFIRHNLFLHSALVLSRKIPKSVNGINSACRYFLIESGFALLIAFFINVAVISVSG 361
                   HNLFLHSALVLSRK+P S++G N ACRYFL+ESGFAL IAF INVAV+SVSG
Sbjct: 234 --------HNLFLHSALVLSRKVPNSIHGANDACRYFLVESGFALFIAFLINVAVVSVSG 285

Query: 362 TVCSEKNLSHDNKDRAK 412
           TVCS   LSH N+D+ +
Sbjct: 286 TVCSAHTLSHKNEDQCR 302



 Score = 33.5 bits (75), Expect(2) = 2e-33
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = +1

Query: 406 CKDITLNSASFLLQNV 453
           C+D+TLNSASFLLQNV
Sbjct: 301 CRDLTLNSASFLLQNV 316


>ref|XP_002307454.1| nramp transporter [Populus trichocarpa] gi|222856903|gb|EEE94450.1|
           nramp transporter [Populus trichocarpa]
          Length = 585

 Score =  134 bits (337), Expect(2) = 4e-33
 Identities = 77/135 (57%), Positives = 82/135 (60%)
 Frame = +2

Query: 2   GMFIPKLNGDGATGDAIALFGALIMPYDSIYILTFKDLLRYKQISRWLSAVPPLLLVLQA 181
           GMFIPKL+G GATGDAIAL GALIMP                                  
Sbjct: 253 GMFIPKLSGQGATGDAIALLGALIMP---------------------------------- 278

Query: 182 H*QCFFIRHNLFLHSALVLSRKIPKSVNGINSACRYFLIESGFALLIAFFINVAVISVSG 361
                   HNLFLHSALVLSRK+P SV GIN AC YFLIESGFAL IAF IN+AVISVSG
Sbjct: 279 --------HNLFLHSALVLSRKMPNSVRGINDACHYFLIESGFALFIAFLINLAVISVSG 330

Query: 362 TVCSEKNLSHDNKDR 406
           TVCS +NLS +N DR
Sbjct: 331 TVCSAQNLSSENADR 345



 Score = 32.0 bits (71), Expect(2) = 4e-33
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +1

Query: 406 CKDITLNSASFLLQNV 453
           C D+TLNSASFLLQNV
Sbjct: 346 CGDLTLNSASFLLQNV 361


>dbj|BAM34953.1| metal transporter Nramp1 [Solanum melongena]
          Length = 531

 Score =  132 bits (333), Expect(2) = 4e-33
 Identities = 74/134 (55%), Positives = 80/134 (59%)
 Frame = +2

Query: 2   GMFIPKLNGDGATGDAIALFGALIMPYDSIYILTFKDLLRYKQISRWLSAVPPLLLVLQA 181
           GMFIPKL GDGATGDAIAL GAL+MP                                  
Sbjct: 210 GMFIPKLKGDGATGDAIALLGALVMP---------------------------------- 235

Query: 182 H*QCFFIRHNLFLHSALVLSRKIPKSVNGINSACRYFLIESGFALLIAFFINVAVISVSG 361
                   HNLFLHSALVLSRKIP S+ GIN ACR+FLIESGFAL I+F INVAV+SVSG
Sbjct: 236 --------HNLFLHSALVLSRKIPNSIRGINDACRFFLIESGFALFISFLINVAVVSVSG 287

Query: 362 TVCSEKNLSHDNKD 403
           TVC   NLS  NK+
Sbjct: 288 TVCGAHNLSQQNKE 301



 Score = 33.5 bits (75), Expect(2) = 4e-33
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +1

Query: 403 SCKDITLNSASFLLQNV 453
           SC DITLNSASFLL+NV
Sbjct: 302 SCSDITLNSASFLLKNV 318


>gb|AAU00158.1| root-specific metal transporter [Malus baccata]
          Length = 551

 Score =  132 bits (333), Expect(2) = 6e-33
 Identities = 75/134 (55%), Positives = 80/134 (59%)
 Frame = +2

Query: 2   GMFIPKLNGDGATGDAIALFGALIMPYDSIYILTFKDLLRYKQISRWLSAVPPLLLVLQA 181
           GMFIPKL+G GATGDAIAL GALIMP                                  
Sbjct: 226 GMFIPKLSGQGATGDAIALLGALIMP---------------------------------- 251

Query: 182 H*QCFFIRHNLFLHSALVLSRKIPKSVNGINSACRYFLIESGFALLIAFFINVAVISVSG 361
                   HNLFLHSALVLSRKIP SV G+N ACRYFLIESGFAL +AF INVA+ISVSG
Sbjct: 252 --------HNLFLHSALVLSRKIPNSVRGMNDACRYFLIESGFALFVAFLINVAIISVSG 303

Query: 362 TVCSEKNLSHDNKD 403
           TVC + NLS  N D
Sbjct: 304 TVCHQSNLSDKNND 317



 Score = 33.1 bits (74), Expect(2) = 6e-33
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +1

Query: 403 SCKDITLNSASFLLQNV 453
           +C D+TLNSASFLLQNV
Sbjct: 318 TCSDLTLNSASFLLQNV 334


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