BLASTX nr result
ID: Coptis25_contig00020832
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020832 (454 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002307453.1| nramp transporter [Populus trichocarpa] gi|2... 136 1e-33 ref|XP_002520334.1| metal transporter, putative [Ricinus communi... 134 2e-33 ref|XP_002307454.1| nramp transporter [Populus trichocarpa] gi|2... 134 4e-33 dbj|BAM34953.1| metal transporter Nramp1 [Solanum melongena] 132 4e-33 gb|AAU00158.1| root-specific metal transporter [Malus baccata] 132 6e-33 >ref|XP_002307453.1| nramp transporter [Populus trichocarpa] gi|222856902|gb|EEE94449.1| nramp transporter [Populus trichocarpa] Length = 518 Score = 136 bits (342), Expect(2) = 1e-33 Identities = 78/135 (57%), Positives = 83/135 (61%) Frame = +2 Query: 2 GMFIPKLNGDGATGDAIALFGALIMPYDSIYILTFKDLLRYKQISRWLSAVPPLLLVLQA 181 GMFIPKL+G GATGDAIAL GALIMP Sbjct: 189 GMFIPKLSGQGATGDAIALLGALIMP---------------------------------- 214 Query: 182 H*QCFFIRHNLFLHSALVLSRKIPKSVNGINSACRYFLIESGFALLIAFFINVAVISVSG 361 HNLFLHSALVLSRK+P SV GIN ACRYFLIESGFAL IAF IN+AVISVSG Sbjct: 215 --------HNLFLHSALVLSRKMPNSVRGINDACRYFLIESGFALFIAFLINLAVISVSG 266 Query: 362 TVCSEKNLSHDNKDR 406 TVCS +NLS +N DR Sbjct: 267 TVCSAQNLSSENADR 281 Score = 32.0 bits (71), Expect(2) = 1e-33 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = +1 Query: 406 CKDITLNSASFLLQNV 453 C D+TLNSASFLLQNV Sbjct: 282 CGDLTLNSASFLLQNV 297 >ref|XP_002520334.1| metal transporter, putative [Ricinus communis] gi|223540553|gb|EEF42120.1| metal transporter, putative [Ricinus communis] Length = 528 Score = 134 bits (336), Expect(2) = 2e-33 Identities = 72/137 (52%), Positives = 83/137 (60%) Frame = +2 Query: 2 GMFIPKLNGDGATGDAIALFGALIMPYDSIYILTFKDLLRYKQISRWLSAVPPLLLVLQA 181 GMF+PKL+G GATGDAIAL GAL+MP Sbjct: 208 GMFVPKLSGQGATGDAIALLGALVMP---------------------------------- 233 Query: 182 H*QCFFIRHNLFLHSALVLSRKIPKSVNGINSACRYFLIESGFALLIAFFINVAVISVSG 361 HNLFLHSALVLSRK+P S++G N ACRYFL+ESGFAL IAF INVAV+SVSG Sbjct: 234 --------HNLFLHSALVLSRKVPNSIHGANDACRYFLVESGFALFIAFLINVAVVSVSG 285 Query: 362 TVCSEKNLSHDNKDRAK 412 TVCS LSH N+D+ + Sbjct: 286 TVCSAHTLSHKNEDQCR 302 Score = 33.5 bits (75), Expect(2) = 2e-33 Identities = 14/16 (87%), Positives = 16/16 (100%) Frame = +1 Query: 406 CKDITLNSASFLLQNV 453 C+D+TLNSASFLLQNV Sbjct: 301 CRDLTLNSASFLLQNV 316 >ref|XP_002307454.1| nramp transporter [Populus trichocarpa] gi|222856903|gb|EEE94450.1| nramp transporter [Populus trichocarpa] Length = 585 Score = 134 bits (337), Expect(2) = 4e-33 Identities = 77/135 (57%), Positives = 82/135 (60%) Frame = +2 Query: 2 GMFIPKLNGDGATGDAIALFGALIMPYDSIYILTFKDLLRYKQISRWLSAVPPLLLVLQA 181 GMFIPKL+G GATGDAIAL GALIMP Sbjct: 253 GMFIPKLSGQGATGDAIALLGALIMP---------------------------------- 278 Query: 182 H*QCFFIRHNLFLHSALVLSRKIPKSVNGINSACRYFLIESGFALLIAFFINVAVISVSG 361 HNLFLHSALVLSRK+P SV GIN AC YFLIESGFAL IAF IN+AVISVSG Sbjct: 279 --------HNLFLHSALVLSRKMPNSVRGINDACHYFLIESGFALFIAFLINLAVISVSG 330 Query: 362 TVCSEKNLSHDNKDR 406 TVCS +NLS +N DR Sbjct: 331 TVCSAQNLSSENADR 345 Score = 32.0 bits (71), Expect(2) = 4e-33 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = +1 Query: 406 CKDITLNSASFLLQNV 453 C D+TLNSASFLLQNV Sbjct: 346 CGDLTLNSASFLLQNV 361 >dbj|BAM34953.1| metal transporter Nramp1 [Solanum melongena] Length = 531 Score = 132 bits (333), Expect(2) = 4e-33 Identities = 74/134 (55%), Positives = 80/134 (59%) Frame = +2 Query: 2 GMFIPKLNGDGATGDAIALFGALIMPYDSIYILTFKDLLRYKQISRWLSAVPPLLLVLQA 181 GMFIPKL GDGATGDAIAL GAL+MP Sbjct: 210 GMFIPKLKGDGATGDAIALLGALVMP---------------------------------- 235 Query: 182 H*QCFFIRHNLFLHSALVLSRKIPKSVNGINSACRYFLIESGFALLIAFFINVAVISVSG 361 HNLFLHSALVLSRKIP S+ GIN ACR+FLIESGFAL I+F INVAV+SVSG Sbjct: 236 --------HNLFLHSALVLSRKIPNSIRGINDACRFFLIESGFALFISFLINVAVVSVSG 287 Query: 362 TVCSEKNLSHDNKD 403 TVC NLS NK+ Sbjct: 288 TVCGAHNLSQQNKE 301 Score = 33.5 bits (75), Expect(2) = 4e-33 Identities = 15/17 (88%), Positives = 16/17 (94%) Frame = +1 Query: 403 SCKDITLNSASFLLQNV 453 SC DITLNSASFLL+NV Sbjct: 302 SCSDITLNSASFLLKNV 318 >gb|AAU00158.1| root-specific metal transporter [Malus baccata] Length = 551 Score = 132 bits (333), Expect(2) = 6e-33 Identities = 75/134 (55%), Positives = 80/134 (59%) Frame = +2 Query: 2 GMFIPKLNGDGATGDAIALFGALIMPYDSIYILTFKDLLRYKQISRWLSAVPPLLLVLQA 181 GMFIPKL+G GATGDAIAL GALIMP Sbjct: 226 GMFIPKLSGQGATGDAIALLGALIMP---------------------------------- 251 Query: 182 H*QCFFIRHNLFLHSALVLSRKIPKSVNGINSACRYFLIESGFALLIAFFINVAVISVSG 361 HNLFLHSALVLSRKIP SV G+N ACRYFLIESGFAL +AF INVA+ISVSG Sbjct: 252 --------HNLFLHSALVLSRKIPNSVRGMNDACRYFLIESGFALFVAFLINVAIISVSG 303 Query: 362 TVCSEKNLSHDNKD 403 TVC + NLS N D Sbjct: 304 TVCHQSNLSDKNND 317 Score = 33.1 bits (74), Expect(2) = 6e-33 Identities = 14/17 (82%), Positives = 16/17 (94%) Frame = +1 Query: 403 SCKDITLNSASFLLQNV 453 +C D+TLNSASFLLQNV Sbjct: 318 TCSDLTLNSASFLLQNV 334