BLASTX nr result
ID: Coptis25_contig00020822
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00020822
(1951 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277087.1| PREDICTED: uncharacterized protein LOC100257... 231 7e-58
ref|XP_002326253.1| predicted protein [Populus trichocarpa] gi|2... 226 1e-56
ref|XP_002533547.1| DNA binding protein, putative [Ricinus commu... 220 9e-55
ref|XP_002893053.1| hypothetical protein ARALYDRAFT_312884 [Arab... 194 7e-47
gb|AAF79444.1|AC025808_26 F18O14.26 [Arabidopsis thaliana] 194 9e-47
>ref|XP_002277087.1| PREDICTED: uncharacterized protein LOC100257875 [Vitis vinifera]
gi|297740087|emb|CBI30269.3| unnamed protein product
[Vitis vinifera]
Length = 496
Score = 231 bits (588), Expect = 7e-58
Identities = 171/467 (36%), Positives = 248/467 (53%), Gaps = 21/467 (4%)
Frame = +2
Query: 245 ESENSSTSINWGNKRRRSLKRCVQNEPVPDG----KNFKSCSSDLVVVQEAPVEDNQSHK 412
ES + + WG+K +R KR P D N SSDL + V Q +
Sbjct: 60 ESNGAESGGKWGSKGKRGRKRVKSESPPSDEFKNPDNLFPGSSDLTEQDKQSVVQ-QECR 118
Query: 413 KVRKNVTTRTVKAEPDLELPRSTPQCSTSCVSSXXXXXXRPRHQLTEAEKEAKRIRRILA 592
K+ +NV K E D E + +P C+T+ + R LTEAEKEA+R+RR+LA
Sbjct: 119 KIDRNVFL--TKTETDDEFAKPSPMCTTTYAPHHSG---KLRQNLTEAEKEARRLRRVLA 173
Query: 593 NRESARQTIRRRQAMCDELTKKAADLALYNESMKREKELIMKEYQLLMDKNKLLKEQIAR 772
NRESARQTIRRRQA+C EL++KAADL+L NE++KREKEL MKE+Q L +KNK LK Q+A+
Sbjct: 174 NRESARQTIRRRQALCGELSRKAADLSLENETLKREKELAMKEFQSLENKNKHLKAQVAK 233
Query: 773 TIKAEKEEVP--LNTVKGVSSLSGKQQPLHVYNRPTITPFVW-SPMIQSLDPVHTQPLPD 943
IK E+E+ P +++ + S PL +YN+P+ TPF+W SP + + + +PD
Sbjct: 234 IIKPEEEKTPESISSHEMTSIPPSSNCPLLLYNQPSFTPFLWSSPERRFQNAFASHAVPD 293
Query: 944 DPTVSTCKRESSDEQGNSLGTTGPRSPFYIMPGQWFFPI---GNGLYPPPLESFCLLNKQ 1114
+ RE+ + R+P YI+P WFFP+ GNGL+ PP S L +KQ
Sbjct: 294 E-------RENPN-------IDAYRTPLYILPCPWFFPLPNHGNGLHLPP--SLNLKDKQ 337
Query: 1115 EDVSLVDPCDQGASLTDTQNNENHQLPSYREVIRDDFSPKENKSPDNR--------PDTS 1270
+ V+ C + + + E ++E + +P +R D S
Sbjct: 338 DAVN--SQCSASSLIKNKSGIETKPANKFQEASFEFLPDGHLITPHHRRMIPANNVHDLS 395
Query: 1271 IRLATSEENPLGASNHVLVSHRCVDPAMPNKCENTFQHD---SASKEESGSPTGSHTGTV 1441
+ + SN +++S P M K TF+H+ +S ++G G H +V
Sbjct: 396 YGFSPDAHHISSHSNAMILS---PSPLMSLKSAITFKHEGELQSSYVDNGE--GGHIVSV 450
Query: 1442 FPDNKWGLDAYKNKKLMEATVAAEARKRRKELTRLKNLNGRQVRLQC 1582
F + +K+L++A AAEARKRRKELT+LKNL+GR VR+ C
Sbjct: 451 FSEKNQEPVICSSKRLVDAVAAAEARKRRKELTKLKNLHGR-VRMHC 496
>ref|XP_002326253.1| predicted protein [Populus trichocarpa] gi|222833446|gb|EEE71923.1|
predicted protein [Populus trichocarpa]
Length = 485
Score = 226 bits (577), Expect = 1e-56
Identities = 166/465 (35%), Positives = 238/465 (51%), Gaps = 24/465 (5%)
Frame = +2
Query: 260 STSINWGNKRRRSLKRCVQNEPVPDGKNFKSCSSDLVVVQEAPVEDNQSHKKVRKNVTTR 439
S+ WG+K +R+ KR V + S SDL A V+ H V K
Sbjct: 41 SSGSEWGSKGKRARKR------VRAESDSVSTYSDLPRQDRAVVDQQPIHSNVVK----- 89
Query: 440 TVKAEPDLELPRSTPQCSTSCVSSXXXXXXRPRHQLTEAEKEAKRIRRILANRESARQTI 619
+ E D ++P+S+P C+TS S R R LTEAEKE +R+RRILANRESARQTI
Sbjct: 90 PARQELDADVPKSSPSCATSYPS---YGTGRSRLNLTEAEKEERRLRRILANRESARQTI 146
Query: 620 RRRQAMCDELTKKAADLALYNESMKREKELIMKEYQLLMDKNKLLKEQIARTIKAEKEEV 799
RRRQA+C+ELT+KAADL+ NE++K+EKEL +K YQ L NK LK Q+A+ IKAE E
Sbjct: 147 RRRQALCEELTRKAADLSWENENLKKEKELALKNYQSLETTNKHLKAQMAKQIKAEMEVS 206
Query: 800 P---LNTVKGVSSLSGKQQPLHVYNRPTITPFVWSPMIQSLDPVHT-------------Q 931
P + + + + + PL VYN+ +P W +IQS +P+ +
Sbjct: 207 PGDLKSALVDIPTTAPTNCPLLVYNQHAFSPHCWPSIIQSSNPIQSHYTTENAIVIPSNM 266
Query: 932 PLPDDPTVSTCKRESSDEQGNSLGTTGPRSPFYIMPGQWFFP---IGNGLYPPPLESFCL 1102
P+P + T + S +Q N++ +GPR+P Y++ WFFP GNGL+ P SF
Sbjct: 267 PMPTNGTHDS----SQLQQENTVIVSGPRTPLYVVSCPWFFPGPDHGNGLHAQP--SFSF 320
Query: 1103 LNKQEDVSLVDPCDQGASLTDTQNNENHQLPSYREVIRDDFSPKENKSPDNRPDTSIRLA 1282
++Q+ +SL + C +S EN V + S +E + ++ +T +
Sbjct: 321 KHRQDGISLNNLCCGSSSPKAAAPMENRHSSLSIIVKSETTSSEEVRVINDLNETPVGFT 380
Query: 1283 TSEENPLGASNH-----VLVSHRCVDPAMPNKCENTFQHDSASKEESGSPTGSHTGTVFP 1447
++ V V PA+ K E + + A S V P
Sbjct: 381 LYGGGQCEGTHPKEMILTPVPPTSVTPAVAVKNEAGQKSEHAFGANGICTKASQLRCVLP 440
Query: 1448 DNKWGLDAYKNKKLMEATVAAEARKRRKELTRLKNLNGRQVRLQC 1582
+ + +KKL++A AAEAR+RRKELT+LKNL+GRQ RL C
Sbjct: 441 EKNQDPFKFPSKKLVDAASAAEARRRRKELTKLKNLHGRQCRLNC 485
>ref|XP_002533547.1| DNA binding protein, putative [Ricinus communis]
gi|223526583|gb|EEF28837.1| DNA binding protein, putative
[Ricinus communis]
Length = 515
Score = 220 bits (561), Expect = 9e-55
Identities = 161/459 (35%), Positives = 234/459 (50%), Gaps = 23/459 (5%)
Frame = +2
Query: 275 WGNKRRRSLKRCVQNEPVPDGKNFKSCSSDLVVVQEAPVE---DNQSHKKVRKNVTTRTV 445
WG+K +R KR P D S + AP D Q + + + +
Sbjct: 66 WGSKGKRGKKRVKSESPPLDPFTKPVLDSLTNCLDPAPDPAPVDQQHDEPLCSDTVIKAA 125
Query: 446 KAEPDLELPRSTPQCSTSCVSSXXXXXXRPRHQLTEAEKEAKRIRRILANRESARQTIRR 625
K E D ++P+ + S + R R LTEAEKE +R+RRILANRESARQTIRR
Sbjct: 126 KVEQDADIPKPS---LVSVKNHPSYGGGRSRQNLTEAEKEERRLRRILANRESARQTIRR 182
Query: 626 RQAMCDELTKKAADLALYNESMKREKELIMKEYQLLMDKNKLLKEQIARTIKAEKEEVP- 802
RQA+C+ELT+KAADLA NE++KREKE ++KE+Q L +NK LK Q+A+ IK E E+ P
Sbjct: 183 RQALCEELTRKAADLAWENENLKREKESVLKEFQSLESRNKYLKAQMAKLIKTEVEDSPA 242
Query: 803 -LNTVKGVSSLS-GKQQPLHVYNRPTITPFVWSPMIQS-------LDPVHTQPLPDDPTV 955
L + +SL+ L +YN+ + W +IQS L P T +P ++
Sbjct: 243 DLKSAHVDNSLAPATNCSLLLYNQHPFSSLCWPSIIQSSNSVQSHLGPQSTIMIPSSISM 302
Query: 956 -STCKRESSDE-QGNSLGTTGPRSPFYIMPGQWFFPI---GNGLYPPPLESFCLLNKQED 1120
K +SS + Q N + T GPR+P YI+ WFFP+ NGL+P P SF L +KQ+
Sbjct: 303 PPNGKLDSSQQPQENPMITNGPRTPLYIVSCPWFFPVPEHANGLHPLP--SFGLQHKQDG 360
Query: 1121 VSLVDPCDQGASLTDTQNNENHQLPSYREVIRDDFSPKENKSPDNRPDTSIRLATSEENP 1300
S+ + C + +S T +N + +V +D +P N + +T + + +
Sbjct: 361 TSVNNQCSRTSSAKATALMQNQFSSASEKVNSEDGNPAIN----DLNETPVGVPPEGGSH 416
Query: 1301 LGASNH-----VLVSHRCVDPAMPNKCENTFQHDSASKEESGSPTGSHTGTVFPDNKWGL 1465
A NH V + P + K E + +S + T + P
Sbjct: 417 SAAPNHKETVVAPVMLSSITPTVAVKNETGTRSESVPHTDGICTTSKQLISALPGKNRDP 476
Query: 1466 DAYKNKKLMEATVAAEARKRRKELTRLKNLNGRQVRLQC 1582
+ +K L++A AA AR+RRKELT+LKNL+GRQ R+ C
Sbjct: 477 FKFPSKNLVDAAAAAVARRRRKELTKLKNLHGRQCRMNC 515
>ref|XP_002893053.1| hypothetical protein ARALYDRAFT_312884 [Arabidopsis lyrata subsp.
lyrata] gi|297338895|gb|EFH69312.1| hypothetical protein
ARALYDRAFT_312884 [Arabidopsis lyrata subsp. lyrata]
Length = 647
Score = 194 bits (493), Expect = 7e-47
Identities = 146/452 (32%), Positives = 217/452 (48%), Gaps = 13/452 (2%)
Frame = +2
Query: 263 TSINWGNKRRRSLKRCVQNEPVPDGKNFKSCSSDLVVVQEAPVED--NQSHKKVRKNVTT 436
++ +WG+K +R KR V+ E P K S+ + + E + ++ + +T
Sbjct: 235 SAASWGSKGKRVRKR-VKTESPPSDSLLKPPDSETLPTPDLAEERLVKEEEEEEVQPITK 293
Query: 437 RTVKAEPDLELPR----STPQCSTSCVSSXXXXXXRPRHQLTEAEKEAKRIRRILANRES 604
VK E + E P+ ST +CS S R R L+EAE+E +RIRRILANRES
Sbjct: 294 APVKTEMNGETPKLNLASTLRCSRS------NGCGRSRQNLSEAEREERRIRRILANRES 347
Query: 605 ARQTIRRRQAMCDELTKKAADLALYNESMKREKELIMKEYQLLMDKNKLLKEQIARTIKA 784
ARQTIRRRQAMC+EL+KKAADL NE+++REK+ +KE+Q L NK LKEQ+++++K
Sbjct: 348 ARQTIRRRQAMCEELSKKAADLTYENENLRREKDWALKEFQSLETINKHLKEQVSKSVKP 407
Query: 785 EKEEVPLNTVKGVSSLSGKQQPLHVYNRPTITPFVWSPMIQSLDPVHTQPLPDDPTVSTC 964
+ +E +T +S P + YN+ F W + QS +P + +
Sbjct: 408 DTKEPEESTKPSQVDMSTSSTPFYFYNQNPYQLFCWPHVTQSSNPTISPLEFATSGGPSA 467
Query: 965 KRESSDEQGNSLGTTGPRSPFYIMPGQWFFPIGNGLYPPPLES----FCLLNKQEDVSLV 1132
K +S E N G ++ FY++P WF PPP +S F L N Q
Sbjct: 468 KSMTSQEHENPADDNGQKTHFYVVPCPWFL-------PPPDQSNSVPFGLQNTQRGT--- 517
Query: 1133 DPCDQGASLTDTQNNENHQLPSYREVIRDDFSPKENKSPDNRPDTSIRLATSEENPLGAS 1312
G + D+ + R + +++ SP+ RP + + +E G
Sbjct: 518 --FSNGHHIDDSSARPIEVTETPRSHLPTRIKEEDSGSPETRPLYDLNESATEVLSEGGD 575
Query: 1313 NHVLVSHRCVDPAMPNKCENTFQHDSASKEESG---SPTGSHTGTVFPDNKWGLDAYKNK 1483
+ + + + +H+ S+ +G P G H P K G
Sbjct: 576 DFPITQQ-----------DYSLKHEDVSETTNGVTLMPPGHHVLISLPGKKQG------- 617
Query: 1484 KLMEATVAAEARKRRKELTRLKNLNGRQVRLQ 1579
+ AAEARKRRKELTRLKNL+GRQ R+Q
Sbjct: 618 ----SLAAAEARKRRKELTRLKNLHGRQCRMQ 645
>gb|AAF79444.1|AC025808_26 F18O14.26 [Arabidopsis thaliana]
Length = 639
Score = 194 bits (492), Expect = 9e-47
Identities = 149/455 (32%), Positives = 223/455 (49%), Gaps = 16/455 (3%)
Frame = +2
Query: 263 TSINWGNKRRRSLKRCVQNEPVPDGKNFKSCSSDLV----VVQEAPVEDNQSHKKVR--- 421
++ +WG+K +R KR V+ E P K SD + + +E V++ + ++V
Sbjct: 221 SAASWGSKGKRVRKR-VKTESPPSDSLLKPPDSDTLPTPDLAEERLVKEEEEEEEVEPIT 279
Query: 422 KNVTTRTVKAEPDLELPRSTPQCSTSCVSSXXXXXXRPRHQLTEAEKEAKRIRRILANRE 601
K +T VK+E + E P+ ST S R R L+EAE+E +RIRRILANRE
Sbjct: 280 KELTKAPVKSEINGETPKPI-LASTLIRCSRSNGCGRSRQNLSEAEREERRIRRILANRE 338
Query: 602 SARQTIRRRQAMCDELTKKAADLALYNESMKREKELIMKEYQLLMDKNKLLKEQIARTIK 781
SARQTIRRRQAMC+EL+KKAADL NE+++REK+ +KE+Q L NK LKEQ+ +++K
Sbjct: 339 SARQTIRRRQAMCEELSKKAADLTYENENLRREKDWALKEFQSLETINKHLKEQVLKSVK 398
Query: 782 AEKEEVPLNTVKGVSSLSGKQQPLHVYNRPTITPFVWSPMIQSLDPVHTQPLPDDPTV-- 955
+ +E + +S P + YN+ F W + QS +P+ PL + PT
Sbjct: 399 PDTKEPEESPKPSQVEMSTSSTPFYFYNQNPYQLFCWPHVTQSSNPM-ISPL-EFPTSGG 456
Query: 956 STCKRESSDEQGNSLGTTGPRSPFYIMPGQWFFPIGNGLYPPPLES----FCLLNKQEDV 1123
++ K ++ E N+ G ++ FY++P WF PPP S F L + Q
Sbjct: 457 ASAKTITTQEHENAADDNGQKTHFYVVPCPWFL-------PPPDHSNGVPFGLQDTQRGT 509
Query: 1124 SLVDPCDQGASLTDTQNNENHQLPSYREVIRDDFSPKENKSPDNRPDTSIRLATSEENPL 1303
G + D+ + R + +++ SP+ RP + + +E
Sbjct: 510 -----FSNGHHIDDSSARPMDVTETPRSHLPTRIKEEDSGSPETRPLYDLNESATEVLSE 564
Query: 1304 GASNHVLVSHRCVDPAMPNKCENTFQHDSASKEESG---SPTGSHTGTVFPDNKWGLDAY 1474
G + + +H+ S+ +G P G H P+ K G
Sbjct: 565 GGDGFPVTQQ-----------AYSLKHEDVSETTNGVTLMPPGHHVLISLPEKKHG---- 609
Query: 1475 KNKKLMEATVAAEARKRRKELTRLKNLNGRQVRLQ 1579
+ AAEARKRRKELTRLKNL+GRQ R+Q
Sbjct: 610 -------SLAAAEARKRRKELTRLKNLHGRQCRMQ 637