BLASTX nr result
ID: Coptis25_contig00020812
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00020812
(1625 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy... 152 3e-34
emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera] 149 2e-33
emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera] 140 7e-31
ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group] g... 131 6e-28
gb|EEC80541.1| hypothetical protein OsI_22839 [Oryza sativa Indi... 125 4e-26
>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
Group] gi|31431495|gb|AAP53268.1| retrotransposon
protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1230
Score = 152 bits (383), Expect = 3e-34
Identities = 134/516 (25%), Positives = 194/516 (37%), Gaps = 41/516 (7%)
Frame = -2
Query: 1426 LEQTNQTVNQTAQGVTRLETGSTXXXXXXXXXXXXXXXXXXALRRPDQEDWSKQVE---- 1259
+EQ N N T+Q G+T + QE +Q+E
Sbjct: 1 MEQNNNNNNGTSQDGNNTSHGATGLIIPSASNQDPWANLLANILGKQQETQQRQMEILER 60
Query: 1258 ------------RFLKMDPPKFGGTTDPSEAENWKEDMETLFSVMGYTGIQKQRLATVCL 1115
F K+ PP F GT +P EAE W ME F MG T +K AT L
Sbjct: 61 ITKSDANRNGLGEFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKIIYATYML 120
Query: 1114 RGDASIWWKSVSRA-DEHLLLTWTEFRQRFDLQYFPQSLRSAKTREFMALKQGMMTVFEY 938
+ A WW + ++ E + +TW F++ F +YFP+S++ K +EF+ LKQG +V EY
Sbjct: 121 QSSAFEWWDAHKKSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQGNKSVAEY 180
Query: 937 ETQFHRLSRLANRVYLDEAKKARQFEEGLADYLRPLVKTREHKTLREVIDAARILE---- 770
E +F RL+R A + KAR+FE GL L+ V+ E REV+ A++LE
Sbjct: 181 EIEFSRLARFAPEFVQTDGSKARRFESGLRQPLKRRVEAFELTIFREVVSKAQLLEKGYH 240
Query: 769 QDHIDH--PTTIDTNKYEXXXXXXXXXXXXXXXXXXXXXKXXXXXXXXXXXXTEDRPPFY 596
+ I+H P + P +
Sbjct: 241 EQRIEHGQPQKKFKTNNPQNQGRFRGNYSGQMQRKSSENQGRKCPICQGSHVPSICPNCW 300
Query: 595 GHCYNCGDQGHVARDCKKPKVRRSKHXXXXXXXXXXXXXXXXXXXXXXXGFHSGYGGGQP 416
G C+ CG+ GH C P +++ K+ QP
Sbjct: 301 GRCFECGEAGHTRYQC--PLLQKGKNRVSSTT--------------------------QP 332
Query: 415 GQAIEPAQGQVYALAPREPIPAIPMXXXXXXXXXXXVLSRDNGANG-------------- 278
+ +Y P P R N + G
Sbjct: 333 NTKVLTPVPSLYLPGPSSANNHGPNQGKPLANTNTTRGMRSNNSQGGNHARVYNLTKSTA 392
Query: 277 ----AVIEGIFLIHRRHARILFDSGASHSFISHTFMLGLAIVPDMLVLPLEVITPLGETT 110
V+ G LI ++LFDSGA+HSFIS F+ I L + + TPL T
Sbjct: 393 EESNTVVTGNVLICSYPGKVLFDSGATHSFISTNFVRKYTIPTSQLKERICIETPLDSQT 452
Query: 109 ILDRVCRQCSVSMDDLELPIDLIVLCML*CDIGYGL 2
+ +C+ C +++D EL DLI L M DI G+
Sbjct: 453 -TNLICKLCPITIDGWELTADLIPLDMHDFDIILGM 487
>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
Length = 1573
Score = 149 bits (376), Expect = 2e-33
Identities = 116/441 (26%), Positives = 184/441 (41%), Gaps = 20/441 (4%)
Frame = -2
Query: 1264 VERFLKMDPPKFGGTTDPSEAENWKEDMETLFSVMGYTGIQKQRLATVCLRGDASIWWKS 1085
++RF+ M PP F G +E+W M + + ++ LAT L A WW+S
Sbjct: 207 MKRFMVMQPPSFNGEPSAEASEHWLRRMRRILVGLDIPEERRVGLATYMLVDKADFWWES 266
Query: 1084 VSRADEHLLLTWTEFRQRFDLQYFPQSLRSAKTREFMALKQGMMTVFEYETQFHRLSRLA 905
+ R + ++TW EF + F +YF + + AK EF L QG M V EYE++F LSR A
Sbjct: 267 MKRVYDTEVMTWEEFERIFLGKYFGEVAKHAKRMEFEHLIQGTMLVLEYESRFSELSRFA 326
Query: 904 NRVYLDEAKKARQFEEGLADYLRPLVKTREHKTLREVIDAARILEQDHIDHPTTIDTNKY 725
+ +E +KAR+F++GL +R + + E++ A ++EQD ID I K
Sbjct: 327 LGMISEEGEKARRFQQGLRPIIRNRLVPLAIRDYSELVKRALLVEQD-IDETNQIREQKG 385
Query: 724 EXXXXXXXXXXXXXXXXXXXXXKXXXXXXXXXXXXTEDRPPFYGH-------------CY 584
+ E RP FY CY
Sbjct: 386 D------------KKGKQRMGESSQGPQQRQRTQQFERRPSFYAGEGQIAQRAATNRVCY 433
Query: 583 NCGDQGHVARDC-------KKPKVRRSKHXXXXXXXXXXXXXXXXXXXXXXXGFHSGYGG 425
CG H+ R C +P+ + S S G
Sbjct: 434 GCGAGDHLWRACPLRGAQXAQPQSQGSSQQQPMPQLPPAAQGTRTTTMNSQT--RSSQGS 491
Query: 424 GQPGQAIEPAQGQVYALAPREPIPAIPMXXXXXXXXXXXVLSRDNGANGAVIEGIFLIHR 245
G+ PA G+V+AL P EP + ++EG+ L++
Sbjct: 492 NARGRG-RPAAGRVFALTPTEP-----------------------DKDALLVEGMILVYS 527
Query: 244 RHARILFDSGASHSFISHTFMLGLAIVPDMLVLPLEVITPLGETTILDRVCRQCSVSMDD 65
R+LFD+GA+HSFIS + L + + + L + +P+G + +DR+C+ C +++ D
Sbjct: 528 TWVRVLFDTGATHSFISASCANALGLKSERVENLLLIESPMGTNSRVDRICKGCVITLAD 587
Query: 64 LELPIDLIVLCML*CDIGYGL 2
L +DL +L M D+ G+
Sbjct: 588 RALNVDLRILDMTGYDVILGM 608
>emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
Length = 1387
Score = 140 bits (354), Expect = 7e-31
Identities = 110/437 (25%), Positives = 186/437 (42%), Gaps = 16/437 (3%)
Frame = -2
Query: 1264 VERFLKMDPPKFGGTTDPSEAENWKEDMETLFSVMGYTGIQKQRLATVCLRGDASIWWKS 1085
++RF+ M PP F G AE+W M + + ++ LAT L A WW+S
Sbjct: 52 MKRFMVMQPPSFNGEPSAEAAEHWLXRMRRILVGLDIPEERRVGLATYMLVDKADFWWES 111
Query: 1084 VSRADEHLLLTWTEFRQRFDLQYFPQSLRSAKTREFMALKQGMMTVFEYETQFHRLSRLA 905
+ R + ++TW EF + F +YF + + AK EF L QG M+V EYE++F LSR A
Sbjct: 112 MKRVYDTEVMTWEEFERIFLGKYFGEVAKHAKRMEFEHLIQGTMSVLEYESRFSELSRFA 171
Query: 904 NRVYLDEAKKARQFEEGLADYLRPLVKTREHKTLREVIDAARILEQDHIDHPTTIDTNKY 725
+ +E +KAR+F++GL +R + + E++ A ++EQD ID I K
Sbjct: 172 LGMISEEGEKARRFQQGLRPAIRNRLVPLAIRDYSELVKRALLVEQD-IDETNQIREKKR 230
Query: 724 EXXXXXXXXXXXXXXXXXXXXXKXXXXXXXXXXXXTEDRPPFYGH-------------CY 584
+ E RP FY CY
Sbjct: 231 D------------RKGKQRMGESSQGPQQRQRTQQFERRPSFYAEGGQIAQRAAANRVCY 278
Query: 583 NCGDQGHVARDCKKPKVRRSKHXXXXXXXXXXXXXXXXXXXXXXXGFHSGYGGGQPGQAI 404
CG H+ R C ++++ G Q +
Sbjct: 279 GCGAGDHLWRACPLRDTQQARPQ------------------------SQGSSQQQSVVSF 314
Query: 403 EPAQGQVYALAPREPIPAIPMXXXXXXXXXXXVLS---RDNGANGAVIEGIFLIHRRHAR 233
+P Q Q+ P +P +P V + ++ + +++G+ L++ R
Sbjct: 315 QPPQFQL----PYYQMPQLPPTTGRGRQAAGRVFALTPTESEEDALLVKGMILVYSTWVR 370
Query: 232 ILFDSGASHSFISHTFMLGLAIVPDMLVLPLEVITPLGETTILDRVCRQCSVSMDDLELP 53
+LFD+GA+HSFIS + L + + + L + +P+G + +DR+C+ C +++ + L
Sbjct: 371 VLFDTGATHSFISASCANALGLKSERVENLLLIESPMGTNSRVDRICKGCVITLANRALN 430
Query: 52 IDLIVLCML*CDIGYGL 2
+DL +L M D+ G+
Sbjct: 431 VDLRILDMTGYDVILGM 447
>ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group]
gi|255679330|dbj|BAH94833.1| Os10g0357350 [Oryza sativa
Japonica Group]
Length = 443
Score = 131 bits (329), Expect = 6e-28
Identities = 81/248 (32%), Positives = 117/248 (47%), Gaps = 17/248 (6%)
Frame = -2
Query: 1429 LLEQTNQTVNQTAQGVTRLETGSTXXXXXXXXXXXXXXXXXXALRRPDQEDWSKQVE--- 1259
++EQ N N T+Q G+T + QE +Q+E
Sbjct: 88 IMEQNNNNNNGTSQDGNNTSHGATGLIIPSASNQDPWANLLANILGKQQETQQRQMEILE 147
Query: 1258 -------------RFLKMDPPKFGGTTDPSEAENWKEDMETLFSVMGYTGIQKQRLATVC 1118
F K+ PP F GT +P EAE W ME F MG T +K AT
Sbjct: 148 RITKSDANRNGLGEFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKIIYATYM 207
Query: 1117 LRGDASIWWKSVSRA-DEHLLLTWTEFRQRFDLQYFPQSLRSAKTREFMALKQGMMTVFE 941
L+ A WW + ++ E + +TW F++ F +YFP+S++ K +EF+ LKQG +V E
Sbjct: 208 LQSSAFEWWDAHKKSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQGNKSVAE 267
Query: 940 YETQFHRLSRLANRVYLDEAKKARQFEEGLADYLRPLVKTREHKTLREVIDAARILEQDH 761
YE +F RL+R A + KAR+FE GL L+ V+ E REV+ A++LE+
Sbjct: 268 YEIEFSRLARFAPEFVQTDGSKARRFESGLRQPLKRRVEAFELTIFREVVSKAQLLEKGE 327
Query: 760 IDHPTTID 737
TT+D
Sbjct: 328 DSVETTLD 335
>gb|EEC80541.1| hypothetical protein OsI_22839 [Oryza sativa Indica Group]
Length = 285
Score = 125 bits (313), Expect = 4e-26
Identities = 66/166 (39%), Positives = 97/166 (58%), Gaps = 1/166 (0%)
Frame = -2
Query: 1255 FLKMDPPKFGGTTDPSEAENWKEDMETLFSVMGYTGIQKQRLATVCLRGDASIWWKSVSR 1076
F K+ PP F GT +P +AE+W ME F MGYT +K AT L+ A WW + +
Sbjct: 56 FQKLKPPTFSGTANPPKAEDWIVAMEKAFEAMGYTDKEKIIYATYMLQSSAFEWWDAHKK 115
Query: 1075 A-DEHLLLTWTEFRQRFDLQYFPQSLRSAKTREFMALKQGMMTVFEYETQFHRLSRLANR 899
+ E + +TW F++ F +YFP+S++ K +EF+ LKQ +V EYE +F RL+RLA
Sbjct: 116 SYSERISITWELFKEAFCKKYFPESVKRMKEKEFLELKQCNKSVAEYEIEFSRLARLAPE 175
Query: 898 VYLDEAKKARQFEEGLADYLRPLVKTREHKTLREVIDAARILEQDH 761
+ KAR+FE GL L+ V+ E REV+ A++LE+ +
Sbjct: 176 FVQMDGSKARRFESGLRQPLKRCVEAFELTIFREVVSKAQLLEEGY 221