BLASTX nr result

ID: Coptis25_contig00020804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020804
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527766.1| PREDICTED: galactose oxidase-like [Glycine max]    45   2e-09
ref|XP_004147869.1| PREDICTED: galactose oxidase-like [Cucumis s...    49   3e-09
gb|AET97563.1| galactose oxidase [Ziziphus jujuba]                     50   6e-09
ref|XP_003561804.1| PREDICTED: galactose oxidase-like [Brachypod...    45   8e-08
ref|XP_002468154.1| hypothetical protein SORBIDRAFT_01g040550 [S...    45   1e-07

>ref|XP_003527766.1| PREDICTED: galactose oxidase-like [Glycine max]
          Length = 558

 Score = 45.1 bits (105), Expect(2) = 2e-09
 Identities = 19/30 (63%), Positives = 26/30 (86%)
 Frame = -1

Query: 114 LLNNNRVIIFDRIDFGQLNISLPNGKCVND 25
           LL+N+RVIIFDR DFG  N++LP+G+C N+
Sbjct: 60  LLHNDRVIIFDRTDFGLSNLTLPDGRCRNN 89



 Score = 42.0 bits (97), Expect(2) = 2e-09
 Identities = 26/51 (50%), Positives = 30/51 (58%)
 Frame = -3

Query: 268 TRMSRSSILSCLLWHFIFIAGLLHQNLSNAAGGGQWLLLQNNVGRNAMHMQ 116
           T MS SS L  LL   I I  +LH + + AA  GQW LL  N+G  AMHMQ
Sbjct: 10  TPMSTSSPLFLLLI-IIIIIPILHFHAAEAAAKGQWQLLHKNIGIVAMHMQ 59


>ref|XP_004147869.1| PREDICTED: galactose oxidase-like [Cucumis sativus]
           gi|449527693|ref|XP_004170844.1| PREDICTED: galactose
           oxidase-like [Cucumis sativus]
          Length = 548

 Score = 48.9 bits (115), Expect(2) = 3e-09
 Identities = 21/38 (55%), Positives = 28/38 (73%)
 Frame = -1

Query: 114 LLNNNRVIIFDRIDFGQLNISLPNGKCVNDRRGLGKVD 1
           LL N+RV+++DR DFG  N+SLP GKC+ D +   KVD
Sbjct: 48  LLQNDRVVMYDRTDFGPSNLSLPGGKCLRDPKAKIKVD 85



 Score = 37.4 bits (85), Expect(2) = 3e-09
 Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = -3

Query: 220 IFIAGLLHQNLS-NAAGGGQWLLLQNNVGRNAMHMQ 116
           IF   LL  +LS   A GG W+LLQ +VG +AMHMQ
Sbjct: 12  IFTNLLLFSSLSPTTAAGGSWMLLQRSVGISAMHMQ 47


>gb|AET97563.1| galactose oxidase [Ziziphus jujuba]
          Length = 545

 Score = 50.1 bits (118), Expect(2) = 6e-09
 Identities = 22/30 (73%), Positives = 25/30 (83%)
 Frame = -1

Query: 114 LLNNNRVIIFDRIDFGQLNISLPNGKCVND 25
           LLNN+RV+IFDR DFG  N+SLP GKC ND
Sbjct: 47  LLNNDRVVIFDRTDFGPSNLSLPAGKCRND 76



 Score = 35.0 bits (79), Expect(2) = 6e-09
 Identities = 23/49 (46%), Positives = 27/49 (55%)
 Frame = -3

Query: 262 MSRSSILSCLLWHFIFIAGLLHQNLSNAAGGGQWLLLQNNVGRNAMHMQ 116
           M  + ILS L     F AG     L   A GGQW LLQ ++G +AMHMQ
Sbjct: 1   MKPALILSFLFLLPHFFAG---PPLFADAAGGQWQLLQKSIGISAMHMQ 46


>ref|XP_003561804.1| PREDICTED: galactose oxidase-like [Brachypodium distachyon]
          Length = 569

 Score = 44.7 bits (104), Expect(2) = 8e-08
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = -1

Query: 114 LLNNNRVIIFDRIDFGQLNISLPNGKC 34
           LL N+RVIIFDR DFG  N+SLP+G+C
Sbjct: 51  LLRNDRVIIFDRTDFGPSNLSLPDGRC 77



 Score = 36.6 bits (83), Expect(2) = 8e-08
 Identities = 15/35 (42%), Positives = 25/35 (71%)
 Frame = -3

Query: 211 AGLLHQNLSNAAGGGQWLLLQNNVGRNAMHMQFTK 107
           AG+     + A+GGG+W +LQ+++G +AMHMQ  +
Sbjct: 19  AGIAPPAAAAASGGGRWDILQHSIGVSAMHMQLLR 53


>ref|XP_002468154.1| hypothetical protein SORBIDRAFT_01g040550 [Sorghum bicolor]
           gi|241922008|gb|EER95152.1| hypothetical protein
           SORBIDRAFT_01g040550 [Sorghum bicolor]
          Length = 585

 Score = 45.1 bits (105), Expect(2) = 1e-07
 Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
 Frame = -1

Query: 114 LLNNNRVIIFDRIDFGQLNISLPNGKC-VNDR 22
           LL+N+RVIIFDR DFG  N+SLP+G C VN R
Sbjct: 64  LLHNDRVIIFDRTDFGSSNLSLPDGHCRVNPR 95



 Score = 35.4 bits (80), Expect(2) = 1e-07
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = -3

Query: 187 SNAAGGGQWLLLQNNVGRNAMHMQ 116
           ++ AGGG+W LLQ ++G +AMHMQ
Sbjct: 40  ASGAGGGRWDLLQRSIGVSAMHMQ 63


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