BLASTX nr result
ID: Coptis25_contig00020804
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020804 (372 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003527766.1| PREDICTED: galactose oxidase-like [Glycine max] 45 2e-09 ref|XP_004147869.1| PREDICTED: galactose oxidase-like [Cucumis s... 49 3e-09 gb|AET97563.1| galactose oxidase [Ziziphus jujuba] 50 6e-09 ref|XP_003561804.1| PREDICTED: galactose oxidase-like [Brachypod... 45 8e-08 ref|XP_002468154.1| hypothetical protein SORBIDRAFT_01g040550 [S... 45 1e-07 >ref|XP_003527766.1| PREDICTED: galactose oxidase-like [Glycine max] Length = 558 Score = 45.1 bits (105), Expect(2) = 2e-09 Identities = 19/30 (63%), Positives = 26/30 (86%) Frame = -1 Query: 114 LLNNNRVIIFDRIDFGQLNISLPNGKCVND 25 LL+N+RVIIFDR DFG N++LP+G+C N+ Sbjct: 60 LLHNDRVIIFDRTDFGLSNLTLPDGRCRNN 89 Score = 42.0 bits (97), Expect(2) = 2e-09 Identities = 26/51 (50%), Positives = 30/51 (58%) Frame = -3 Query: 268 TRMSRSSILSCLLWHFIFIAGLLHQNLSNAAGGGQWLLLQNNVGRNAMHMQ 116 T MS SS L LL I I +LH + + AA GQW LL N+G AMHMQ Sbjct: 10 TPMSTSSPLFLLLI-IIIIIPILHFHAAEAAAKGQWQLLHKNIGIVAMHMQ 59 >ref|XP_004147869.1| PREDICTED: galactose oxidase-like [Cucumis sativus] gi|449527693|ref|XP_004170844.1| PREDICTED: galactose oxidase-like [Cucumis sativus] Length = 548 Score = 48.9 bits (115), Expect(2) = 3e-09 Identities = 21/38 (55%), Positives = 28/38 (73%) Frame = -1 Query: 114 LLNNNRVIIFDRIDFGQLNISLPNGKCVNDRRGLGKVD 1 LL N+RV+++DR DFG N+SLP GKC+ D + KVD Sbjct: 48 LLQNDRVVMYDRTDFGPSNLSLPGGKCLRDPKAKIKVD 85 Score = 37.4 bits (85), Expect(2) = 3e-09 Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 1/36 (2%) Frame = -3 Query: 220 IFIAGLLHQNLS-NAAGGGQWLLLQNNVGRNAMHMQ 116 IF LL +LS A GG W+LLQ +VG +AMHMQ Sbjct: 12 IFTNLLLFSSLSPTTAAGGSWMLLQRSVGISAMHMQ 47 >gb|AET97563.1| galactose oxidase [Ziziphus jujuba] Length = 545 Score = 50.1 bits (118), Expect(2) = 6e-09 Identities = 22/30 (73%), Positives = 25/30 (83%) Frame = -1 Query: 114 LLNNNRVIIFDRIDFGQLNISLPNGKCVND 25 LLNN+RV+IFDR DFG N+SLP GKC ND Sbjct: 47 LLNNDRVVIFDRTDFGPSNLSLPAGKCRND 76 Score = 35.0 bits (79), Expect(2) = 6e-09 Identities = 23/49 (46%), Positives = 27/49 (55%) Frame = -3 Query: 262 MSRSSILSCLLWHFIFIAGLLHQNLSNAAGGGQWLLLQNNVGRNAMHMQ 116 M + ILS L F AG L A GGQW LLQ ++G +AMHMQ Sbjct: 1 MKPALILSFLFLLPHFFAG---PPLFADAAGGQWQLLQKSIGISAMHMQ 46 >ref|XP_003561804.1| PREDICTED: galactose oxidase-like [Brachypodium distachyon] Length = 569 Score = 44.7 bits (104), Expect(2) = 8e-08 Identities = 19/27 (70%), Positives = 23/27 (85%) Frame = -1 Query: 114 LLNNNRVIIFDRIDFGQLNISLPNGKC 34 LL N+RVIIFDR DFG N+SLP+G+C Sbjct: 51 LLRNDRVIIFDRTDFGPSNLSLPDGRC 77 Score = 36.6 bits (83), Expect(2) = 8e-08 Identities = 15/35 (42%), Positives = 25/35 (71%) Frame = -3 Query: 211 AGLLHQNLSNAAGGGQWLLLQNNVGRNAMHMQFTK 107 AG+ + A+GGG+W +LQ+++G +AMHMQ + Sbjct: 19 AGIAPPAAAAASGGGRWDILQHSIGVSAMHMQLLR 53 >ref|XP_002468154.1| hypothetical protein SORBIDRAFT_01g040550 [Sorghum bicolor] gi|241922008|gb|EER95152.1| hypothetical protein SORBIDRAFT_01g040550 [Sorghum bicolor] Length = 585 Score = 45.1 bits (105), Expect(2) = 1e-07 Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 1/32 (3%) Frame = -1 Query: 114 LLNNNRVIIFDRIDFGQLNISLPNGKC-VNDR 22 LL+N+RVIIFDR DFG N+SLP+G C VN R Sbjct: 64 LLHNDRVIIFDRTDFGSSNLSLPDGHCRVNPR 95 Score = 35.4 bits (80), Expect(2) = 1e-07 Identities = 14/24 (58%), Positives = 20/24 (83%) Frame = -3 Query: 187 SNAAGGGQWLLLQNNVGRNAMHMQ 116 ++ AGGG+W LLQ ++G +AMHMQ Sbjct: 40 ASGAGGGRWDLLQRSIGVSAMHMQ 63