BLASTX nr result

ID: Coptis25_contig00020801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020801
         (1237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39060.3| unnamed protein product [Vitis vinifera]              409   e-112
ref|XP_002265056.1| PREDICTED: uncharacterized protein LOC100261...   409   e-112
emb|CAN63618.1| hypothetical protein VITISV_038963 [Vitis vinifera]   409   e-112
ref|XP_002319149.1| predicted protein [Populus trichocarpa] gi|2...   403   e-110
ref|XP_002525722.1| conserved hypothetical protein [Ricinus comm...   402   e-110

>emb|CBI39060.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score =  409 bits (1052), Expect = e-112
 Identities = 208/281 (74%), Positives = 228/281 (81%), Gaps = 5/281 (1%)
 Frame = +2

Query: 410  MDGLVSHLEHK-TQQMPARKCASGGP-KDMWCVAREGSLSEVDSALAFLKKNGGNIDARN 583
            M+GLV     K      ARK  S     D+W + REGSL++VD AL  LKKNGGNI++RN
Sbjct: 1    MEGLVPPPGQKQNHHTAARKIVSSASLTDLWLLVREGSLADVDLALVQLKKNGGNINSRN 60

Query: 584  VFGLTPLHIATWRNNIPIVRRLIAAGADPDARDGESGWSSLHRALYFGHLAVASILLQSG 763
             FGLTPLHIATWRN+IPIVRRL+AAGADPDARDGESGWSSLHRAL+FGHLAVASILLQSG
Sbjct: 61   SFGLTPLHIATWRNHIPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASILLQSG 120

Query: 764  GSLMLEDSKRRIPIDLLSGPVLQVTGSERNA---EVFSWGSGVNYQLGTGNAHIQKLPCR 934
             S+ LEDS+ RIP+DL+SGPV QV GSER++   E+FSWGSGVNYQLGTGN HIQKLPC+
Sbjct: 121  ASITLEDSRSRIPVDLVSGPVFQVVGSERDSVATELFSWGSGVNYQLGTGNTHIQKLPCK 180

Query: 935  VDALQGLSIKMVSAAKFHSVAVGTRGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVT 1114
            VD+L G  IK VSAAKFHSVAV  RGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVT
Sbjct: 181  VDSLHGTFIKSVSAAKFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVT 240

Query: 1115 CGLGSXXXXXXXXXXXXTVITTEGGEVFTWGSNREGQLGYT 1237
             GLGS            TV+ TEGGEVFTWGSNREGQLGYT
Sbjct: 241  MGLGSRRVKAIAAAKHHTVVATEGGEVFTWGSNREGQLGYT 281



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 42/117 (35%), Positives = 58/117 (49%)
 Frame = +2

Query: 857  EVFSWGSGVNYQLGTGNAHIQKLPCRVDALQGLSIKMVSAAKFHSVAVGTRGEVYTWGFG 1036
            EVF+WGS    QLG  +   Q +P RV +L+   I  V+AA  H+  +   GEV+TWG  
Sbjct: 266  EVFTWGSNREGQLGYTSVDTQPIPRRVSSLKS-KIVAVAAANKHTAVISESGEVFTWGCN 324

Query: 1037 RGGRLGHPEFDIHSGQAAVITPRQVTCGLGSXXXXXXXXXXXXTVITTEGGEVFTWG 1207
            + G+LG+      S  A+  TPR V   L              T++    GE+FTWG
Sbjct: 325  KKGQLGYGT----SNSASNYTPRVVEY-LKGKVLKGVAAAKYHTIVLGADGEIFTWG 376


>ref|XP_002265056.1| PREDICTED: uncharacterized protein LOC100261641 [Vitis vinifera]
          Length = 1076

 Score =  409 bits (1052), Expect = e-112
 Identities = 208/281 (74%), Positives = 228/281 (81%), Gaps = 5/281 (1%)
 Frame = +2

Query: 410  MDGLVSHLEHK-TQQMPARKCASGGP-KDMWCVAREGSLSEVDSALAFLKKNGGNIDARN 583
            M+GLV     K      ARK  S     D+W + REGSL++VD AL  LKKNGGNI++RN
Sbjct: 1    MEGLVPPPGQKQNHHTAARKIVSSASLTDLWLLVREGSLADVDLALVQLKKNGGNINSRN 60

Query: 584  VFGLTPLHIATWRNNIPIVRRLIAAGADPDARDGESGWSSLHRALYFGHLAVASILLQSG 763
             FGLTPLHIATWRN+IPIVRRL+AAGADPDARDGESGWSSLHRAL+FGHLAVASILLQSG
Sbjct: 61   SFGLTPLHIATWRNHIPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASILLQSG 120

Query: 764  GSLMLEDSKRRIPIDLLSGPVLQVTGSERNA---EVFSWGSGVNYQLGTGNAHIQKLPCR 934
             S+ LEDS+ RIP+DL+SGPV QV GSER++   E+FSWGSGVNYQLGTGN HIQKLPC+
Sbjct: 121  ASITLEDSRSRIPVDLVSGPVFQVVGSERDSVATELFSWGSGVNYQLGTGNTHIQKLPCK 180

Query: 935  VDALQGLSIKMVSAAKFHSVAVGTRGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVT 1114
            VD+L G  IK VSAAKFHSVAV  RGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVT
Sbjct: 181  VDSLHGTFIKSVSAAKFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVT 240

Query: 1115 CGLGSXXXXXXXXXXXXTVITTEGGEVFTWGSNREGQLGYT 1237
             GLGS            TV+ TEGGEVFTWGSNREGQLGYT
Sbjct: 241  MGLGSRRVKAIAAAKHHTVVATEGGEVFTWGSNREGQLGYT 281



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 42/117 (35%), Positives = 58/117 (49%)
 Frame = +2

Query: 857  EVFSWGSGVNYQLGTGNAHIQKLPCRVDALQGLSIKMVSAAKFHSVAVGTRGEVYTWGFG 1036
            EVF+WGS    QLG  +   Q +P RV +L+   I  V+AA  H+  +   GEV+TWG  
Sbjct: 266  EVFTWGSNREGQLGYTSVDTQPIPRRVSSLKS-KIVAVAAANKHTAVISESGEVFTWGCN 324

Query: 1037 RGGRLGHPEFDIHSGQAAVITPRQVTCGLGSXXXXXXXXXXXXTVITTEGGEVFTWG 1207
            + G+LG+      S  A+  TPR V   L              T++    GE+FTWG
Sbjct: 325  KKGQLGYGT----SNSASNYTPRVVEY-LKGKVLKGVAAAKYHTIVLGADGEIFTWG 376


>emb|CAN63618.1| hypothetical protein VITISV_038963 [Vitis vinifera]
          Length = 653

 Score =  409 bits (1052), Expect = e-112
 Identities = 208/281 (74%), Positives = 228/281 (81%), Gaps = 5/281 (1%)
 Frame = +2

Query: 410  MDGLVSHLEHK-TQQMPARKCASGGP-KDMWCVAREGSLSEVDSALAFLKKNGGNIDARN 583
            M+GLV     K      ARK  S     D+W + REGSL++VD AL  LKKNGGNI++RN
Sbjct: 1    MEGLVPPPGQKQNHHTAARKIVSSASLTDLWLLVREGSLADVDLALVQLKKNGGNINSRN 60

Query: 584  VFGLTPLHIATWRNNIPIVRRLIAAGADPDARDGESGWSSLHRALYFGHLAVASILLQSG 763
             FGLTPLHIATWRN+IPIVRRL+AAGADPDARDGESGWSSLHRAL+FGHLAVASILLQSG
Sbjct: 61   SFGLTPLHIATWRNHIPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASILLQSG 120

Query: 764  GSLMLEDSKRRIPIDLLSGPVLQVTGSERNA---EVFSWGSGVNYQLGTGNAHIQKLPCR 934
             S+ LEDS+ RIP+DL+SGPV QV GSER++   E+FSWGSGVNYQLGTGN HIQKLPC+
Sbjct: 121  ASITLEDSRSRIPVDLVSGPVFQVVGSERDSVATELFSWGSGVNYQLGTGNTHIQKLPCK 180

Query: 935  VDALQGLSIKMVSAAKFHSVAVGTRGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVT 1114
            VD+L G  IK VSAAKFHSVAV  RGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVT
Sbjct: 181  VDSLHGTFIKSVSAAKFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVT 240

Query: 1115 CGLGSXXXXXXXXXXXXTVITTEGGEVFTWGSNREGQLGYT 1237
             GLGS            TV+ TEGGEVFTWGSNREGQLGYT
Sbjct: 241  MGLGSRRVKAIAAAKHHTVVATEGGEVFTWGSNREGQLGYT 281



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 42/117 (35%), Positives = 58/117 (49%)
 Frame = +2

Query: 857  EVFSWGSGVNYQLGTGNAHIQKLPCRVDALQGLSIKMVSAAKFHSVAVGTRGEVYTWGFG 1036
            EVF+WGS    QLG  +   Q +P RV +L+   I  V+AA  H+  +   GEV+TWG  
Sbjct: 266  EVFTWGSNREGQLGYTSVDTQPIPRRVSSLKS-KIVAVAAANKHTAVISESGEVFTWGCN 324

Query: 1037 RGGRLGHPEFDIHSGQAAVITPRQVTCGLGSXXXXXXXXXXXXTVITTEGGEVFTWG 1207
            + G+LG+      S  A+  TPR V   L              T++    GE+FTWG
Sbjct: 325  KKGQLGYGT----SNSASNYTPRVVEY-LKGKVLKGVAAAKYHTIVLGADGEIFTWG 376


>ref|XP_002319149.1| predicted protein [Populus trichocarpa] gi|222857525|gb|EEE95072.1|
            predicted protein [Populus trichocarpa]
          Length = 1075

 Score =  403 bits (1035), Expect = e-110
 Identities = 208/281 (74%), Positives = 225/281 (80%), Gaps = 5/281 (1%)
 Frame = +2

Query: 410  MDGLVSHLEHKTQ-QMPARKCASGGP-KDMWCVAREGSLSEVDSALAFLKKNGGNIDARN 583
            M+ LVS    K   Q  A+K +SGG  KD+W V REGSL++VD ALA  KKNGGNI+ARN
Sbjct: 1    MEVLVSPQGQKYNLQTAAQKFSSGGSQKDLWHVVREGSLADVDLALALHKKNGGNINARN 60

Query: 584  VFGLTPLHIATWRNNIPIVRRLIAAGADPDARDGESGWSSLHRALYFGHLAVASILLQSG 763
            VFGLTPLHIATWRN+IPIV+RL+ AGADPDARDGESGWSSLHRAL+FGHLAVASILLQSG
Sbjct: 61   VFGLTPLHIATWRNHIPIVKRLLLAGADPDARDGESGWSSLHRALHFGHLAVASILLQSG 120

Query: 764  GSLMLEDSKRRIPIDLLSGPVLQVTGSERNA---EVFSWGSGVNYQLGTGNAHIQKLPCR 934
             S  LED K R P+DLLSGPVLQV     N+   EVFSWGSG NYQLGTGN HIQKLPC+
Sbjct: 121  ASTTLEDCKSRTPVDLLSGPVLQVIRDGYNSVATEVFSWGSGANYQLGTGNTHIQKLPCK 180

Query: 935  VDALQGLSIKMVSAAKFHSVAVGTRGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVT 1114
            VDAL G  +K+VSAAKFHS AV   GEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVT
Sbjct: 181  VDALHGSFVKLVSAAKFHSAAVSASGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVT 240

Query: 1115 CGLGSXXXXXXXXXXXXTVITTEGGEVFTWGSNREGQLGYT 1237
             GLGS            TV+ TEGGEVFTWGSNREGQLGYT
Sbjct: 241  SGLGSRRVKAIAAAKHHTVLATEGGEVFTWGSNREGQLGYT 281



 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 45/117 (38%), Positives = 57/117 (48%)
 Frame = +2

Query: 857  EVFSWGSGVNYQLGTGNAHIQKLPCRVDALQGLSIKMVSAAKFHSVAVGTRGEVYTWGFG 1036
            EVF+WGS    QLG      Q  P RV +L+   I  V+AA  H+  V   GEV+TWG  
Sbjct: 266  EVFTWGSNREGQLGY-TVDTQPTPRRVSSLRS-RIVAVAAANKHTAVVSDSGEVFTWGCN 323

Query: 1037 RGGRLGHPEFDIHSGQAAVITPRQVTCGLGSXXXXXXXXXXXXTVITTEGGEVFTWG 1207
            R G+LG+      S  A+  TPR V   L              T++   GGEV+TWG
Sbjct: 324  REGQLGYGT----SNSASNYTPRAVEY-LKGKVLTGVSVAKYHTIVLGAGGEVYTWG 375


>ref|XP_002525722.1| conserved hypothetical protein [Ricinus communis]
            gi|223535022|gb|EEF36705.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1050

 Score =  402 bits (1034), Expect = e-110
 Identities = 200/270 (74%), Positives = 221/270 (81%), Gaps = 4/270 (1%)
 Frame = +2

Query: 440  KTQQMPARKCASGGP-KDMWCVAREGSLSEVDSALAFLKKNGGNIDARNVFGLTPLHIAT 616
            +  Q  ARK  S G  KD+W V REGSL++VDSALA LKKNGGNI++RN+FGLTPLHIAT
Sbjct: 12   QNMQNQARKGPSNGSHKDLWLVVREGSLADVDSALALLKKNGGNINSRNMFGLTPLHIAT 71

Query: 617  WRNNIPIVRRLIAAGADPDARDGESGWSSLHRALYFGHLAVASILLQSGGSLMLEDSKRR 796
            WRN+IPIVRRL+AAGADPDARDGESGWSSLHRA +FGHLAVAS+LLQS  S+ LEDSK R
Sbjct: 72   WRNHIPIVRRLLAAGADPDARDGESGWSSLHRAFHFGHLAVASVLLQSSASITLEDSKSR 131

Query: 797  IPIDLLSGPVLQVTGSERNA---EVFSWGSGVNYQLGTGNAHIQKLPCRVDALQGLSIKM 967
             PIDLLSGPVLQ  G   ++   EVFSWGSG NYQLGTGNAH+QKLPC+VDAL    IK+
Sbjct: 132  TPIDLLSGPVLQAIGDGHDSVTTEVFSWGSGANYQLGTGNAHLQKLPCKVDALHSSLIKL 191

Query: 968  VSAAKFHSVAVGTRGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTCGLGSXXXXXX 1147
            VSAAKFHS+AV   GEVYTWGFGRGGRLGHP+FDIHSGQAAVITPRQ+T GLGS      
Sbjct: 192  VSAAKFHSIAVSAHGEVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQLTSGLGSRRVKAI 251

Query: 1148 XXXXXXTVITTEGGEVFTWGSNREGQLGYT 1237
                  TV+ TE GEVFTWGSNREGQLGYT
Sbjct: 252  AAAKHHTVLATESGEVFTWGSNREGQLGYT 281



 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 43/119 (36%), Positives = 57/119 (47%)
 Frame = +2

Query: 851  NAEVFSWGSGVNYQLGTGNAHIQKLPCRVDALQGLSIKMVSAAKFHSVAVGTRGEVYTWG 1030
            + EVF+WGS    QLG      Q  P RV +L+   I  V+AA  H+  V   GEV+TWG
Sbjct: 264  SGEVFTWGSNREGQLGY-TVDTQPTPRRVSSLKSRIIA-VAAANKHTAVVSDSGEVFTWG 321

Query: 1031 FGRGGRLGHPEFDIHSGQAAVITPRQVTCGLGSXXXXXXXXXXXXTVITTEGGEVFTWG 1207
              + G+LG+      S  A+  TPR V   L              T++    GEV+TWG
Sbjct: 322  CNKEGQLGYGT----SNSASNYTPRVVEY-LKGKTFKGVAAAKYHTIVLGADGEVYTWG 375


Top