BLASTX nr result

ID: Coptis25_contig00020800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020800
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269231.2| PREDICTED: cytochrome c oxidase assembly pro...   487   e-135
ref|XP_004137225.1| PREDICTED: cytochrome c oxidase assembly pro...   486   e-135
ref|XP_003519646.1| PREDICTED: cytochrome c oxidase assembly pro...   479   e-133
gb|ACU24539.1| unknown [Glycine max]                                  476   e-132
ref|XP_003544552.1| PREDICTED: cytochrome c oxidase assembly pro...   476   e-132

>ref|XP_002269231.2| PREDICTED: cytochrome c oxidase assembly protein COX15-like [Vitis
           vinifera] gi|296089997|emb|CBI39816.3| unnamed protein
           product [Vitis vinifera]
          Length = 452

 Score =  487 bits (1253), Expect = e-135
 Identities = 228/261 (87%), Positives = 245/261 (93%)
 Frame = -3

Query: 784 KEGSKMLITAGSHAQKLVGIWIFGSAAWVFSMVVLGGITRLTRSGLSMTDWKFTGSLPPL 605
           KEG K+L+TAG  AQK+VGIW+FGSAAWVFSMVVLGG+TRLTRSGLSMTDWKFTG+LPPL
Sbjct: 79  KEGLKLLVTAGPRAQKMVGIWLFGSAAWVFSMVVLGGVTRLTRSGLSMTDWKFTGNLPPL 138

Query: 604 SEEQWLVEFDKYKQSPEYKRVNKGMTIEDFKFIYWMEYAHRMWGRGLGIMFALPFSYFLR 425
           S+E WL EF+KYKQSPEYKRVNKGM+IEDFKFIYWMEYAHRMWGR LGIMFALPFSYFL 
Sbjct: 139 SDEDWLAEFEKYKQSPEYKRVNKGMSIEDFKFIYWMEYAHRMWGRALGIMFALPFSYFLH 198

Query: 424 KGYITVRLGVRLSALFALGAGQGLIGWWMVKSGLEEPESEYVQPRVSPYRLAAHLTSAFA 245
           KGYIT+RLG+RLSALF LGAGQGLIGWWMVKSGLEEP SEY QPRVSPYRL AHLTSAF 
Sbjct: 199 KGYITLRLGLRLSALFGLGAGQGLIGWWMVKSGLEEPASEYAQPRVSPYRLTAHLTSAFV 258

Query: 244 IYCGLLWTGLSVVMPEPPAGSMAWVRGAAKLQRLVLPISVLVGITAVSGAFVAGNDAGHA 65
           IYCGLLWT LSVVMPEPPA S+AWVRGAAK++RL LPIS+LVGITAVSGAFVAGNDAGHA
Sbjct: 259 IYCGLLWTALSVVMPEPPAESVAWVRGAAKVKRLALPISILVGITAVSGAFVAGNDAGHA 318

Query: 64  FNTFPKMGDTWIPDDIFSMKP 2
           +NTFPKMGD WIPDDIFSM+P
Sbjct: 319 YNTFPKMGDNWIPDDIFSMEP 339


>ref|XP_004137225.1| PREDICTED: cytochrome c oxidase assembly protein COX15-like
           [Cucumis sativus] gi|449483177|ref|XP_004156514.1|
           PREDICTED: cytochrome c oxidase assembly protein
           COX15-like [Cucumis sativus]
          Length = 449

 Score =  486 bits (1251), Expect = e-135
 Identities = 224/261 (85%), Positives = 247/261 (94%)
 Frame = -3

Query: 784 KEGSKMLITAGSHAQKLVGIWIFGSAAWVFSMVVLGGITRLTRSGLSMTDWKFTGSLPPL 605
           KEG K+L+TAG  AQK+VGIW+FGSAAWVFSMVVLGG+TRLTRSGLSMTDWKFTG+LPPL
Sbjct: 76  KEGLKLLVTAGPRAQKMVGIWLFGSAAWVFSMVVLGGVTRLTRSGLSMTDWKFTGNLPPL 135

Query: 604 SEEQWLVEFDKYKQSPEYKRVNKGMTIEDFKFIYWMEYAHRMWGRGLGIMFALPFSYFLR 425
           ++E+WL EF+KYKQSPEY+RVNKGM+IEDFKFIYWMEYAHRMWGR LGIMFALPFSYFLR
Sbjct: 136 TDEEWLQEFEKYKQSPEYRRVNKGMSIEDFKFIYWMEYAHRMWGRALGIMFALPFSYFLR 195

Query: 424 KGYITVRLGVRLSALFALGAGQGLIGWWMVKSGLEEPESEYVQPRVSPYRLAAHLTSAFA 245
           KGYIT+RLG+RLS LFALGAGQGLIGWWMVKSGLEEP SEYVQPRVSPYRLAAHLTSAF 
Sbjct: 196 KGYITLRLGLRLSTLFALGAGQGLIGWWMVKSGLEEPASEYVQPRVSPYRLAAHLTSAFI 255

Query: 244 IYCGLLWTGLSVVMPEPPAGSMAWVRGAAKLQRLVLPISVLVGITAVSGAFVAGNDAGHA 65
           IYCGL WTGLSVVMPEPP  S+AW RGAAK++R+ LP+S+LVGITA+SGAFVAGNDAGHA
Sbjct: 256 IYCGLFWTGLSVVMPEPPVESVAWARGAAKVRRIALPVSLLVGITAISGAFVAGNDAGHA 315

Query: 64  FNTFPKMGDTWIPDDIFSMKP 2
           +NTFPKMGDTW+PDDIF MKP
Sbjct: 316 YNTFPKMGDTWVPDDIFDMKP 336


>ref|XP_003519646.1| PREDICTED: cytochrome c oxidase assembly protein COX15-like
           [Glycine max]
          Length = 455

 Score =  479 bits (1232), Expect = e-133
 Identities = 223/261 (85%), Positives = 244/261 (93%)
 Frame = -3

Query: 784 KEGSKMLITAGSHAQKLVGIWIFGSAAWVFSMVVLGGITRLTRSGLSMTDWKFTGSLPPL 605
           +EG K+L++ GS AQKLVGIW+FGSAAWVFSMVVLGG+TRLTRSGLSMTDWKFTG+LPP 
Sbjct: 82  EEGLKLLVSGGSRAQKLVGIWLFGSAAWVFSMVVLGGLTRLTRSGLSMTDWKFTGTLPPF 141

Query: 604 SEEQWLVEFDKYKQSPEYKRVNKGMTIEDFKFIYWMEYAHRMWGRGLGIMFALPFSYFLR 425
           S+E+WL EFDKYKQSPE+KRVN+GM IE+FKFIYWMEYAHRMWGR LG+MFALP+SYFL 
Sbjct: 142 SDEEWLQEFDKYKQSPEFKRVNRGMKIEEFKFIYWMEYAHRMWGRALGVMFALPYSYFLH 201

Query: 424 KGYITVRLGVRLSALFALGAGQGLIGWWMVKSGLEEPESEYVQPRVSPYRLAAHLTSAFA 245
           KGYIT+RLG+RLSALFALGAGQGLIGWWMVKSGLEEP SEY QPRVSPYRLAAHLTSAFA
Sbjct: 202 KGYITLRLGLRLSALFALGAGQGLIGWWMVKSGLEEPPSEYSQPRVSPYRLAAHLTSAFA 261

Query: 244 IYCGLLWTGLSVVMPEPPAGSMAWVRGAAKLQRLVLPISVLVGITAVSGAFVAGNDAGHA 65
           IYCGL WT LSVVMPEPPA S+ WVRGAAK++RL LPIS+LVG+TAVSGAFVAGNDAGHA
Sbjct: 262 IYCGLFWTALSVVMPEPPAESLTWVRGAAKVRRLALPISILVGLTAVSGAFVAGNDAGHA 321

Query: 64  FNTFPKMGDTWIPDDIFSMKP 2
           FNTFPKMGDTWIP DIF MKP
Sbjct: 322 FNTFPKMGDTWIPGDIFEMKP 342


>gb|ACU24539.1| unknown [Glycine max]
          Length = 356

 Score =  476 bits (1226), Expect = e-132
 Identities = 222/261 (85%), Positives = 243/261 (93%)
 Frame = -3

Query: 784 KEGSKMLITAGSHAQKLVGIWIFGSAAWVFSMVVLGGITRLTRSGLSMTDWKFTGSLPPL 605
           +EG K+L++ GS AQKLVGIW+FGSAAWVFSMVVLGG+TRLTRSGLSMTDWKFTG+LPP 
Sbjct: 82  EEGLKLLVSGGSRAQKLVGIWLFGSAAWVFSMVVLGGLTRLTRSGLSMTDWKFTGTLPPF 141

Query: 604 SEEQWLVEFDKYKQSPEYKRVNKGMTIEDFKFIYWMEYAHRMWGRGLGIMFALPFSYFLR 425
           S+E+WL EFDKYKQSPE+KRVN+G  IE+FKFIYWMEYAHRMWGR LG+MFALP+SYFL 
Sbjct: 142 SDEEWLQEFDKYKQSPEFKRVNRGTKIEEFKFIYWMEYAHRMWGRALGVMFALPYSYFLH 201

Query: 424 KGYITVRLGVRLSALFALGAGQGLIGWWMVKSGLEEPESEYVQPRVSPYRLAAHLTSAFA 245
           KGYIT+RLG+RLSALFALGAGQGLIGWWMVKSGLEEP SEY QPRVSPYRLAAHLTSAFA
Sbjct: 202 KGYITLRLGLRLSALFALGAGQGLIGWWMVKSGLEEPPSEYSQPRVSPYRLAAHLTSAFA 261

Query: 244 IYCGLLWTGLSVVMPEPPAGSMAWVRGAAKLQRLVLPISVLVGITAVSGAFVAGNDAGHA 65
           IYCGL WT LSVVMPEPPA S+ WVRGAAK++RL LPIS+LVG+TAVSGAFVAGNDAGHA
Sbjct: 262 IYCGLFWTALSVVMPEPPAESLTWVRGAAKVRRLALPISILVGLTAVSGAFVAGNDAGHA 321

Query: 64  FNTFPKMGDTWIPDDIFSMKP 2
           FNTFPKMGDTWIP DIF MKP
Sbjct: 322 FNTFPKMGDTWIPGDIFEMKP 342


>ref|XP_003544552.1| PREDICTED: cytochrome c oxidase assembly protein COX15-like
           [Glycine max]
          Length = 456

 Score =  476 bits (1225), Expect = e-132
 Identities = 223/261 (85%), Positives = 243/261 (93%)
 Frame = -3

Query: 784 KEGSKMLITAGSHAQKLVGIWIFGSAAWVFSMVVLGGITRLTRSGLSMTDWKFTGSLPPL 605
           KEG K+L++ GS AQKLVGIW+FGSAAWVFSMVVLGG+TRLTRSGLSMTDWKFTG+LPP 
Sbjct: 83  KEGLKLLVSGGSRAQKLVGIWLFGSAAWVFSMVVLGGLTRLTRSGLSMTDWKFTGTLPPF 142

Query: 604 SEEQWLVEFDKYKQSPEYKRVNKGMTIEDFKFIYWMEYAHRMWGRGLGIMFALPFSYFLR 425
           S+++WL EFDKYKQSPEYKRVN+GM IE+FKFIYWMEYAHRMWGR LG+MFALP+SYFL 
Sbjct: 143 SDDEWLQEFDKYKQSPEYKRVNRGMKIEEFKFIYWMEYAHRMWGRALGVMFALPYSYFLH 202

Query: 424 KGYITVRLGVRLSALFALGAGQGLIGWWMVKSGLEEPESEYVQPRVSPYRLAAHLTSAFA 245
           K YIT+RLG+RLSALFALGAGQGLIGWWMVKSGLEEP SEY QPRVS YRLAAHLTSAFA
Sbjct: 203 KRYITLRLGLRLSALFALGAGQGLIGWWMVKSGLEEPPSEYSQPRVSSYRLAAHLTSAFA 262

Query: 244 IYCGLLWTGLSVVMPEPPAGSMAWVRGAAKLQRLVLPISVLVGITAVSGAFVAGNDAGHA 65
           IYCGL WT LSVVMPEPPA S+ WVRGAAK++RL LPISVLVG+TAVSGAFVAGNDAGHA
Sbjct: 263 IYCGLFWTALSVVMPEPPAESLTWVRGAAKVRRLALPISVLVGLTAVSGAFVAGNDAGHA 322

Query: 64  FNTFPKMGDTWIPDDIFSMKP 2
           FNTFPKMGDTWIP+DIF MKP
Sbjct: 323 FNTFPKMGDTWIPEDIFEMKP 343


Top