BLASTX nr result

ID: Coptis25_contig00020757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020757
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-a...   130   1e-28
emb|CBI40185.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_004138833.1| PREDICTED: probable U3 small nucleolar RNA-a...   127   1e-27
ref|XP_003556293.1| PREDICTED: probable U3 small nucleolar RNA-a...   123   2e-26
ref|XP_003536295.1| PREDICTED: probable U3 small nucleolar RNA-a...   123   2e-26

>ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-associated protein 7
           [Vitis vinifera]
          Length = 610

 Score =  130 bits (326), Expect = 1e-28
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +2

Query: 2   YPYIYNKDGTELHCLKEHGAVLKLQFLRNHFLLASINKFGQLHYQDVTHGGMVGSYRTGL 181
           YPYIYN+DGTELHCLKEHG+VLKLQFL+NHFLLASINKFGQLHYQDVT G MVG+YRTGL
Sbjct: 253 YPYIYNRDGTELHCLKEHGSVLKLQFLKNHFLLASINKFGQLHYQDVTMGEMVGNYRTGL 312

Query: 182 GRSDVMQV 205
           GR+ VMQV
Sbjct: 313 GRTAVMQV 320


>emb|CBI40185.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  130 bits (326), Expect = 1e-28
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +2

Query: 2   YPYIYNKDGTELHCLKEHGAVLKLQFLRNHFLLASINKFGQLHYQDVTHGGMVGSYRTGL 181
           YPYIYN+DGTELHCLKEHG+VLKLQFL+NHFLLASINKFGQLHYQDVT G MVG+YRTGL
Sbjct: 179 YPYIYNRDGTELHCLKEHGSVLKLQFLKNHFLLASINKFGQLHYQDVTMGEMVGNYRTGL 238

Query: 182 GRSDVMQV 205
           GR+ VMQV
Sbjct: 239 GRTAVMQV 246


>ref|XP_004138833.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           7-like [Cucumis sativus]
           gi|449528879|ref|XP_004171429.1| PREDICTED: probable U3
           small nucleolar RNA-associated protein 7-like [Cucumis
           sativus]
          Length = 536

 Score =  127 bits (318), Expect = 1e-27
 Identities = 57/68 (83%), Positives = 64/68 (94%)
 Frame = +2

Query: 2   YPYIYNKDGTELHCLKEHGAVLKLQFLRNHFLLASINKFGQLHYQDVTHGGMVGSYRTGL 181
           YPYIYN++GTELHCLKEHG+V +LQFL+NHFLL SINKFGQLHYQDVT G MVGS+RTGL
Sbjct: 179 YPYIYNREGTELHCLKEHGSVRRLQFLKNHFLLVSINKFGQLHYQDVTTGSMVGSFRTGL 238

Query: 182 GRSDVMQV 205
           GR+DVMQV
Sbjct: 239 GRTDVMQV 246


>ref|XP_003556293.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           7-like [Glycine max]
          Length = 535

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/68 (82%), Positives = 63/68 (92%)
 Frame = +2

Query: 2   YPYIYNKDGTELHCLKEHGAVLKLQFLRNHFLLASINKFGQLHYQDVTHGGMVGSYRTGL 181
           YPYIYN++GTELHCLKEHG VL+LQFL NHFLLASINKFGQL YQDVT G MVG++RTGL
Sbjct: 179 YPYIYNREGTELHCLKEHGPVLRLQFLENHFLLASINKFGQLRYQDVTMGSMVGNFRTGL 238

Query: 182 GRSDVMQV 205
           GR++VMQV
Sbjct: 239 GRTNVMQV 246


>ref|XP_003536295.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           7-like [Glycine max]
          Length = 535

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/68 (82%), Positives = 63/68 (92%)
 Frame = +2

Query: 2   YPYIYNKDGTELHCLKEHGAVLKLQFLRNHFLLASINKFGQLHYQDVTHGGMVGSYRTGL 181
           YPYIYN++GTELHCLKEHG VL+LQFL NHFLLASINKFGQL YQDVT G MVG++RTGL
Sbjct: 179 YPYIYNREGTELHCLKEHGPVLRLQFLENHFLLASINKFGQLRYQDVTMGSMVGNFRTGL 238

Query: 182 GRSDVMQV 205
           GR++VMQV
Sbjct: 239 GRTNVMQV 246


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