BLASTX nr result
ID: Coptis25_contig00020734
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020734 (1583 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 265 3e-68 ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medi... 260 6e-67 emb|CBI32027.3| unnamed protein product [Vitis vinifera] 260 6e-67 ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein lig... 258 3e-66 ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein lig... 250 8e-64 >ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera] Length = 400 Score = 265 bits (676), Expect = 3e-68 Identities = 144/237 (60%), Positives = 163/237 (68%) Frame = +3 Query: 75 GMRHTLVLLKGNSGDALYGFGSGKRGQLGTSMDMITKSLNLPQVIFGFQQVNIARIIANG 254 GMRH+LVLLKG D +YGFGSGKRGQLG SMD T+S+++PQ G + V I I ANG Sbjct: 160 GMRHSLVLLKG---DQVYGFGSGKRGQLGVSMDN-TRSISVPQATVGLEGVEIISIDANG 215 Query: 255 DQSAALTVDGHLYTWGKGFHGISDACLPLLPSSALKFTKVALGWNHALLLTDCGTVFMLG 434 D SAAL+ +GHLYTWG+GF SD P S+L FT+VALGWNH L+LT G VFMLG Sbjct: 216 DHSAALSANGHLYTWGRGFGSTSDVHCPRCLPSSLCFTQVALGWNHMLVLTGGGEVFMLG 275 Query: 435 GNHHGMLSSPQKLRLKTCSSNQSTGCQGSEDDCRLSILEKVSGLDGIKAVDIAAGAEHSA 614 GN HG+L PQK S G E+ R LEKV GLDG+ V IAAGAEHSA Sbjct: 276 GNRHGVLGDPQKGSQVKHLSVIEVFLHGPEES-REENLEKVQGLDGLNVVQIAAGAEHSA 334 Query: 615 LVTENGKIMTWGWGEHGQLGLGNEEDQIAPQIVSLDAKLLKVQTLFKVYCGSGFTFA 785 LVTEN I TWGWGEHGQLGLGN DQI+PQ V L +L T+ KVYCGSGFTFA Sbjct: 335 LVTENRVIKTWGWGEHGQLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFA 391 Score = 65.9 bits (159), Expect = 3e-08 Identities = 62/224 (27%), Positives = 94/224 (41%), Gaps = 23/224 (10%) Frame = +3 Query: 123 LYGFGSGKRGQLGTSM---DMITKSLNLPQVIFGFQQVN-IARIIANGDQSAALTVDGHL 290 ++ +G+G GQLGT+ + + + L+LP+ F I+ + G ALT DG + Sbjct: 14 IWSWGAGTDGQLGTTRLEDEHLPQLLDLPR----FSSAGPISLLACGGAHVLALTTDGKV 69 Query: 291 YTWGKGFHGI---SDACLPLLPS-----SALKFTKVALGWNHALLLTDCGTVFMLGGNHH 446 TWG+G G D L P + T V+ GW+H+ ++D G +F G Sbjct: 70 VTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSF 129 Query: 447 GMLSSPQKLRLKTCSSNQSTGCQGSEDDCRLSILEKVSGLDGIKAVDIAAGAEHSALVTE 626 G L C S+ S KVS D IA G HS ++ + Sbjct: 130 GQLGHGD------CKSHCSP--------------VKVSYFDSKHVDQIACGMRHSLVLLK 169 Query: 627 NGKIMTWGWGEHGQLG--LGNEEDQIAPQ---------IVSLDA 725 ++ +G G+ GQLG + N PQ I+S+DA Sbjct: 170 GDQVYGFGSGKRGQLGVSMDNTRSISVPQATVGLEGVEIISIDA 213 >ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medicago truncatula] gi|355514908|gb|AES96531.1| RCC1 and BTB domain-containing protein [Medicago truncatula] Length = 615 Score = 260 bits (665), Expect = 6e-67 Identities = 140/237 (59%), Positives = 164/237 (69%) Frame = +3 Query: 75 GMRHTLVLLKGNSGDALYGFGSGKRGQLGTSMDMITKSLNLPQVIFGFQQVNIARIIANG 254 GMRH+LVLLKG + +YGFGSGKRGQLG S D I KS+NLP+VI GF+ I I ANG Sbjct: 388 GMRHSLVLLKGCLSNQVYGFGSGKRGQLGVSKDKI-KSINLPKVISGFEDEEIVGISANG 446 Query: 255 DQSAALTVDGHLYTWGKGFHGISDACLPLLPSSALKFTKVALGWNHALLLTDCGTVFMLG 434 D SAAL+VDGHLYTWG+GF G D+ LP +S KFTKV LGWNHAL +T G V+MLG Sbjct: 447 DHSAALSVDGHLYTWGRGFKGYEDSHLPQCLNSTSKFTKVTLGWNHALAMTGEGKVYMLG 506 Query: 435 GNHHGMLSSPQKLRLKTCSSNQSTGCQGSEDDCRLSILEKVSGLDGIKAVDIAAGAEHSA 614 GNH G+LS R S D R + LEK GLDG K DIA GAEHS Sbjct: 507 GNHLGVLSDLHNARPAK-----------SLFDSREANLEKAPGLDGTKITDIATGAEHSV 555 Query: 615 LVTENGKIMTWGWGEHGQLGLGNEEDQIAPQIVSLDAKLLKVQTLFKVYCGSGFTFA 785 LVTENG+I TWGWGEHGQLGLG++ D+I+P V+L L + ++ +VYCGSGFTFA Sbjct: 556 LVTENGEIKTWGWGEHGQLGLGDDGDRISPVTVNLGYDLNEAASI-RVYCGSGFTFA 611 >emb|CBI32027.3| unnamed protein product [Vitis vinifera] Length = 405 Score = 260 bits (665), Expect = 6e-67 Identities = 141/240 (58%), Positives = 165/240 (68%), Gaps = 3/240 (1%) Frame = +3 Query: 75 GMRHTLVLLKGN--SGDALYGFGSGKRGQLGTSMDMITKSLNLPQVIFGFQQVNIARIIA 248 GMRH+LVLLKG SGD +YGFGSGKRGQLG SMD T+S+++PQ G + V I I A Sbjct: 168 GMRHSLVLLKGTGLSGDQVYGFGSGKRGQLGVSMDN-TRSISVPQATVGLEGVEIISIDA 226 Query: 249 NGDQSAALTVDGHLYTWGKGFHGISDACLPLLPSSALKFTKVALGWNHALLLTDCGTVFM 428 NGD SAAL+ +GHLYTWG+GF SD P S+L FT+VALGWNH L+LT G VFM Sbjct: 227 NGDHSAALSANGHLYTWGRGFGSTSDVHCPRCLPSSLCFTQVALGWNHMLVLTGGGEVFM 286 Query: 429 LGGNHHGMLSSPQKLRLKTCSSNQSTGCQGSEDDCRLSILEKVSGLDGIKAVDIAAGAEH 608 LGGN HG+L PQK + + ++ R LEKV GLDG+ V IAAGAEH Sbjct: 287 LGGNRHGVLGDPQK----------GSQVKHLSEESREENLEKVQGLDGLNVVQIAAGAEH 336 Query: 609 SALVTENGKIM-TWGWGEHGQLGLGNEEDQIAPQIVSLDAKLLKVQTLFKVYCGSGFTFA 785 SALVT N ++ TWGWGEHGQLGLGN DQI+PQ V L +L T+ KVYCGSGFTFA Sbjct: 337 SALVTGNILVIKTWGWGEHGQLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFA 396 Score = 69.7 bits (169), Expect = 2e-09 Identities = 63/229 (27%), Positives = 97/229 (42%), Gaps = 51/229 (22%) Frame = +3 Query: 123 LYGFGSGKRGQLGTSM---DMITKSLNLPQVIFGFQQVN-IARIIANGDQSAALTVDGHL 290 ++ +G+G GQLGT+ + + + L+LP+ F I+ + G ALT DG + Sbjct: 22 IWSWGAGTDGQLGTTRLEDEHLPQLLDLPR----FSSAGPISLLACGGAHVLALTTDGKV 77 Query: 291 YTWGKGFH---GISDACLPLLPS-----SALKFTKVALGWNHALLLTDCGTVFMLGGNHH 446 TWG+G G D L P + T V+ GW+H+ ++D G +F G Sbjct: 78 VTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSF 137 Query: 447 GMLS--------SPQKLRL--------KTCSSNQS------TGCQG-------------- 518 G L SP K+ C S TG G Sbjct: 138 GQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGTGLSGDQVYGFGSGKRGQL 197 Query: 519 --SEDDCR-LSILEKVSGLDGIKAVDIAAGAEHSALVTENGKIMTWGWG 656 S D+ R +S+ + GL+G++ + I A +HSA ++ NG + TWG G Sbjct: 198 GVSMDNTRSISVPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRG 246 >ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine max] Length = 388 Score = 258 bits (659), Expect = 3e-66 Identities = 137/237 (57%), Positives = 167/237 (70%) Frame = +3 Query: 75 GMRHTLVLLKGNSGDALYGFGSGKRGQLGTSMDMITKSLNLPQVIFGFQQVNIARIIANG 254 GMRH+LVLLKGN +YGFGSGKRGQLG S D + KS+N+P+V+ GF+ V I ANG Sbjct: 164 GMRHSLVLLKGNQ---VYGFGSGKRGQLGVSNDRV-KSVNVPKVVSGFEGVEIVGTAANG 219 Query: 255 DQSAALTVDGHLYTWGKGFHGISDACLPLLPSSALKFTKVALGWNHALLLTDCGTVFMLG 434 D SAA++VDGH+YTWG+GF G DA +P +S+L FTKVALGWNHAL ++ G V+MLG Sbjct: 220 DHSAAVSVDGHVYTWGRGFKGFEDAHVPQCLNSSLNFTKVALGWNHALAMSGEGEVYMLG 279 Query: 435 GNHHGMLSSPQKLRLKTCSSNQSTGCQGSEDDCRLSILEKVSGLDGIKAVDIAAGAEHSA 614 GNH G+LS Q + G D R LEKV GLDG K DIAAGAEHS Sbjct: 280 GNHLGVLSDLQNI-----------GPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSV 328 Query: 615 LVTENGKIMTWGWGEHGQLGLGNEEDQIAPQIVSLDAKLLKVQTLFKVYCGSGFTFA 785 +VTE+G+I TWGWGEHGQLGLG+ DQ +P VSLD L + ++ +V+CGSGFTFA Sbjct: 329 IVTEHGEIKTWGWGEHGQLGLGDTRDQTSPVTVSLDYDLNEAASI-RVFCGSGFTFA 384 Score = 72.8 bits (177), Expect = 2e-10 Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 11/216 (5%) Frame = +3 Query: 102 KGNSGDALYGFGSGKRGQLGTSMDMITKSLNLPQVIFGFQQVNIARIIANGDQSAALTVD 281 + S ++ +G+G GQLGT I + + PQ++ F +I+ + G ALT Sbjct: 13 RDESEQRVWSWGAGTEGQLGTK---ILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSA 69 Query: 282 GHLYTWGKGFHG-------ISDACLPLLPSSALKF--TKVALGWNHALLLTDCGTVFMLG 434 G +WG+G G +S+ P +S + T V+ GW+H+ ++D G VF G Sbjct: 70 GKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCG 129 Query: 435 GNHHGMLSSPQKLRLKTCSSNQSTGCQGSEDDCRLSILEKVSGLDGIKAVDIAAGAEHSA 614 G L G D+ KVS + +A G HS Sbjct: 130 DGSFGQL--------------------GHGDNASHCSPVKVSCFVDLHVAQVACGMRHSL 169 Query: 615 LVTENGKIMTWGWGEHGQLGLGNE--EDQIAPQIVS 716 ++ + ++ +G G+ GQLG+ N+ + P++VS Sbjct: 170 VLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVS 205 >ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine max] Length = 388 Score = 250 bits (638), Expect = 8e-64 Identities = 135/237 (56%), Positives = 165/237 (69%) Frame = +3 Query: 75 GMRHTLVLLKGNSGDALYGFGSGKRGQLGTSMDMITKSLNLPQVIFGFQQVNIARIIANG 254 GMRH+LVLLKGN +YGFGSGKRGQLG S D + KS+N+P+V+ GF+ V IA I ANG Sbjct: 164 GMRHSLVLLKGNQ---VYGFGSGKRGQLGVSNDRV-KSVNVPKVVSGFEGVEIAGIAANG 219 Query: 255 DQSAALTVDGHLYTWGKGFHGISDACLPLLPSSALKFTKVALGWNHALLLTDCGTVFMLG 434 D SAA++VDGH+YTWG+GF G DA +P +S+L FTKVALGWNHAL ++ G V MLG Sbjct: 220 DHSAAVSVDGHVYTWGRGFKGFEDARVPQCLNSSLNFTKVALGWNHALAMSGEGEVCMLG 279 Query: 435 GNHHGMLSSPQKLRLKTCSSNQSTGCQGSEDDCRLSILEKVSGLDGIKAVDIAAGAEHSA 614 GNH G+LS Q + + R LEKV GLDG K DIA GAEHS Sbjct: 280 GNHLGVLSDLQNISPAKHLPH-----------LREVNLEKVPGLDGTKITDIATGAEHSV 328 Query: 615 LVTENGKIMTWGWGEHGQLGLGNEEDQIAPQIVSLDAKLLKVQTLFKVYCGSGFTFA 785 +VTE+G+I TWGWGEHGQLGLG+ D+I+P VSL L + ++ V+CGSGFTFA Sbjct: 329 IVTEHGEIKTWGWGEHGQLGLGDTRDRISPVTVSLGYDLNEAASVI-VFCGSGFTFA 384 Score = 67.0 bits (162), Expect = 1e-08 Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 11/216 (5%) Frame = +3 Query: 102 KGNSGDALYGFGSGKRGQLGTSMDMITKSLNLPQVIFGFQQVNIARIIANGDQSAALTVD 281 K S ++ +G+G GQLGT I + + PQ++ +I+ + G ALT Sbjct: 13 KDESEQRVWSWGAGTEGQLGTK---ILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSA 69 Query: 282 GHLYTWGKGFHG-------ISDACLPLLPSSALKF--TKVALGWNHALLLTDCGTVFMLG 434 G + +WG+G G +S++ P +S + T V+ GW H+ ++D G VF G Sbjct: 70 GKVLSWGRGNSGQLGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCG 129 Query: 435 GNHHGMLSSPQKLRLKTCSSNQSTGCQGSEDDCRLSILEKVSGLDGIKAVDIAAGAEHSA 614 G L G D KVS +A G HS Sbjct: 130 DGSFGQL--------------------GHGDHASHCSPVKVSCFVDQHVEQVACGMRHSL 169 Query: 615 LVTENGKIMTWGWGEHGQLGLGNE--EDQIAPQIVS 716 ++ + ++ +G G+ GQLG+ N+ + P++VS Sbjct: 170 VLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVS 205