BLASTX nr result

ID: Coptis25_contig00020733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020733
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31514.3| unnamed protein product [Vitis vinifera]              145   4e-33
ref|XP_002278274.1| PREDICTED: Golgi to ER traffic protein 4 hom...   145   4e-33
ref|XP_002523898.1| conserved hypothetical protein [Ricinus comm...   143   2e-32
gb|AFK33559.1| unknown [Medicago truncatula]                          137   7e-31
gb|ACJ85255.1| unknown [Medicago truncatula]                          137   7e-31

>emb|CBI31514.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score =  145 bits (365), Expect = 4e-33
 Identities = 71/96 (73%), Positives = 86/96 (89%)
 Frame = +2

Query: 2   VAIARAILLYLSLMNLRDANCLLDELRKQVGSMQLELPRSDLIQFVIYLLQTLERDALPL 181
           +AIARA+L+YLSL NLRDAN L+DE++KQV S +L+ P SDL +F+ YLL TL+RDALPL
Sbjct: 575 LAIARAVLMYLSLGNLRDANYLMDEVKKQVESKELDYPESDLTEFIDYLLLTLQRDALPL 634

Query: 182 FRMLRQNYKSSIDREPAFNELLDEISEKFYGVQRKN 289
           F MLRQ+YKSSIDREPAFNELLDEI+EKFYGV+R+N
Sbjct: 635 FNMLRQSYKSSIDREPAFNELLDEIAEKFYGVRRRN 670


>ref|XP_002278274.1| PREDICTED: Golgi to ER traffic protein 4 homolog [Vitis vinifera]
          Length = 322

 Score =  145 bits (365), Expect = 4e-33
 Identities = 71/96 (73%), Positives = 86/96 (89%)
 Frame = +2

Query: 2   VAIARAILLYLSLMNLRDANCLLDELRKQVGSMQLELPRSDLIQFVIYLLQTLERDALPL 181
           +AIARA+L+YLSL NLRDAN L+DE++KQV S +L+ P SDL +F+ YLL TL+RDALPL
Sbjct: 213 LAIARAVLMYLSLGNLRDANYLMDEVKKQVESKELDYPESDLTEFIDYLLLTLQRDALPL 272

Query: 182 FRMLRQNYKSSIDREPAFNELLDEISEKFYGVQRKN 289
           F MLRQ+YKSSIDREPAFNELLDEI+EKFYGV+R+N
Sbjct: 273 FNMLRQSYKSSIDREPAFNELLDEIAEKFYGVRRRN 308


>ref|XP_002523898.1| conserved hypothetical protein [Ricinus communis]
           gi|223536828|gb|EEF38467.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 324

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/96 (72%), Positives = 84/96 (87%)
 Frame = +2

Query: 2   VAIARAILLYLSLMNLRDANCLLDELRKQVGSMQLELPRSDLIQFVIYLLQTLERDALPL 181
           +AIARAILLYL+L NLRDAN L+DE++KQV S +L+ P+SDLIQF+ YLL TL+RDA PL
Sbjct: 216 LAIARAILLYLALGNLRDANRLMDEVKKQVESKKLDFPKSDLIQFITYLLPTLQRDAFPL 275

Query: 182 FRMLRQNYKSSIDREPAFNELLDEISEKFYGVQRKN 289
           F MLR +YKSSIDREP FNELLDEI+EK YG+QR+N
Sbjct: 276 FNMLRASYKSSIDREPVFNELLDEIAEKLYGIQRRN 311


>gb|AFK33559.1| unknown [Medicago truncatula]
          Length = 154

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/96 (67%), Positives = 84/96 (87%)
 Frame = +2

Query: 2   VAIARAILLYLSLMNLRDANCLLDELRKQVGSMQLELPRSDLIQFVIYLLQTLERDALPL 181
           +AIARA+L YLSL NL+DAN L+DE++KQ  S ++E P++DL+QF+ +LLQT+ERDA PL
Sbjct: 49  LAIARAVLRYLSLGNLKDANILVDEIKKQTESTEVEFPKTDLMQFLNFLLQTMERDAFPL 108

Query: 182 FRMLRQNYKSSIDREPAFNELLDEISEKFYGVQRKN 289
           F MLR NYK SI+REP+FNELLDEI++KFYGVQR+N
Sbjct: 109 FNMLRANYKPSIEREPSFNELLDEIAQKFYGVQRRN 144


>gb|ACJ85255.1| unknown [Medicago truncatula]
          Length = 221

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/96 (67%), Positives = 84/96 (87%)
 Frame = +2

Query: 2   VAIARAILLYLSLMNLRDANCLLDELRKQVGSMQLELPRSDLIQFVIYLLQTLERDALPL 181
           +AIARA+L YLSL NL+DAN L+DE++KQ  S ++E P++DL+QF+ +LLQT+ERDA PL
Sbjct: 111 LAIARAVLRYLSLGNLKDANILVDEIKKQTESTEVEFPKTDLMQFLNFLLQTMERDAFPL 170

Query: 182 FRMLRQNYKSSIDREPAFNELLDEISEKFYGVQRKN 289
           F MLR NYK SI+REP+FNELLDEI++KFYGVQR+N
Sbjct: 171 FNMLRANYKPSIEREPSFNELLDEIAQKFYGVQRRN 206


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