BLASTX nr result

ID: Coptis25_contig00020728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020728
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524510.1| kinase, putative [Ricinus communis] gi|22353...    76   3e-12
ref|XP_002316847.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
emb|CBI20151.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002283464.1| PREDICTED: probable LRR receptor-like serine...    66   3e-09
ref|XP_002283477.1| PREDICTED: probable LRR receptor-like serine...    65   4e-09

>ref|XP_002524510.1| kinase, putative [Ricinus communis] gi|223536184|gb|EEF37837.1|
           kinase, putative [Ricinus communis]
          Length = 897

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/62 (58%), Positives = 44/62 (70%)
 Frame = -1

Query: 203 SFNRLTGDIPETLARLTKLQLMFLTNNTLTGQISPWISRRSGTRDNFDISYNNFTGTFES 24
           SFNRLTG IP++L  L  +  MFLTNN+LTG+I  WI R   T  N+D+SYNNFTGT  +
Sbjct: 316 SFNRLTGSIPDSLQSLEAIDYMFLTNNSLTGEIPSWILR---TSKNYDLSYNNFTGTVST 372

Query: 23  DC 18
            C
Sbjct: 373 SC 374


>ref|XP_002316847.1| predicted protein [Populus trichocarpa] gi|222859912|gb|EEE97459.1|
           predicted protein [Populus trichocarpa]
          Length = 1015

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/62 (50%), Positives = 42/62 (67%)
 Frame = -1

Query: 203 SFNRLTGDIPETLARLTKLQLMFLTNNTLTGQISPWISRRSGTRDNFDISYNNFTGTFES 24
           SFN+ TG IP +L  L KL+ MFL NN LTG++  WI     +++  D+SYNNFTG+ +S
Sbjct: 321 SFNKFTGQIPVSLESLAKLRFMFLNNNLLTGEVPGWI---LNSKNELDLSYNNFTGSTQS 377

Query: 23  DC 18
            C
Sbjct: 378 SC 379


>emb|CBI20151.3| unnamed protein product [Vitis vinifera]
          Length = 1063

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
 Frame = -1

Query: 203 SFNRLTGDIPETLAR----LTKLQLMFLTNNTLTGQISPWISRRSGTRDNFDISYNNFTG 36
           SFNRL G IPE+         KL  MFLTNN+LTG++  WIS  S T++N D+SYNNFTG
Sbjct: 350 SFNRLNGKIPESFKEEKEDRAKLNFMFLTNNSLTGEVPNWIS--SDTKNNIDLSYNNFTG 407


>ref|XP_002283464.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53440-like [Vitis vinifera]
          Length = 1018

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
 Frame = -1

Query: 203 SFNRLTGDIPETLAR----LTKLQLMFLTNNTLTGQISPWISRRSGTRDNFDISYNNFTG 36
           SFNRL G IPE+         KL  MFLTNN+LTG++  WIS  S T++N D+SYNNFTG
Sbjct: 305 SFNRLNGKIPESFKEEKEDRAKLNFMFLTNNSLTGEVPNWIS--SDTKNNIDLSYNNFTG 362


>ref|XP_002283477.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53440-like [Vitis vinifera]
          Length = 1020

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
 Frame = -1

Query: 203 SFNRLTGDIPETLAR----LTKLQLMFLTNNTLTGQISPWISRRSGTRDNFDISYNNFTG 36
           SFNRL+G IP++  +     TKL  MFLTNN+LTG++  WI  RS T +  D+SYNNFTG
Sbjct: 305 SFNRLSGTIPKSFKQEKKVKTKLDFMFLTNNSLTGEVPSWI--RSDTENKIDLSYNNFTG 362

Query: 35  TFESDC 18
                C
Sbjct: 363 PRLDSC 368


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