BLASTX nr result

ID: Coptis25_contig00020721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020721
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC66181.1| putative auxin binding protein 1 beta1 [Matricar...   177   8e-43
emb|CBI32317.3| unnamed protein product [Vitis vinifera]              177   1e-42
ref|XP_002273447.1| PREDICTED: auxin-binding protein T85 [Vitis ...   177   1e-42
gb|AAB47752.1| auxin binding protein [Malus x domestica] gi|3339...   176   1e-42
dbj|BAC66183.1| putative auxin binding protein 1 beta [Chamaemel...   176   2e-42

>dbj|BAC66181.1| putative auxin binding protein 1 beta1 [Matricaria recutita]
          Length = 189

 Score =  177 bits (449), Expect = 8e-43
 Identities = 81/107 (75%), Positives = 95/107 (88%)
 Frame = +2

Query: 38  IVAAESSICATNGIPIVRNISELPQSDYGREGLSHMTVAGSLLHGMKEVEVWLQTFAPGS 217
           I A  SS C+TNGIP+VR+IS LPQ +YGR GLSHMTVAGSL+HG+KEVE+WLQTFAPG+
Sbjct: 17  ITAVTSSQCSTNGIPLVRDISTLPQDNYGRPGLSHMTVAGSLMHGLKEVEIWLQTFAPGT 76

Query: 218 QTPIHRHSCEEVFIVLKGSGTLFLASSSHGPSPGKPQEFPIFSNSTF 358
            TPIHRHSCEEVF+VLKGSGTL+L+ +SH  +PGKP+EF IFSNSTF
Sbjct: 77  HTPIHRHSCEEVFVVLKGSGTLYLSPNSHAKTPGKPEEFQIFSNSTF 123


>emb|CBI32317.3| unnamed protein product [Vitis vinifera]
          Length = 207

 Score =  177 bits (448), Expect = 1e-42
 Identities = 82/104 (78%), Positives = 94/104 (90%)
 Frame = +2

Query: 47  AESSICATNGIPIVRNISELPQSDYGREGLSHMTVAGSLLHGMKEVEVWLQTFAPGSQTP 226
           AE+S C+  G+P+VR I+ELPQ +YGREGLSH+TVAGSL+HGMKEVEVWLQTF+PGS TP
Sbjct: 19  AEASQCSAIGLPLVRKINELPQDNYGREGLSHITVAGSLMHGMKEVEVWLQTFSPGSHTP 78

Query: 227 IHRHSCEEVFIVLKGSGTLFLASSSHGPSPGKPQEFPIFSNSTF 358
           IHRHSCEEVF+VLKGSGTL+LASSSH   PGKPQE+PI SNSTF
Sbjct: 79  IHRHSCEEVFVVLKGSGTLYLASSSHEKHPGKPQEYPIVSNSTF 122


>ref|XP_002273447.1| PREDICTED: auxin-binding protein T85 [Vitis vinifera]
          Length = 188

 Score =  177 bits (448), Expect = 1e-42
 Identities = 82/104 (78%), Positives = 94/104 (90%)
 Frame = +2

Query: 47  AESSICATNGIPIVRNISELPQSDYGREGLSHMTVAGSLLHGMKEVEVWLQTFAPGSQTP 226
           AE+S C+  G+P+VR I+ELPQ +YGREGLSH+TVAGSL+HGMKEVEVWLQTF+PGS TP
Sbjct: 19  AEASQCSAIGLPLVRKINELPQDNYGREGLSHITVAGSLMHGMKEVEVWLQTFSPGSHTP 78

Query: 227 IHRHSCEEVFIVLKGSGTLFLASSSHGPSPGKPQEFPIFSNSTF 358
           IHRHSCEEVF+VLKGSGTL+LASSSH   PGKPQE+PI SNSTF
Sbjct: 79  IHRHSCEEVFVVLKGSGTLYLASSSHEKHPGKPQEYPIVSNSTF 122


>gb|AAB47752.1| auxin binding protein [Malus x domestica]
           gi|333973929|gb|AEG42213.1| auxin binding protein [Malus
           x domestica]
          Length = 193

 Score =  176 bits (447), Expect = 1e-42
 Identities = 83/104 (79%), Positives = 93/104 (89%)
 Frame = +2

Query: 47  AESSICATNGIPIVRNISELPQSDYGREGLSHMTVAGSLLHGMKEVEVWLQTFAPGSQTP 226
           +E+S C+  G+PIVRNISELPQ +YGR GL+H TVAGSLLHG+KEVEVWLQTFAPGS TP
Sbjct: 22  SEASKCSLKGLPIVRNISELPQDNYGRGGLAHTTVAGSLLHGLKEVEVWLQTFAPGSGTP 81

Query: 227 IHRHSCEEVFIVLKGSGTLFLASSSHGPSPGKPQEFPIFSNSTF 358
           IHRHSCEEVF+VLKGSGTL+LA SSHG  PGKPQEF IF+NSTF
Sbjct: 82  IHRHSCEEVFVVLKGSGTLYLAPSSHGKFPGKPQEFSIFANSTF 125


>dbj|BAC66183.1| putative auxin binding protein 1 beta [Chamaemelum nobile]
          Length = 170

 Score =  176 bits (446), Expect = 2e-42
 Identities = 80/102 (78%), Positives = 94/102 (92%)
 Frame = +2

Query: 53  SSICATNGIPIVRNISELPQSDYGREGLSHMTVAGSLLHGMKEVEVWLQTFAPGSQTPIH 232
           SS C+TNGIP+VR+IS LPQ +YGR GLSH+TVAGSL+HG+KEVE+WLQTFAPG+ TPIH
Sbjct: 3   SSQCSTNGIPLVRDISTLPQDNYGRPGLSHITVAGSLMHGLKEVEIWLQTFAPGTHTPIH 62

Query: 233 RHSCEEVFIVLKGSGTLFLASSSHGPSPGKPQEFPIFSNSTF 358
           RHSCEEVF+VLKGSGTL+L+S+SH  SPGKP+EF IFSNSTF
Sbjct: 63  RHSCEEVFVVLKGSGTLYLSSNSHAKSPGKPEEFQIFSNSTF 104


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