BLASTX nr result
ID: Coptis25_contig00020717
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020717 (397 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004134172.1| PREDICTED: putative TrmH family tRNA/rRNA me... 227 7e-58 gb|AFI57511.1| NEP-TC [Solanum betaceum] 226 2e-57 ref|XP_002516828.1| rRNA methylase, putative [Ricinus communis] ... 219 2e-55 ref|XP_002312722.1| predicted protein [Populus trichocarpa] gi|1... 218 5e-55 ref|XP_002278797.1| PREDICTED: uncharacterized protein LOC100252... 217 7e-55 >ref|XP_004134172.1| PREDICTED: putative TrmH family tRNA/rRNA methyltransferase-like [Cucumis sativus] gi|449495429|ref|XP_004159839.1| PREDICTED: putative TrmH family tRNA/rRNA methyltransferase-like [Cucumis sativus] Length = 218 Score = 227 bits (579), Expect = 7e-58 Identities = 110/123 (89%), Positives = 118/123 (95%) Frame = +3 Query: 24 IESTVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRLRHFHSLN 203 IES VVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLR RHFHSL Sbjct: 3 IESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRFRHFHSLL 62 Query: 204 EAQTYLKEKNFDICGVEITNDSLAVNQHPFRRSTAFLLGNEGTGLSAKECEICDFFVYIP 383 +AQT+LKEK+ DICGVEIT++++AVNQHPF+RSTAFLLGNEGTGLSAKEC ICDFFVYIP Sbjct: 63 DAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFVYIP 122 Query: 384 QYG 392 QYG Sbjct: 123 QYG 125 >gb|AFI57511.1| NEP-TC [Solanum betaceum] Length = 221 Score = 226 bits (575), Expect = 2e-57 Identities = 104/129 (80%), Positives = 121/129 (93%) Frame = +3 Query: 9 ERMEKIESTVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRLRH 188 E +K+ES V+VHNIAKRHNVGT+ARSATAFGVSE+ILVGRRDFNAFGSHGSTSH+R RH Sbjct: 2 ENEKKLESFVLVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVRFRH 61 Query: 189 FHSLNEAQTYLKEKNFDICGVEITNDSLAVNQHPFRRSTAFLLGNEGTGLSAKECEICDF 368 FHSL +A+T+LKE++ DICGVEIT +++A+N+HPF+RSTAFLLGNEGTGLS KECEICDF Sbjct: 62 FHSLADAKTFLKERDCDICGVEITENAVAINEHPFKRSTAFLLGNEGTGLSTKECEICDF 121 Query: 369 FVYIPQYGC 395 FVYIPQYGC Sbjct: 122 FVYIPQYGC 130 >ref|XP_002516828.1| rRNA methylase, putative [Ricinus communis] gi|223543916|gb|EEF45442.1| rRNA methylase, putative [Ricinus communis] Length = 216 Score = 219 bits (557), Expect = 2e-55 Identities = 105/123 (85%), Positives = 114/123 (92%) Frame = +3 Query: 24 IESTVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRLRHFHSLN 203 IES V+VHNIAKRHNVGT+ARSATAFGV+ELILVGRRDFNAFGSHGSTSHLR RHFHSL Sbjct: 3 IESYVLVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSTSHLRFRHFHSLL 62 Query: 204 EAQTYLKEKNFDICGVEITNDSLAVNQHPFRRSTAFLLGNEGTGLSAKECEICDFFVYIP 383 A+ YLKEK DICGVEIT+ +L VN+HPF++STAFLLGNEGTGLSAKECEICDFFVYIP Sbjct: 63 NARDYLKEKECDICGVEITDGALPVNEHPFKKSTAFLLGNEGTGLSAKECEICDFFVYIP 122 Query: 384 QYG 392 QYG Sbjct: 123 QYG 125 >ref|XP_002312722.1| predicted protein [Populus trichocarpa] gi|118483281|gb|ABK93543.1| unknown [Populus trichocarpa] gi|222852542|gb|EEE90089.1| predicted protein [Populus trichocarpa] Length = 216 Score = 218 bits (554), Expect = 5e-55 Identities = 102/123 (82%), Positives = 113/123 (91%) Frame = +3 Query: 27 ESTVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRLRHFHSLNE 206 ES VVVHNIAKRHNVGT+ARSATAFGV ELILVGRRDFN+FGSHGSTSHL RHFHSL++ Sbjct: 4 ESYVVVHNIAKRHNVGTLARSATAFGVKELILVGRRDFNSFGSHGSTSHLPFRHFHSLSD 63 Query: 207 AQTYLKEKNFDICGVEITNDSLAVNQHPFRRSTAFLLGNEGTGLSAKECEICDFFVYIPQ 386 A+ +LKEK+ DICGVEIT+ + VN+HPF+RSTAFLLGNEGTGLS KECEICDFFVYIPQ Sbjct: 64 ARNFLKEKDCDICGVEITDSAFPVNEHPFKRSTAFLLGNEGTGLSTKECEICDFFVYIPQ 123 Query: 387 YGC 395 YGC Sbjct: 124 YGC 126 >ref|XP_002278797.1| PREDICTED: uncharacterized protein LOC100252797 [Vitis vinifera] gi|147777374|emb|CAN73835.1| hypothetical protein VITISV_043470 [Vitis vinifera] gi|297736948|emb|CBI26149.3| unnamed protein product [Vitis vinifera] Length = 217 Score = 217 bits (553), Expect = 7e-55 Identities = 103/123 (83%), Positives = 116/123 (94%) Frame = +3 Query: 24 IESTVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRLRHFHSLN 203 +ES VVVHNIAKRHNVGT+ARSA+A GVSELILVGRRDFN+FGSHGSTSHLR RHFHSL Sbjct: 3 VESYVVVHNIAKRHNVGTLARSASALGVSELILVGRRDFNSFGSHGSTSHLRFRHFHSLL 62 Query: 204 EAQTYLKEKNFDICGVEITNDSLAVNQHPFRRSTAFLLGNEGTGLSAKECEICDFFVYIP 383 +A+ +LKEK+ DICGVEIT++++AVNQHPF+RSTAFLLGNEGTGLS KECEICDFFVYIP Sbjct: 63 DARHFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSVKECEICDFFVYIP 122 Query: 384 QYG 392 QYG Sbjct: 123 QYG 125