BLASTX nr result

ID: Coptis25_contig00020711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020711
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526391.1| nucleic acid binding protein, putative [Rici...   276   3e-72
ref|XP_002280477.2| PREDICTED: CWF19-like protein 2-like [Vitis ...   275   6e-72
ref|XP_002319799.1| predicted protein [Populus trichocarpa] gi|2...   273   4e-71
gb|AAG50922.1|AC069159_23 unknown protein [Arabidopsis thaliana]      263   4e-68
ref|XP_002891949.1| hypothetical protein ARALYDRAFT_892793 [Arab...   263   4e-68

>ref|XP_002526391.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223534253|gb|EEF35967.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 726

 Score =  276 bits (707), Expect = 3e-72
 Identities = 129/164 (78%), Positives = 149/164 (90%), Gaps = 1/164 (0%)
 Frame = -1

Query: 767  RNFKKCLIKMFTKQKKEVVFLETVIGLSQQHRHCLVECVPLPRDLASEAPLYFKKAIDEA 588
            RNFKKCLI MF KQ+K++VFLETV+GL+QQ RHCL+ECVPLPR++A +APLYFKKAIDEA
Sbjct: 563  RNFKKCLIMMFAKQEKDLVFLETVMGLAQQRRHCLIECVPLPREIAKQAPLYFKKAIDEA 622

Query: 587  EEEWSQHNAKKLIDTSVKGLHGSIPKDFPYFHVEFGLHKGFVHVIDDENQFKSSFGLNVI 408
            E+EWSQHNAKKLIDTS KGL GSIPKDFPYFHVEFGL+KGFVHVIDDE QFKSS GLNVI
Sbjct: 623  EDEWSQHNAKKLIDTSQKGLRGSIPKDFPYFHVEFGLNKGFVHVIDDEQQFKSSLGLNVI 682

Query: 407  RGMLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 279
            RGML+LP+ED  R R+HES + Q++ V +FA+EWEPFDWTK+LD
Sbjct: 683  RGMLRLPEEDMYRRRRHESVDLQKQAVANFAREWEPFDWTKQLD 726


>ref|XP_002280477.2| PREDICTED: CWF19-like protein 2-like [Vitis vinifera]
            gi|297737179|emb|CBI26380.3| unnamed protein product
            [Vitis vinifera]
          Length = 810

 Score =  275 bits (704), Expect = 6e-72
 Identities = 128/164 (78%), Positives = 151/164 (92%), Gaps = 1/164 (0%)
 Frame = -1

Query: 767  RNFKKCLIKMFTKQKKEVVFLETVIGLSQQHRHCLVECVPLPRDLASEAPLYFKKAIDEA 588
            RNFKKCLI MF KQ+K++VFLETV+GL+QQ RHCLVEC+PLPR+ A +APLYFKKAIDEA
Sbjct: 647  RNFKKCLIMMFAKQEKDLVFLETVMGLAQQRRHCLVECIPLPRETAKQAPLYFKKAIDEA 706

Query: 587  EEEWSQHNAKKLIDTSVKGLHGSIPKDFPYFHVEFGLHKGFVHVIDDENQFKSSFGLNVI 408
            E+EWSQHNAKKLIDTS KGL GSIPKDFPYFHVEFGL+KGFVHVIDDE QFKSS GL+VI
Sbjct: 707  EDEWSQHNAKKLIDTSEKGLRGSIPKDFPYFHVEFGLNKGFVHVIDDEKQFKSSLGLDVI 766

Query: 407  RGMLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 279
            RGML+LP+ED +R R+HES EAQ++ V++FA++WEPFDWTK+L+
Sbjct: 767  RGMLRLPEEDMHRRRRHESAEAQKQAVVNFARDWEPFDWTKQLE 810


>ref|XP_002319799.1| predicted protein [Populus trichocarpa] gi|222858175|gb|EEE95722.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  273 bits (697), Expect = 4e-71
 Identities = 128/163 (78%), Positives = 145/163 (88%), Gaps = 1/163 (0%)
 Frame = -1

Query: 767 RNFKKCLIKMFTKQKKEVVFLETVIGLSQQHRHCLVECVPLPRDLASEAPLYFKKAIDEA 588
           RNFKKCLI MF+KQ+K++VFLETVI LSQQ RHCL+EC+PLPR++A +APLYFKKAIDEA
Sbjct: 113 RNFKKCLIMMFSKQEKDLVFLETVINLSQQRRHCLIECIPLPREIAKQAPLYFKKAIDEA 172

Query: 587 EEEWSQHNAKKLIDTSVKGLHGSIPKDFPYFHVEFGLHKGFVHVIDDENQFKSSFGLNVI 408
           E+EWSQHNAKKLIDTS KGL GSIPKDFPYFHVEFGL KGFVHVIDDE  FKSS GLNV+
Sbjct: 173 EDEWSQHNAKKLIDTSEKGLRGSIPKDFPYFHVEFGLSKGFVHVIDDEKNFKSSLGLNVL 232

Query: 407 RGMLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKEL 282
           RGML+LP+ED  R R+HES EAQ+  V  FAQ+WEPFDWTK+L
Sbjct: 233 RGMLRLPEEDMYRRRRHESVEAQKLAVAKFAQDWEPFDWTKQL 275


>gb|AAG50922.1|AC069159_23 unknown protein [Arabidopsis thaliana]
          Length = 807

 Score =  263 bits (671), Expect = 4e-68
 Identities = 123/164 (75%), Positives = 142/164 (86%), Gaps = 1/164 (0%)
 Frame = -1

Query: 767  RNFKKCLIKMFTKQKKEVVFLETVIGLSQQHRHCLVECVPLPRDLASEAPLYFKKAIDEA 588
            RNFKKCLI M+ K+ K+ VFLETVIGLSQQ RHCL+EC+P+P+++A E PLYFKKAIDEA
Sbjct: 644  RNFKKCLIMMYAKEGKDAVFLETVIGLSQQRRHCLIECIPIPQEIAKEGPLYFKKAIDEA 703

Query: 587  EEEWSQHNAKKLIDTSVKGLHGSIPKDFPYFHVEFGLHKGFVHVIDDENQFKSSFGLNVI 408
            E EWSQHNAKKLIDTSVKGL  SIPK+FPYFHVEFGL KGFVHVIDDE QF S+ GLNVI
Sbjct: 704  ESEWSQHNAKKLIDTSVKGLRNSIPKNFPYFHVEFGLDKGFVHVIDDEQQFNSNLGLNVI 763

Query: 407  RGMLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 279
            RGML+LP+ED  R R+ ES E+Q+K V +FA+EWE FDWTK+LD
Sbjct: 764  RGMLELPEEDMYRRRRQESVESQKKAVATFAREWEHFDWTKQLD 807


>ref|XP_002891949.1| hypothetical protein ARALYDRAFT_892793 [Arabidopsis lyrata subsp.
            lyrata] gi|297337791|gb|EFH68208.1| hypothetical protein
            ARALYDRAFT_892793 [Arabidopsis lyrata subsp. lyrata]
          Length = 691

 Score =  263 bits (671), Expect = 4e-68
 Identities = 123/164 (75%), Positives = 142/164 (86%), Gaps = 1/164 (0%)
 Frame = -1

Query: 767  RNFKKCLIKMFTKQKKEVVFLETVIGLSQQHRHCLVECVPLPRDLASEAPLYFKKAIDEA 588
            RNFKKCLI M+ K+ K+ VFLETVIGLSQQ RHCL+EC+P+P+++A E PLYFKKAIDEA
Sbjct: 528  RNFKKCLIMMYAKEGKDAVFLETVIGLSQQRRHCLIECIPIPQEIAKEGPLYFKKAIDEA 587

Query: 587  EEEWSQHNAKKLIDTSVKGLHGSIPKDFPYFHVEFGLHKGFVHVIDDENQFKSSFGLNVI 408
            E EWSQHNAKKLIDTSVKGL   IPK+FPYFHVEFGL KGFVHVIDDE QF S+ GLNVI
Sbjct: 588  ESEWSQHNAKKLIDTSVKGLRNCIPKNFPYFHVEFGLDKGFVHVIDDEQQFNSNLGLNVI 647

Query: 407  RGMLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 279
            RGML+LP+ED  R R+ ES E+Q+K V+SFA+EWE FDWTK+LD
Sbjct: 648  RGMLELPEEDMYRRRRQESVESQKKAVVSFAREWEHFDWTKQLD 691


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