BLASTX nr result
ID: Coptis25_contig00020703
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020703 (620 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004156281.1| PREDICTED: thylakoid lumenal 15.0 kDa protei... 231 6e-59 ref|XP_004143269.1| PREDICTED: thylakoid lumenal 15.0 kDa protei... 231 6e-59 ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|2... 228 7e-58 gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides] 228 7e-58 ref|XP_002864205.1| thylakoid lumen 15.0 kDa protein [Arabidopsi... 228 9e-58 >ref|XP_004156281.1| PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucumis sativus] Length = 228 Score = 231 bits (590), Expect = 6e-59 Identities = 110/120 (91%), Positives = 117/120 (97%) Frame = -3 Query: 618 EIRLAQEIADLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFN 439 EIRL QEIAD+EKDTG+KLRVLAQNYP TPGLAIKDFWQVDDRTIVFVADPTFGNILNFN Sbjct: 109 EIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFN 168 Query: 438 VGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDSSIEAAVMAISSCLKEPVGAGNCSEVQ 259 VGATVDLDIPRSFWSRLAGKYGN+FYWKEKGEDSSIE+AVMAISSCL+EPVGA NCSE++ Sbjct: 169 VGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGANNCSEIK 228 >ref|XP_004143269.1| PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucumis sativus] Length = 228 Score = 231 bits (590), Expect = 6e-59 Identities = 110/120 (91%), Positives = 117/120 (97%) Frame = -3 Query: 618 EIRLAQEIADLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFN 439 EIRL QEIAD+EKDTG+KLRVLAQNYP TPGLAIKDFWQVDDRTIVFVADPTFGNILNFN Sbjct: 109 EIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFN 168 Query: 438 VGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDSSIEAAVMAISSCLKEPVGAGNCSEVQ 259 VGATVDLDIPRSFWSRLAGKYGN+FYWKEKGEDSSIE+AVMAISSCL+EPVGA NCSE++ Sbjct: 169 VGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGANNCSEIK 228 >ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|222867520|gb|EEF04651.1| predicted protein [Populus trichocarpa] Length = 215 Score = 228 bits (581), Expect = 7e-58 Identities = 107/120 (89%), Positives = 116/120 (96%) Frame = -3 Query: 618 EIRLAQEIADLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFN 439 E RLA+EI+D+EKDTGFKLRVLAQNYPDTPGLAI+DFWQVDDRT+VFVADP FGNILNFN Sbjct: 96 EKRLAEEISDIEKDTGFKLRVLAQNYPDTPGLAIRDFWQVDDRTVVFVADPNFGNILNFN 155 Query: 438 VGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDSSIEAAVMAISSCLKEPVGAGNCSEVQ 259 VGA+VDLDIPRSFWSRLAGKYGNMFYWKEKGED+SIEAAVMAISSCL+EPVG NCSEV+ Sbjct: 156 VGASVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGPNNCSEVK 215 >gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides] Length = 220 Score = 228 bits (581), Expect = 7e-58 Identities = 107/120 (89%), Positives = 116/120 (96%) Frame = -3 Query: 618 EIRLAQEIADLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFN 439 E RLA+EI+D+EKDTGFKLRVLAQNYPDTPGLAI+DFWQVDDRT+VFVADP FGNILNFN Sbjct: 101 EKRLAEEISDIEKDTGFKLRVLAQNYPDTPGLAIRDFWQVDDRTVVFVADPNFGNILNFN 160 Query: 438 VGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDSSIEAAVMAISSCLKEPVGAGNCSEVQ 259 VGA+VDLDIPRSFWSRLAGKYGNMFYWKEKGED+SIEAAVMAISSCL+EPVG NCSEV+ Sbjct: 161 VGASVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGPNNCSEVK 220 >ref|XP_002864205.1| thylakoid lumen 15.0 kDa protein [Arabidopsis lyrata subsp. lyrata] gi|297310040|gb|EFH40464.1| thylakoid lumen 15.0 kDa protein [Arabidopsis lyrata subsp. lyrata] Length = 222 Score = 228 bits (580), Expect = 9e-58 Identities = 109/120 (90%), Positives = 115/120 (95%) Frame = -3 Query: 618 EIRLAQEIADLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFN 439 E R+AQEIA+LEKDTGFKLRVLAQNYP TPGLAIKDFWQVDD TIVFVADPTFGNILNFN Sbjct: 103 EKRIAQEIANLEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDSTIVFVADPTFGNILNFN 162 Query: 438 VGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDSSIEAAVMAISSCLKEPVGAGNCSEVQ 259 VGATVDLDIPRSFWSRLAGKYGNMFYWKEKGED+SIEAAVMAISSCL+EPVG NC+E+Q Sbjct: 163 VGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGPNNCAEIQ 222