BLASTX nr result

ID: Coptis25_contig00020703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020703
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156281.1| PREDICTED: thylakoid lumenal 15.0 kDa protei...   231   6e-59
ref|XP_004143269.1| PREDICTED: thylakoid lumenal 15.0 kDa protei...   231   6e-59
ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|2...   228   7e-58
gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides]      228   7e-58
ref|XP_002864205.1| thylakoid lumen 15.0 kDa protein [Arabidopsi...   228   9e-58

>ref|XP_004156281.1| PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like
           [Cucumis sativus]
          Length = 228

 Score =  231 bits (590), Expect = 6e-59
 Identities = 110/120 (91%), Positives = 117/120 (97%)
 Frame = -3

Query: 618 EIRLAQEIADLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFN 439
           EIRL QEIAD+EKDTG+KLRVLAQNYP TPGLAIKDFWQVDDRTIVFVADPTFGNILNFN
Sbjct: 109 EIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFN 168

Query: 438 VGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDSSIEAAVMAISSCLKEPVGAGNCSEVQ 259
           VGATVDLDIPRSFWSRLAGKYGN+FYWKEKGEDSSIE+AVMAISSCL+EPVGA NCSE++
Sbjct: 169 VGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGANNCSEIK 228


>ref|XP_004143269.1| PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like
           [Cucumis sativus]
          Length = 228

 Score =  231 bits (590), Expect = 6e-59
 Identities = 110/120 (91%), Positives = 117/120 (97%)
 Frame = -3

Query: 618 EIRLAQEIADLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFN 439
           EIRL QEIAD+EKDTG+KLRVLAQNYP TPGLAIKDFWQVDDRTIVFVADPTFGNILNFN
Sbjct: 109 EIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFN 168

Query: 438 VGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDSSIEAAVMAISSCLKEPVGAGNCSEVQ 259
           VGATVDLDIPRSFWSRLAGKYGN+FYWKEKGEDSSIE+AVMAISSCL+EPVGA NCSE++
Sbjct: 169 VGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGANNCSEIK 228


>ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|222867520|gb|EEF04651.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  228 bits (581), Expect = 7e-58
 Identities = 107/120 (89%), Positives = 116/120 (96%)
 Frame = -3

Query: 618 EIRLAQEIADLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFN 439
           E RLA+EI+D+EKDTGFKLRVLAQNYPDTPGLAI+DFWQVDDRT+VFVADP FGNILNFN
Sbjct: 96  EKRLAEEISDIEKDTGFKLRVLAQNYPDTPGLAIRDFWQVDDRTVVFVADPNFGNILNFN 155

Query: 438 VGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDSSIEAAVMAISSCLKEPVGAGNCSEVQ 259
           VGA+VDLDIPRSFWSRLAGKYGNMFYWKEKGED+SIEAAVMAISSCL+EPVG  NCSEV+
Sbjct: 156 VGASVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGPNNCSEVK 215


>gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 220

 Score =  228 bits (581), Expect = 7e-58
 Identities = 107/120 (89%), Positives = 116/120 (96%)
 Frame = -3

Query: 618 EIRLAQEIADLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFN 439
           E RLA+EI+D+EKDTGFKLRVLAQNYPDTPGLAI+DFWQVDDRT+VFVADP FGNILNFN
Sbjct: 101 EKRLAEEISDIEKDTGFKLRVLAQNYPDTPGLAIRDFWQVDDRTVVFVADPNFGNILNFN 160

Query: 438 VGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDSSIEAAVMAISSCLKEPVGAGNCSEVQ 259
           VGA+VDLDIPRSFWSRLAGKYGNMFYWKEKGED+SIEAAVMAISSCL+EPVG  NCSEV+
Sbjct: 161 VGASVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGPNNCSEVK 220


>ref|XP_002864205.1| thylakoid lumen 15.0 kDa protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310040|gb|EFH40464.1| thylakoid lumen 15.0 kDa
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 222

 Score =  228 bits (580), Expect = 9e-58
 Identities = 109/120 (90%), Positives = 115/120 (95%)
 Frame = -3

Query: 618 EIRLAQEIADLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFN 439
           E R+AQEIA+LEKDTGFKLRVLAQNYP TPGLAIKDFWQVDD TIVFVADPTFGNILNFN
Sbjct: 103 EKRIAQEIANLEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDSTIVFVADPTFGNILNFN 162

Query: 438 VGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDSSIEAAVMAISSCLKEPVGAGNCSEVQ 259
           VGATVDLDIPRSFWSRLAGKYGNMFYWKEKGED+SIEAAVMAISSCL+EPVG  NC+E+Q
Sbjct: 163 VGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGPNNCAEIQ 222


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