BLASTX nr result

ID: Coptis25_contig00020692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020692
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510114.1| conserved hypothetical protein [Ricinus comm...    70   3e-10
ref|XP_002303969.1| predicted protein [Populus trichocarpa] gi|2...    66   6e-09
ref|XP_004163242.1| PREDICTED: uncharacterized protein LOC101224...    65   1e-08
ref|XP_003637290.1| hypothetical protein MTR_080s0045 [Medicago ...    64   2e-08
ref|XP_002299164.1| predicted protein [Populus trichocarpa] gi|2...    63   4e-08

>ref|XP_002510114.1| conserved hypothetical protein [Ricinus communis]
           gi|223550815|gb|EEF52301.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 89

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
 Frame = +2

Query: 191 RVRVGNRGLKKLSHDIRTCEYEDVHVMWEMLKKTETE--MDVLPAKKRKRPFWNIFMYPH 364
           R+ +  RGL KL HD+R CEYEDV +MWEML++TETE      P K +KR FW  F +  
Sbjct: 21  RIGIRKRGLLKLRHDVRACEYEDVRIMWEMLRRTETESARQSQPVKSKKRCFWKCFSWAR 80

Query: 365 LS 370
            S
Sbjct: 81  CS 82


>ref|XP_002303969.1| predicted protein [Populus trichocarpa] gi|222841401|gb|EEE78948.1|
           predicted protein [Populus trichocarpa]
          Length = 90

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 30/66 (45%), Positives = 47/66 (71%)
 Frame = +2

Query: 173 SARLSDRVRVGNRGLKKLSHDIRTCEYEDVHVMWEMLKKTETEMDVLPAKKRKRPFWNIF 352
           SARL  R R    GL +L +D++TC YEDV VMWE+L+++E+E+     K+++RPFW +F
Sbjct: 17  SARL--RARKNGAGLLELHNDVQTCGYEDVQVMWEILRRSESELMASLPKRKQRPFWRVF 74

Query: 353 MYPHLS 370
           ++ + S
Sbjct: 75  VWSNHS 80


>ref|XP_004163242.1| PREDICTED: uncharacterized protein LOC101224184 [Cucumis sativus]
          Length = 88

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
 Frame = +2

Query: 179 RLSDRVRVGNRGLKKLSHDIRTCEYEDVHVMWEMLKKTETEMDVLPAKKR--KRPFWNIF 352
           R++ R+    RGL KL  D++ CEYEDVHVMWEMLK+ ET+  +  +++R  ++  WNIF
Sbjct: 17  RVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIF 76

Query: 353 MY 358
            +
Sbjct: 77  WW 78


>ref|XP_003637290.1| hypothetical protein MTR_080s0045 [Medicago truncatula]
           gi|355503225|gb|AES84428.1| hypothetical protein
           MTR_080s0045 [Medicago truncatula]
          Length = 161

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
 Frame = +2

Query: 182 LSDRV--RVGNRGLKKLSHDIRTCEYEDVHVMWEMLKKTETEMDVLPAKKRKRPFWNIFM 355
           LS R+  R    GL KL  D++TC YEDV VMWEML+KTETE+     K+++ PFW +F+
Sbjct: 85  LSTRINHRKNGAGLVKLQDDVQTCGYEDVQVMWEMLQKTETELVDNHHKRKQLPFWRLFV 144


>ref|XP_002299164.1| predicted protein [Populus trichocarpa] gi|222846422|gb|EEE83969.1|
           predicted protein [Populus trichocarpa]
          Length = 92

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 28/65 (43%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
 Frame = +2

Query: 182 LSDRVRVGNRG--LKKLSHDIRTCEYEDVHVMWEMLKKTETEMDVLPAKKRKRPFWNIFM 355
           +S RV+    G  L KL +D++TC YEDV VMWE+L+++E+E+     K+++RPFW +F+
Sbjct: 18  VSARVKARKNGANLLKLHNDVQTCGYEDVQVMWEILRRSESELMASHPKRKQRPFWRVFV 77

Query: 356 YPHLS 370
           + + S
Sbjct: 78  WSNHS 82


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