BLASTX nr result

ID: Coptis25_contig00020686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020686
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE62033.1| hypothetical protein OsJ_16815 [Oryza sativa Japo...    59   3e-07
gb|EEC78361.1| hypothetical protein OsI_18119 [Oryza sativa Indi...    59   3e-07
ref|NP_001237463.1| uncharacterized protein LOC100305840 [Glycin...    59   5e-07
ref|XP_002439106.1| hypothetical protein SORBIDRAFT_09g000600 [S...    58   7e-07
ref|NP_001144962.1| uncharacterized protein LOC100278105 [Zea ma...    58   7e-07

>gb|EEE62033.1| hypothetical protein OsJ_16815 [Oryza sativa Japonica Group]
          Length = 417

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +2

Query: 2   GGIECPGCKGTGRNKKNGNIFERWK 76
           G +ECPGCKGTGRNKKNGNIFERWK
Sbjct: 53  GAVECPGCKGTGRNKKNGNIFERWK 77


>gb|EEC78361.1| hypothetical protein OsI_18119 [Oryza sativa Indica Group]
          Length = 105

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +2

Query: 2   GGIECPGCKGTGRNKKNGNIFERWK 76
           G +ECPGCKGTGRNKKNGNIFERWK
Sbjct: 53  GAVECPGCKGTGRNKKNGNIFERWK 77


>ref|NP_001237463.1| uncharacterized protein LOC100305840 [Glycine max]
           gi|255626747|gb|ACU13718.1| unknown [Glycine max]
          Length = 108

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +2

Query: 2   GGIECPGCKGTGRNKKNGNIFERWK 76
           G IECPGCKGTG+NKKNGNIFERWK
Sbjct: 56  GAIECPGCKGTGKNKKNGNIFERWK 80


>ref|XP_002439106.1| hypothetical protein SORBIDRAFT_09g000600 [Sorghum bicolor]
           gi|241944391|gb|EES17536.1| hypothetical protein
           SORBIDRAFT_09g000600 [Sorghum bicolor]
          Length = 123

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +2

Query: 2   GGIECPGCKGTGRNKKNGNIFERWK 76
           G +ECPGCKGTG+NKKNGNIFERWK
Sbjct: 71  GAVECPGCKGTGKNKKNGNIFERWK 95


>ref|NP_001144962.1| uncharacterized protein LOC100278105 [Zea mays]
           gi|195649213|gb|ACG44074.1| hypothetical protein [Zea
           mays] gi|413950276|gb|AFW82925.1| hypothetical protein
           ZEAMMB73_671816 [Zea mays]
          Length = 119

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +2

Query: 2   GGIECPGCKGTGRNKKNGNIFERWK 76
           G +ECPGCKGTG+NKKNGNIFERWK
Sbjct: 67  GAVECPGCKGTGKNKKNGNIFERWK 91


Top