BLASTX nr result

ID: Coptis25_contig00020683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020683
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272432.2| PREDICTED: uncharacterized protein LOC100249...   202   3e-50
ref|XP_003529839.1| PREDICTED: uncharacterized protein LOC100808...   179   3e-43
ref|XP_002331180.1| predicted protein [Populus trichocarpa] gi|2...   178   6e-43
ref|XP_004141714.1| PREDICTED: uncharacterized protein LOC101207...   177   8e-43
ref|XP_002304121.1| predicted protein [Populus trichocarpa] gi|2...   177   8e-43

>ref|XP_002272432.2| PREDICTED: uncharacterized protein LOC100249804 [Vitis vinifera]
          Length = 260

 Score =  202 bits (514), Expect = 3e-50
 Identities = 111/189 (58%), Positives = 132/189 (69%), Gaps = 7/189 (3%)
 Frame = +3

Query: 3   AIGTFGNNDLKEDPQNNNTS-----SSDENQVDFTPEEVGKLQKELTKLLSRKPTQAEFE 167
           AIGTFGNNDLKE+P++ N       SS E  +DFTPEE+GKLQKELTKLLSRKP     +
Sbjct: 41  AIGTFGNNDLKENPESQNPPHQEDPSSSEELLDFTPEEIGKLQKELTKLLSRKPASNVEK 100

Query: 168 DGISLPLDKFLNCPSSLEVDRTISNTLCEDSDEKMVDDNTRSSVVLSNGKDMCMEK-NKS 344
           +   LPLDKFLNCPSSLEVDR IS TLC DSD+K  +     SV+L   +++C +   K+
Sbjct: 101 EIAELPLDKFLNCPSSLEVDRRISATLCSDSDDKDENIERTISVILGKCREVCTDHGKKN 160

Query: 345 IRXXXXXXXXXXMFVCRSGFSPAPSLIDPIPESRMEKLLRTLLHKKIYPQNSS-TTSVKK 521
           I           MFVCRSGF+PAPSL D + ESRMEKLLR +LHKKIYPQNSS  +S+KK
Sbjct: 161 IGKRSLSFLLKKMFVCRSGFAPAPSLRDTLQESRMEKLLRAMLHKKIYPQNSSRASSMKK 220

Query: 522 YLGDRHSSK 548
           YL D+   K
Sbjct: 221 YLEDKQRPK 229


>ref|XP_003529839.1| PREDICTED: uncharacterized protein LOC100808146 [Glycine max]
          Length = 263

 Score =  179 bits (454), Expect = 3e-43
 Identities = 105/189 (55%), Positives = 128/189 (67%), Gaps = 7/189 (3%)
 Frame = +3

Query: 3   AIGTFGN-NDLKEDPQNNNTS---SSDENQVDFTPEEVGKLQKELTKLLSRKPTQAEFED 170
           AIGTFGN +++KED  + NT    SS E   DFTPEE+G LQKELTKLL RKP     E 
Sbjct: 49  AIGTFGNKSEIKEDLDDQNTQEDPSSSEEIADFTPEEIGNLQKELTKLLRRKPN---VEK 105

Query: 171 GIS-LPLDKFLNCPSSLEVDRTISNTLCEDSDEKMVDDNTRSSVVLSNGKDMCMEKNK-S 344
            IS LPLD+FLNCPSSLEVDR ISN LC +S++K  D     SV++   KD+C +K K +
Sbjct: 106 EISELPLDRFLNCPSSLEVDRRISNALCSESEDKEEDIEKTLSVIIDKCKDICADKRKKA 165

Query: 345 IRXXXXXXXXXXMFVCRSGFSPAPSLIDPIPESRMEKLLRTLLHKKIYPQNSSTTS-VKK 521
           I           +FVCRSGF+P PSL D + ESRMEKLLRT+LHKKIY QNSS +  VKK
Sbjct: 166 IGKKSISFLLKKIFVCRSGFAPTPSLRDTLQESRMEKLLRTMLHKKIYTQNSSRSPLVKK 225

Query: 522 YLGDRHSSK 548
            + D+  ++
Sbjct: 226 GIEDKKMTR 234


>ref|XP_002331180.1| predicted protein [Populus trichocarpa] gi|222873301|gb|EEF10432.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score =  178 bits (451), Expect = 6e-43
 Identities = 104/194 (53%), Positives = 127/194 (65%), Gaps = 12/194 (6%)
 Frame = +3

Query: 3   AIGTFGNNDL---------KEDPQNNNTSSSDENQVDFTPEEVGKLQKELTKLLSRKPTQ 155
           AIGTFGN +L         +ED       SS  +  DFTPEE+GKLQKELTKLL+RKPT 
Sbjct: 47  AIGTFGNKELGESNEIQDAEEDQLVEEDPSSSHDLQDFTPEEIGKLQKELTKLLTRKPTS 106

Query: 156 AEFE-DGISLPLDKFLNCPSSLEVDRTISNTLCEDSDEKMVDDNTRSSVVLSNGKDMCME 332
            + E +  +LPLD+FLNCPSSLEVDR +SNT   D D+K  D     SV+L   KD+C  
Sbjct: 107 QDKEKETANLPLDRFLNCPSSLEVDRRVSNTAIGDVDDKEDDIERTISVILGRCKDICEN 166

Query: 333 -KNKSIRXXXXXXXXXXMFVCRSGFSPAPSLIDPIPESRMEKLLRTLLHKKIYPQNSS-T 506
            K K+I           +FVCRSGF+P PSL D + ESRMEKLLRTLLHKKI PQ++S  
Sbjct: 167 NKKKAIGKKSISFLLKKIFVCRSGFAPQPSLRDTLQESRMEKLLRTLLHKKINPQSTSRP 226

Query: 507 TSVKKYLGDRHSSK 548
           +S+KKY+ D+  SK
Sbjct: 227 SSMKKYIEDKKISK 240


>ref|XP_004141714.1| PREDICTED: uncharacterized protein LOC101207004 [Cucumis sativus]
           gi|449480495|ref|XP_004155910.1| PREDICTED:
           uncharacterized LOC101207004 [Cucumis sativus]
          Length = 264

 Score =  177 bits (450), Expect = 8e-43
 Identities = 104/193 (53%), Positives = 133/193 (68%), Gaps = 10/193 (5%)
 Frame = +3

Query: 3   AIGTFGNNDLK------EDPQNNNTSSSDENQVDFTPEEVGKLQKELTKLLSRKPTQAEF 164
           AIGTFGNN++K      ED +  N SSS+E  VDF+PEEVGKLQKELTKLLSRKP   + 
Sbjct: 46  AIGTFGNNEIKDDSDQREDIEEENPSSSEEI-VDFSPEEVGKLQKELTKLLSRKPNAEK- 103

Query: 165 EDGISLPLDKFLNCPSSLEVDRTISNTLCEDSDEKMVDDNTRSSVVLSNGKDMCME-KNK 341
                LPLD+FLNCPSSLEVDR ISN L  DSD+K  D     S+++   KD+C + K K
Sbjct: 104 -QVADLPLDRFLNCPSSLEVDRRISNPLSSDSDDKDEDIERTISLIIGKCKDICADSKKK 162

Query: 342 SIRXXXXXXXXXXMFVCRSGFS--PAPSLIDPIPESRMEKLLRTLLHKKIYPQNSS-TTS 512
           +I           +FVCR+GFS  P PSL + + ESRMEKLLRT+L +KI PQN+S ++S
Sbjct: 163 AIGKKSISFLLKKLFVCRTGFSPMPPPSLRETLQESRMEKLLRTILQRKISPQNASRSSS 222

Query: 513 VKKYLGDRHSSKN 551
           +K+Y+ ++ S+KN
Sbjct: 223 LKRYIEEKQSAKN 235


>ref|XP_002304121.1| predicted protein [Populus trichocarpa] gi|222841553|gb|EEE79100.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  177 bits (450), Expect = 8e-43
 Identities = 103/192 (53%), Positives = 131/192 (68%), Gaps = 8/192 (4%)
 Frame = +3

Query: 3   AIGTFGNNDLKEDPQ----NNNTSSSDENQVDFTPEEVGKLQKELTKLLSRKPTQAEFED 170
           AIGTFGNN+L+++ +      + S SD+ Q DFTPEE+GKLQKELT+LL+RKP+  + E 
Sbjct: 36  AIGTFGNNELRDNNEIQDVEEDPSPSDDLQ-DFTPEEIGKLQKELTELLTRKPSSQDKEK 94

Query: 171 GIS-LPLDKFLNCPSSLEVDRTISNTLCEDSDEKMVDDNTRSSVVLSNGKDMCMEKNK-- 341
            I+ LPLD+FLNCPSSLEVDR ISNT+  D D    D     SV+L   KD+C   NK  
Sbjct: 95  EIANLPLDRFLNCPSSLEVDRRISNTVISDVDNHEDDIERTISVILGRCKDICENNNKKK 154

Query: 342 SIRXXXXXXXXXXMFVCRSGFSPAPSLIDPIPESRMEKLLRTLLHKKIYPQNSS-TTSVK 518
           +I           +FVC SGF+P PSL D + ESRMEKLLRTLLHKKI PQ++S  +S+K
Sbjct: 155 AIGKRSISFLLKKIFVCTSGFAPQPSLRDTLHESRMEKLLRTLLHKKINPQSTSRASSMK 214

Query: 519 KYLGDRHSSKNN 554
           KY+ DR + K +
Sbjct: 215 KYIEDRSTPKKD 226


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