BLASTX nr result

ID: Coptis25_contig00020675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020675
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330217.1| predicted protein [Populus trichocarpa] gi|2...   194   2e-47
ref|XP_002271045.1| PREDICTED: uncharacterized protein LOC100265...   188   9e-46
ref|XP_002512452.1| conserved hypothetical protein [Ricinus comm...   187   2e-45
emb|CAN69598.1| hypothetical protein VITISV_014708 [Vitis vinifera]   186   3e-45
ref|XP_002889421.1| hypothetical protein ARALYDRAFT_470240 [Arab...   182   4e-44

>ref|XP_002330217.1| predicted protein [Populus trichocarpa] gi|222871673|gb|EEF08804.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  194 bits (492), Expect = 2e-47
 Identities = 92/165 (55%), Positives = 125/165 (75%), Gaps = 8/165 (4%)
 Frame = +1

Query: 49  CVLFISISFLPTQSSASKLS-------AYEVLRSYDFPVGLLPQGVTGYELEPKTGKFAA 207
           C++ I    LP+ SS+ + S       AYE+L  Y+FP GLLP+GV GY L+  TG+F+A
Sbjct: 9   CLILILSQSLPSSSSSQETSFLDQKPTAYEILGDYNFPKGLLPKGVVGYSLDTTTGRFSA 68

Query: 208 YLNGSCSFSIQG-YQLKYKSKITGYISKDKLTQLKGVTVKILFIWVNIIEVTSSGNELGF 384
           +LNGSCSFS++G YQL+YKS + GYIS+ +L++L+GV+VK+ F+WV+I+EV  +G++L F
Sbjct: 69  FLNGSCSFSLEGSYQLRYKSSVNGYISQGRLSRLEGVSVKVFFMWVDIVEVLRNGDDLEF 128

Query: 385 SVGIISANFPIDNFDESPQCGCGFECNKKKKKVWSIRTNPFVSSS 519
           SVGI  A FPIDNF+E PQCGCG  C+  K+KV  IR+NPFVSSS
Sbjct: 129 SVGIAGAGFPIDNFEECPQCGCGLNCSGAKRKVSKIRSNPFVSSS 173


>ref|XP_002271045.1| PREDICTED: uncharacterized protein LOC100265898 [Vitis vinifera]
          Length = 162

 Score =  188 bits (477), Expect = 9e-46
 Identities = 91/157 (57%), Positives = 121/157 (77%), Gaps = 1/157 (0%)
 Frame = +1

Query: 49  CVLFISISFLPTQSSASKLSAYEVLRSYDFPVGLLPQGVTGYELEPKTGKFAAYLNGSCS 228
           CV+F+S        S +   AYE+L+SY+FP+GLLP+G  GY+L+  TGKF AY NGSC 
Sbjct: 10  CVIFLSSIVTADDDSPT---AYEILQSYNFPMGLLPKGALGYDLDKDTGKFNAYFNGSCG 66

Query: 229 FSIQG-YQLKYKSKITGYISKDKLTQLKGVTVKILFIWVNIIEVTSSGNELGFSVGIISA 405
           FS++G YQLKYKS I+GYIS++KLT+L G++VK+LF+W+NI+EVT +G+++ FSVGI SA
Sbjct: 67  FSLEGSYQLKYKSTISGYISQNKLTKLSGISVKVLFLWLNIVEVTRNGDDMEFSVGIASA 126

Query: 406 NFPIDNFDESPQCGCGFECNKKKKKVWSIRTNPFVSS 516
            FPIDNF E PQCGCG +C     +V  ++TNPFVSS
Sbjct: 127 AFPIDNFFECPQCGCGLDC--VNGQVRKLKTNPFVSS 161


>ref|XP_002512452.1| conserved hypothetical protein [Ricinus communis]
           gi|255591191|ref|XP_002535460.1| conserved hypothetical
           protein [Ricinus communis] gi|223523035|gb|EEF26923.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223548413|gb|EEF49904.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score =  187 bits (475), Expect = 2e-45
 Identities = 89/157 (56%), Positives = 124/157 (78%), Gaps = 1/157 (0%)
 Frame = +1

Query: 49  CVLFISISFLPTQSSASKLSAYEVLRSYDFPVGLLPQGVTGYELEPKTGKFAAYLNGSCS 228
           C++ +  S    +S   + +AYE+L  Y+FP GLLP+GV GY+L+  +GKF+A+LNG+CS
Sbjct: 17  CIVLLFSSSWLAKSVNEEPTAYEILSDYNFPKGLLPKGVIGYDLDTTSGKFSAFLNGTCS 76

Query: 229 FSIQG-YQLKYKSKITGYISKDKLTQLKGVTVKILFIWVNIIEVTSSGNELGFSVGIISA 405
           FS++G YQL+YKS I G+ISK KL+ L+GV+VK+LF+WV+I+EV+ SG++L FSVGI  A
Sbjct: 77  FSLEGSYQLRYKSTIRGHISKGKLSSLQGVSVKLLFMWVDIVEVSRSGDDLEFSVGIAGA 136

Query: 406 NFPIDNFDESPQCGCGFECNKKKKKVWSIRTNPFVSS 516
            FPIDNF+ESPQCGCG +C   ++KV  +R+NPFVSS
Sbjct: 137 GFPIDNFEESPQCGCGLDCG-DRRKVSKMRSNPFVSS 172


>emb|CAN69598.1| hypothetical protein VITISV_014708 [Vitis vinifera]
          Length = 162

 Score =  186 bits (473), Expect = 3e-45
 Identities = 91/157 (57%), Positives = 120/157 (76%), Gaps = 1/157 (0%)
 Frame = +1

Query: 49  CVLFISISFLPTQSSASKLSAYEVLRSYDFPVGLLPQGVTGYELEPKTGKFAAYLNGSCS 228
           CV+F+S        S +   AYE+L+SY+FP+GLLP+G  GY+L+  TGKF AY NGSC 
Sbjct: 10  CVIFLSSIVTADDDSPT---AYEILQSYNFPMGLLPKGALGYDLDKDTGKFNAYFNGSCG 66

Query: 229 FSIQG-YQLKYKSKITGYISKDKLTQLKGVTVKILFIWVNIIEVTSSGNELGFSVGIISA 405
           FS++G YQLKYKS I+GYIS++KLT+L G +VK+LF+W+NI+EVT +G+++ FSVGI SA
Sbjct: 67  FSLEGSYQLKYKSTISGYISQNKLTKLSGXSVKVLFLWLNIVEVTRNGDDMEFSVGIASA 126

Query: 406 NFPIDNFDESPQCGCGFECNKKKKKVWSIRTNPFVSS 516
            FPIDNF E PQCGCG +C     +V  ++TNPFVSS
Sbjct: 127 AFPIDNFFECPQCGCGLDC--VNGQVRKLKTNPFVSS 161


>ref|XP_002889421.1| hypothetical protein ARALYDRAFT_470240 [Arabidopsis lyrata subsp.
           lyrata] gi|297335263|gb|EFH65680.1| hypothetical protein
           ARALYDRAFT_470240 [Arabidopsis lyrata subsp. lyrata]
          Length = 166

 Score =  182 bits (463), Expect = 4e-44
 Identities = 90/163 (55%), Positives = 121/163 (74%), Gaps = 1/163 (0%)
 Frame = +1

Query: 31  NLLFYFCVLFISISFLPTQSSASKLSAYEVLRSYDFPVGLLPQGVTGYELEPKTGKFAAY 210
           ++ F+F   F+S+      +   K +AY +L+S++FPVG+LP+GV  Y+L+P TGKF AY
Sbjct: 7   SIFFFFFFFFLSL-IAAAAADDDKPTAYTLLQSFNFPVGILPKGVVSYDLDPSTGKFHAY 65

Query: 211 LNGSCSFSIQG-YQLKYKSKITGYISKDKLTQLKGVTVKILFIWVNIIEVTSSGNELGFS 387
            N SCSF++QG YQL YKS I+GYIS++K+T+L GV VK+LF+W+NI+EV  + +EL FS
Sbjct: 66  FNKSCSFALQGSYQLDYKSTISGYISENKITKLTGVKVKVLFLWLNIVEVIRNEDELEFS 125

Query: 388 VGIISANFPIDNFDESPQCGCGFECNKKKKKVWSIRTNPFVSS 516
           VGI SANF ID F ESPQCGCGF+C  K K   ++  NPFVSS
Sbjct: 126 VGITSANFEIDEFYESPQCGCGFDCKTKTK---TLGRNPFVSS 165