BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020664
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27
ref|XP_002865541.1| pentatricopeptide repeat-containing protein ...   125   5e-27
ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containi...   122   2e-26
ref|NP_199046.1| pentatricopeptide repeat-containing protein [Ar...   122   2e-26
dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]        122   2e-26

>ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Cucumis sativus]
           gi|449489420|ref|XP_004158306.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Cucumis sativus]
          Length = 720

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/69 (85%), Positives = 69/69 (100%)
 Frame = -2

Query: 208 HALGRNDKLYEAFLLSQKRSLTPLTYNALIGACARNNDLEKALNLMNRMRRDGFQSDYVN 29
           HALGR++KLYEAF+LSQK++LTPLTYNALIGACARNNDLEKALNLM+RMR+DGFQSD++N
Sbjct: 187 HALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFIN 246

Query: 28  YSLVIQSLT 2
           YSL+IQSLT
Sbjct: 247 YSLIIQSLT 255


>ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297311376|gb|EFH41800.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 711

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/69 (85%), Positives = 69/69 (100%)
 Frame = -2

Query: 208 HALGRNDKLYEAFLLSQKRSLTPLTYNALIGACARNNDLEKALNLMNRMRRDGFQSDYVN 29
           HALGR++KLYEAFLLSQK++LTPLTYNALIGACARNND+EKALNL++RMR+DG+QSD+VN
Sbjct: 177 HALGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLISRMRQDGYQSDFVN 236

Query: 28  YSLVIQSLT 2
           YSLVIQSLT
Sbjct: 237 YSLVIQSLT 245


>ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Vitis vinifera]
           gi|297745544|emb|CBI40709.3| unnamed protein product
           [Vitis vinifera]
          Length = 695

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/69 (84%), Positives = 67/69 (97%)
 Frame = -2

Query: 208 HALGRNDKLYEAFLLSQKRSLTPLTYNALIGACARNNDLEKALNLMNRMRRDGFQSDYVN 29
           HALGR++KLYEAFLLSQ+++LTPLTYNALIGACARN+DLEKALNLM+RMRRDGF SD+VN
Sbjct: 162 HALGRSEKLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVN 221

Query: 28  YSLVIQSLT 2
           YS +IQSLT
Sbjct: 222 YSFIIQSLT 230


>ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75154282|sp|Q8L844.1|PP413_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g42310, mitochondrial; Flags: Precursor
           gi|21539517|gb|AAM53311.1| maize crp1 protein-like
           [Arabidopsis thaliana] gi|332007411|gb|AED94794.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 709

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/69 (84%), Positives = 68/69 (98%)
 Frame = -2

Query: 208 HALGRNDKLYEAFLLSQKRSLTPLTYNALIGACARNNDLEKALNLMNRMRRDGFQSDYVN 29
           HALGR++KLYEAFLLSQK++LTPLTYNALIGACARNND+EKALNL+ +MR+DG+QSD+VN
Sbjct: 175 HALGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVN 234

Query: 28  YSLVIQSLT 2
           YSLVIQSLT
Sbjct: 235 YSLVIQSLT 243


>dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
          Length = 680

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/69 (84%), Positives = 68/69 (98%)
 Frame = -2

Query: 208 HALGRNDKLYEAFLLSQKRSLTPLTYNALIGACARNNDLEKALNLMNRMRRDGFQSDYVN 29
           HALGR++KLYEAFLLSQK++LTPLTYNALIGACARNND+EKALNL+ +MR+DG+QSD+VN
Sbjct: 146 HALGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVN 205

Query: 28  YSLVIQSLT 2
           YSLVIQSLT
Sbjct: 206 YSLVIQSLT 214