BLASTX nr result

ID: Coptis25_contig00020663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020663
         (1764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15107.3| unnamed protein product [Vitis vinifera]              358   3e-96
ref|XP_002280600.1| PREDICTED: microtubule-associated protein TO...   358   3e-96
emb|CBI32067.3| unnamed protein product [Vitis vinifera]              325   3e-86
ref|XP_002267941.1| PREDICTED: microtubule-associated protein SP...   325   3e-86
ref|XP_002318624.1| predicted protein [Populus trichocarpa] gi|2...   323   9e-86

>emb|CBI15107.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score =  358 bits (919), Expect = 3e-96
 Identities = 212/440 (48%), Positives = 282/440 (64%), Gaps = 5/440 (1%)
 Frame = -2

Query: 1763 LIGCLVEFLSNEDWAARKASAEALLKLGLACRDMLSEFKSSCLVSFEARRFDKVKVVRET 1584
            L+ C V FLS+EDWAARKA+AE L+KL +  RDMLSEFKSSCL +FEARRFDKVK VR+T
Sbjct: 96   LVPCAVGFLSSEDWAARKAAAEVLVKLAVMERDMLSEFKSSCLKTFEARRFDKVKAVRDT 155

Query: 1583 MNQMIDAWKDVPGSYGEVSPPLQSRASSIDNTTGECXXXXXXXXXXXXXXSTQTKRNTIP 1404
            MNQM+ AWK++P    +VSPP QS++SS +N +                     ++ +IP
Sbjct: 156  MNQMLGAWKEIPDVSNDVSPPPQSQSSSKENASDGRYPLESRNSCTGGSEVPLMRKKSIP 215

Query: 1403 AXXXXXXXXXXXXTARKRGPMKNTNRISTPLFQRPDYNKNLDWKIEASVPHTSNFIMDSE 1224
                         T R+RGP+   ++  + +F++ +  K  D K+E + PH  + +   E
Sbjct: 216  TSISPQLNSSSATTVRRRGPV---DKSGSAMFRKLERKKASDLKVEVTAPHAPSVMRIHE 272

Query: 1223 DRFEERNEKIQEPEMNQKVQESEVQKNSQHPKPEDRSNFFNKNSDEKIHKVGGFSPGSRV 1044
            D  ++++EK  E   N+K         ++  KPE R   F KNSD+K++K GGF  GSRV
Sbjct: 273  DGLKKKDEKAPERGENEK---------NRFTKPETRRVLFTKNSDDKMNKFGGFRSGSRV 323

Query: 1043 VLYNDECSESTV--SNDSEEHNGNLKETEDLSLIRKQLLQIENQQSILLDLLQRFMGSSQ 870
            V   +E SE+TV  SN +E  + N KE EDLSLIRKQL+QIENQQS LL+LL++FMGSSQ
Sbjct: 324  VPCQEENSETTVEVSNTTEVPHRNHKECEDLSLIRKQLVQIENQQSSLLNLLEKFMGSSQ 383

Query: 869  NGIRSLETRVNGLEMALDEIMYDMTVSTGRTSTSDPSENTCCKLPGAEFLSPKFWKKTDG 690
            NG+RSLETRV+GLE+ALDEI +D+ VS  R S++D +  TCC LPGA+FLS KFW+KT+G
Sbjct: 384  NGLRSLETRVHGLELALDEISFDLAVSNRRMSSTDTAGATCCMLPGADFLSSKFWRKTEG 443

Query: 689  RYSTSRFTFS---GSNSWPHNMVDKDTSAEPSKLENRKFYHQAGGGGFVVNPLAAENRND 519
            R STSRF+ S    S +    +  K+ +A   K EN +F  Q GGGGFVVNPL AE  +D
Sbjct: 444  RGSTSRFSPSHATQSGTAMRYIAGKNDNAGTFKSENLRFRLQ-GGGGFVVNPL-AEIPSD 501

Query: 518  FRRNPEVYSNSLHTSIFQDA 459
             R   EV SN +  +  + A
Sbjct: 502  SRDISEVSSNRISKNAHETA 521


>ref|XP_002280600.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Vitis
            vinifera]
          Length = 638

 Score =  358 bits (919), Expect = 3e-96
 Identities = 212/440 (48%), Positives = 282/440 (64%), Gaps = 5/440 (1%)
 Frame = -2

Query: 1763 LIGCLVEFLSNEDWAARKASAEALLKLGLACRDMLSEFKSSCLVSFEARRFDKVKVVRET 1584
            L+ C V FLS+EDWAARKA+AE L+KL +  RDMLSEFKSSCL +FEARRFDKVK VR+T
Sbjct: 213  LVPCAVGFLSSEDWAARKAAAEVLVKLAVMERDMLSEFKSSCLKTFEARRFDKVKAVRDT 272

Query: 1583 MNQMIDAWKDVPGSYGEVSPPLQSRASSIDNTTGECXXXXXXXXXXXXXXSTQTKRNTIP 1404
            MNQM+ AWK++P    +VSPP QS++SS +N +                     ++ +IP
Sbjct: 273  MNQMLGAWKEIPDVSNDVSPPPQSQSSSKENASDGRYPLESRNSCTGGSEVPLMRKKSIP 332

Query: 1403 AXXXXXXXXXXXXTARKRGPMKNTNRISTPLFQRPDYNKNLDWKIEASVPHTSNFIMDSE 1224
                         T R+RGP+   ++  + +F++ +  K  D K+E + PH  + +   E
Sbjct: 333  TSISPQLNSSSATTVRRRGPV---DKSGSAMFRKLERKKASDLKVEVTAPHAPSVMRIHE 389

Query: 1223 DRFEERNEKIQEPEMNQKVQESEVQKNSQHPKPEDRSNFFNKNSDEKIHKVGGFSPGSRV 1044
            D  ++++EK  E   N+K         ++  KPE R   F KNSD+K++K GGF  GSRV
Sbjct: 390  DGLKKKDEKAPERGENEK---------NRFTKPETRRVLFTKNSDDKMNKFGGFRSGSRV 440

Query: 1043 VLYNDECSESTV--SNDSEEHNGNLKETEDLSLIRKQLLQIENQQSILLDLLQRFMGSSQ 870
            V   +E SE+TV  SN +E  + N KE EDLSLIRKQL+QIENQQS LL+LL++FMGSSQ
Sbjct: 441  VPCQEENSETTVEVSNTTEVPHRNHKECEDLSLIRKQLVQIENQQSSLLNLLEKFMGSSQ 500

Query: 869  NGIRSLETRVNGLEMALDEIMYDMTVSTGRTSTSDPSENTCCKLPGAEFLSPKFWKKTDG 690
            NG+RSLETRV+GLE+ALDEI +D+ VS  R S++D +  TCC LPGA+FLS KFW+KT+G
Sbjct: 501  NGLRSLETRVHGLELALDEISFDLAVSNRRMSSTDTAGATCCMLPGADFLSSKFWRKTEG 560

Query: 689  RYSTSRFTFS---GSNSWPHNMVDKDTSAEPSKLENRKFYHQAGGGGFVVNPLAAENRND 519
            R STSRF+ S    S +    +  K+ +A   K EN +F  Q GGGGFVVNPL AE  +D
Sbjct: 561  RGSTSRFSPSHATQSGTAMRYIAGKNDNAGTFKSENLRFRLQ-GGGGFVVNPL-AEIPSD 618

Query: 518  FRRNPEVYSNSLHTSIFQDA 459
             R   EV SN +  +  + A
Sbjct: 619  SRDISEVSSNRISKNAHETA 638


>emb|CBI32067.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  325 bits (832), Expect = 3e-86
 Identities = 191/415 (46%), Positives = 258/415 (62%), Gaps = 6/415 (1%)
 Frame = -2

Query: 1763 LIGCLVEFLSNEDWAARKASAEALLKLGLACRDMLSEFKSSCLVSFEARRFDKVKVVRET 1584
            L+ CLVEFLS+EDWAARKASAEAL +L L  RD+ +EFKSS L S E+RRFDKVKVVR+T
Sbjct: 222  LVPCLVEFLSSEDWAARKASAEALARLALVERDLATEFKSSSLSSLESRRFDKVKVVRDT 281

Query: 1583 MNQMIDAWKDVPGSYGEVSPPLQSRASSIDNTTGECXXXXXXXXXXXXXXSTQTKRNTIP 1404
            MN+ +D WK++P     + P   S+ASS DN  G C              + Q K+  I 
Sbjct: 282  MNRTLDLWKELPCDSNGLLPLSPSKASSKDNGAGGCFPPASKISCDVGFETPQPKK--II 339

Query: 1403 AXXXXXXXXXXXXTARKRGPMKNTN--RISTPLFQRPDYNKNLDWKIEASVPHTSNFIMD 1230
                         TARKR P++++N  + +T +F++ D  K  DWK+E +VPH S+  + 
Sbjct: 340  PTRSPPSDNSLVTTARKRSPLQSSNNGKSTTAMFRKLDCKKPSDWKVEVAVPHPSSSKVA 399

Query: 1229 SEDRFEERNEKIQEPEMNQKVQESEVQKNSQHPKPEDRSNFFNKNSDEKIHKVGGFSPGS 1050
             ED  + R   + + E N    +S         +PE     F+K S+EK+HK G    GS
Sbjct: 400  CEDDLKRRYLVVSDSEENGNCGDS---------RPETNRVLFSKISNEKMHKFGCLRSGS 450

Query: 1049 RVVLYNDECSESTVSNDS----EEHNGNLKETEDLSLIRKQLLQIENQQSILLDLLQRFM 882
            R+V +++  +  +   DS    EE   N K+ EDLSLIRKQL+QIENQQS +L+LLQRF+
Sbjct: 451  RIVPFHENNNSESAVVDSNATEEEIYENQKDIEDLSLIRKQLIQIENQQSSMLNLLQRFI 510

Query: 881  GSSQNGIRSLETRVNGLEMALDEIMYDMTVSTGRTSTSDPSENTCCKLPGAEFLSPKFWK 702
            G+SQ+GI SLETRVNGLEM L+EI +D+ +S+GR S SD + NTCCKLPGAEFLS KFWK
Sbjct: 511  GNSQSGINSLETRVNGLEMVLEEISFDLAISSGRVSNSDSAGNTCCKLPGAEFLSSKFWK 570

Query: 701  KTDGRYSTSRFTFSGSNSWPHNMVDKDTSAEPSKLENRKFYHQAGGGGFVVNPLA 537
            +T+G ++TSRF+ +GS      + +       + ++ +K  HQ    GFV NPLA
Sbjct: 571  RTEG-HTTSRFSSTGSIQALTTINNMPNKYASNMVDEQKLQHQ-NLDGFVANPLA 623


>ref|XP_002267941.1| PREDICTED: microtubule-associated protein SPIRAL2-like [Vitis
            vinifera]
          Length = 654

 Score =  325 bits (832), Expect = 3e-86
 Identities = 191/415 (46%), Positives = 258/415 (62%), Gaps = 6/415 (1%)
 Frame = -2

Query: 1763 LIGCLVEFLSNEDWAARKASAEALLKLGLACRDMLSEFKSSCLVSFEARRFDKVKVVRET 1584
            L+ CLVEFLS+EDWAARKASAEAL +L L  RD+ +EFKSS L S E+RRFDKVKVVR+T
Sbjct: 223  LVPCLVEFLSSEDWAARKASAEALARLALVERDLATEFKSSSLSSLESRRFDKVKVVRDT 282

Query: 1583 MNQMIDAWKDVPGSYGEVSPPLQSRASSIDNTTGECXXXXXXXXXXXXXXSTQTKRNTIP 1404
            MN+ +D WK++P     + P   S+ASS DN  G C              + Q K+  I 
Sbjct: 283  MNRTLDLWKELPCDSNGLLPLSPSKASSKDNGAGGCFPPASKISCDVGFETPQPKK--II 340

Query: 1403 AXXXXXXXXXXXXTARKRGPMKNTN--RISTPLFQRPDYNKNLDWKIEASVPHTSNFIMD 1230
                         TARKR P++++N  + +T +F++ D  K  DWK+E +VPH S+  + 
Sbjct: 341  PTRSPPSDNSLVTTARKRSPLQSSNNGKSTTAMFRKLDCKKPSDWKVEVAVPHPSSSKVA 400

Query: 1229 SEDRFEERNEKIQEPEMNQKVQESEVQKNSQHPKPEDRSNFFNKNSDEKIHKVGGFSPGS 1050
             ED  + R   + + E N    +S         +PE     F+K S+EK+HK G    GS
Sbjct: 401  CEDDLKRRYLVVSDSEENGNCGDS---------RPETNRVLFSKISNEKMHKFGCLRSGS 451

Query: 1049 RVVLYNDECSESTVSNDS----EEHNGNLKETEDLSLIRKQLLQIENQQSILLDLLQRFM 882
            R+V +++  +  +   DS    EE   N K+ EDLSLIRKQL+QIENQQS +L+LLQRF+
Sbjct: 452  RIVPFHENNNSESAVVDSNATEEEIYENQKDIEDLSLIRKQLIQIENQQSSMLNLLQRFI 511

Query: 881  GSSQNGIRSLETRVNGLEMALDEIMYDMTVSTGRTSTSDPSENTCCKLPGAEFLSPKFWK 702
            G+SQ+GI SLETRVNGLEM L+EI +D+ +S+GR S SD + NTCCKLPGAEFLS KFWK
Sbjct: 512  GNSQSGINSLETRVNGLEMVLEEISFDLAISSGRVSNSDSAGNTCCKLPGAEFLSSKFWK 571

Query: 701  KTDGRYSTSRFTFSGSNSWPHNMVDKDTSAEPSKLENRKFYHQAGGGGFVVNPLA 537
            +T+G ++TSRF+ +GS      + +       + ++ +K  HQ    GFV NPLA
Sbjct: 572  RTEG-HTTSRFSSTGSIQALTTINNMPNKYASNMVDEQKLQHQ-NLDGFVANPLA 624


>ref|XP_002318624.1| predicted protein [Populus trichocarpa] gi|222859297|gb|EEE96844.1|
            predicted protein [Populus trichocarpa]
          Length = 624

 Score =  323 bits (828), Expect = 9e-86
 Identities = 194/429 (45%), Positives = 257/429 (59%), Gaps = 7/429 (1%)
 Frame = -2

Query: 1763 LIGCLVEFLSNEDWAARKASAEALLKLGLACRDMLSEFKSSCLVSFEARRFDKVKVVRET 1584
            L+ CLV FLS EDW +RKA+AEAL KL +  RD ++EFKS CL  FE+RR+DKVK  RE 
Sbjct: 210  LVKCLVGFLSTEDWNSRKAAAEALRKLAVVERDGVAEFKSECLKVFESRRYDKVKAAREV 269

Query: 1583 MNQMIDAWKDVPGSYGEVSPPLQSRASSIDNTT-GECXXXXXXXXXXXXXXSTQTKRNTI 1407
            MN+ I+AWK VP    E SPP +S ASS ++ + G                    K++ +
Sbjct: 270  MNETIEAWKQVPDVSEEESPPPRSLASSREDASDGRHGSGSKKLHLAGSEAPQMMKKSIL 329

Query: 1406 PAXXXXXXXXXXXXTARKRGPMKNTNRISTP-LFQRPDYNKNLDWKIEASVPHTSNFIMD 1230
                          TARKRGP+K+T+  + P ++ + D  K +DWK+E SVP++ +    
Sbjct: 330  DFKNTPPDSSLIATTARKRGPLKSTDEGTNPAMYGKVDQKKMVDWKVEISVPNSISSTAA 389

Query: 1229 SEDRFEERNEKIQEPEMNQKVQESEVQKNSQHPKPEDRSNFFNKNSDEKIHKVGGFSPGS 1050
             E+  + +N K+ E                +  K E + + F+KNSD+K  K GGF  GS
Sbjct: 390  GENDLKMKNAKVPE---------------KRFAKAETKRSLFSKNSDDKKLKFGGFKSGS 434

Query: 1049 RVVLYNDECSESTV--SNDSEEHNGNLKETEDLSLIRKQLLQIENQQSILLDLLQRFMGS 876
            RV   ++E   STV  S+ +E H+ N  E EDLSLIR QL+QIE QQS LLDLLQ F+GS
Sbjct: 435  RVAPCHEESPHSTVVASSGTENHHSNHNECEDLSLIRFQLVQIERQQSSLLDLLQSFIGS 494

Query: 875  SQNGIRSLETRVNGLEMALDEIMYDMTVSTGRTSTSDPSENTCCKLPGAEFLSPKFWKKT 696
            SQNG+ SLETRV GLE+ALDEI YD+ VS+GR + +D +  TCC LPGA+FLS KFWKKT
Sbjct: 495  SQNGMHSLETRVRGLELALDEISYDLAVSSGRMTNTDSNRTTCCLLPGADFLSSKFWKKT 554

Query: 695  DGRYSTSRFTFSGS---NSWPHNMVDKDTSAEPSKLENRKFYHQAGGGGFVVNPLAAENR 525
            +GRYS SR   S     ++   +  D++  +E   L N++   Q GGGG +VNPL AE  
Sbjct: 555  EGRYSNSRIYSSRGTPLSAVVRHRADRNGHSETINLGNQRLRLQ-GGGGLIVNPL-AEIH 612

Query: 524  NDFRRNPEV 498
               R N EV
Sbjct: 613  GGSRLNSEV 621


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