BLASTX nr result

ID: Coptis25_contig00020652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020652
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265726.2| PREDICTED: protein SCAI homolog [Vitis vinif...   167   2e-39
emb|CBI38092.3| unnamed protein product [Vitis vinifera]              167   2e-39
emb|CAN82230.1| hypothetical protein VITISV_033343 [Vitis vinifera]   166   5e-39
ref|XP_002524004.1| signal transducer, putative [Ricinus communi...   159   7e-37
ref|XP_002319760.1| predicted protein [Populus trichocarpa] gi|2...   158   9e-37

>ref|XP_002265726.2| PREDICTED: protein SCAI homolog [Vitis vinifera]
          Length = 638

 Score =  167 bits (423), Expect = 2e-39
 Identities = 97/196 (49%), Positives = 111/196 (56%), Gaps = 1/196 (0%)
 Frame = +3

Query: 72  MMMVSCFLCL*ETDFKDWKLVVQEIVRFLNNDTAFMNFRPLRFSLVLDSSTDNIQLLPSF 251
           M++  C     E DFK+WKLVVQEIVRFL  DT FMN RPLR+SLVLD S D +  +   
Sbjct: 163 MLVDECKRTFQEADFKEWKLVVQEIVRFLKADTTFMNTRPLRYSLVLDPSPDCLPQVSIS 222

Query: 252 DGKRSLKLRDAVLCSYHHNGVFYR*SCCWVDMVICTCVLGYRILQGTQTGDASCVKFTEL 431
            GKR+L+LRDA+L SYHHN                                   VKF+EL
Sbjct: 223 IGKRNLRLRDAILSSYHHNE----------------------------------VKFSEL 248

Query: 432 TLDTFMMLQSLEWEPSGSFYQI-TKXXXXXXXXXXXXXXXXXXRVNYSQEITDPTLPTNP 608
           TLDTF MLQ LEWEPSGSFYQ                      R+NYS +ITDPTLP NP
Sbjct: 249 TLDTFRMLQCLEWEPSGSFYQSGGASLSGMGTKIGQNGSPGPSRINYSHDITDPTLPPNP 308

Query: 609 RKAILYRPAVPHLIAV 656
           RKAILYRP++ H IAV
Sbjct: 309 RKAILYRPSITHFIAV 324


>emb|CBI38092.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  167 bits (423), Expect = 2e-39
 Identities = 97/196 (49%), Positives = 111/196 (56%), Gaps = 1/196 (0%)
 Frame = +3

Query: 72  MMMVSCFLCL*ETDFKDWKLVVQEIVRFLNNDTAFMNFRPLRFSLVLDSSTDNIQLLPSF 251
           M++  C     E DFK+WKLVVQEIVRFL  DT FMN RPLR+SLVLD S D +  +   
Sbjct: 163 MLVDECKRTFQEADFKEWKLVVQEIVRFLKADTTFMNTRPLRYSLVLDPSPDCLPQVSIS 222

Query: 252 DGKRSLKLRDAVLCSYHHNGVFYR*SCCWVDMVICTCVLGYRILQGTQTGDASCVKFTEL 431
            GKR+L+LRDA+L SYHHN                                   VKF+EL
Sbjct: 223 IGKRNLRLRDAILSSYHHNE----------------------------------VKFSEL 248

Query: 432 TLDTFMMLQSLEWEPSGSFYQI-TKXXXXXXXXXXXXXXXXXXRVNYSQEITDPTLPTNP 608
           TLDTF MLQ LEWEPSGSFYQ                      R+NYS +ITDPTLP NP
Sbjct: 249 TLDTFRMLQCLEWEPSGSFYQSGGASLSGMGTKIGQNGSPGPSRINYSHDITDPTLPPNP 308

Query: 609 RKAILYRPAVPHLIAV 656
           RKAILYRP++ H IAV
Sbjct: 309 RKAILYRPSITHFIAV 324


>emb|CAN82230.1| hypothetical protein VITISV_033343 [Vitis vinifera]
          Length = 441

 Score =  166 bits (419), Expect = 5e-39
 Identities = 96/196 (48%), Positives = 111/196 (56%), Gaps = 1/196 (0%)
 Frame = +3

Query: 72  MMMVSCFLCL*ETDFKDWKLVVQEIVRFLNNDTAFMNFRPLRFSLVLDSSTDNIQLLPSF 251
           M++  C     E DFK+WKLVVQEIVRFL  DT F+N RPLR+SLVLD S D +  +   
Sbjct: 163 MLVDECKRTFQEADFKEWKLVVQEIVRFLKADTTFVNTRPLRYSLVLDPSPDCLPQVSIS 222

Query: 252 DGKRSLKLRDAVLCSYHHNGVFYR*SCCWVDMVICTCVLGYRILQGTQTGDASCVKFTEL 431
            GKR+L+LRDA+L SYHHN                                   VKF+EL
Sbjct: 223 IGKRNLRLRDAILSSYHHNE----------------------------------VKFSEL 248

Query: 432 TLDTFMMLQSLEWEPSGSFYQI-TKXXXXXXXXXXXXXXXXXXRVNYSQEITDPTLPTNP 608
           TLDTF MLQ LEWEPSGSFYQ                      R+NYS +ITDPTLP NP
Sbjct: 249 TLDTFRMLQCLEWEPSGSFYQSGGASLSGMGTKIGQNGSPGPSRINYSHDITDPTLPPNP 308

Query: 609 RKAILYRPAVPHLIAV 656
           RKAILYRP++ H IAV
Sbjct: 309 RKAILYRPSITHFIAV 324


>ref|XP_002524004.1| signal transducer, putative [Ricinus communis]
           gi|223536731|gb|EEF38372.1| signal transducer, putative
           [Ricinus communis]
          Length = 761

 Score =  159 bits (401), Expect = 7e-37
 Identities = 90/195 (46%), Positives = 113/195 (57%)
 Frame = +3

Query: 72  MMMVSCFLCL*ETDFKDWKLVVQEIVRFLNNDTAFMNFRPLRFSLVLDSSTDNIQLLPSF 251
           +++  C     ETDFK+WKLVVQEI+RFL  D+AFMN RPLR+SLVLD   D++  + + 
Sbjct: 174 LLVDECRRTFQETDFKEWKLVVQEIIRFLKADSAFMNIRPLRYSLVLDPHPDSLLHVVT- 232

Query: 252 DGKRSLKLRDAVLCSYHHNGVFYR*SCCWVDMVICTCVLGYRILQGTQTGDASCVKFTEL 431
             +R+L+LRDA+L SYHHN V                                  KF+EL
Sbjct: 233 --RRNLRLRDAILTSYHHNEV----------------------------------KFSEL 256

Query: 432 TLDTFMMLQSLEWEPSGSFYQITKXXXXXXXXXXXXXXXXXXRVNYSQEITDPTLPTNPR 611
           TLDTF MLQ LEWEPSGSFYQ                     R+NY+ +ITDPTLP N R
Sbjct: 257 TLDTFRMLQCLEWEPSGSFYQSNSIKYGQNGGPGPS------RINYTHDITDPTLPPNSR 310

Query: 612 KAILYRPAVPHLIAV 656
           KA+LYRP++ HL+AV
Sbjct: 311 KAVLYRPSITHLLAV 325


>ref|XP_002319760.1| predicted protein [Populus trichocarpa] gi|222858136|gb|EEE95683.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score =  158 bits (400), Expect = 9e-37
 Identities = 93/195 (47%), Positives = 110/195 (56%)
 Frame = +3

Query: 72  MMMVSCFLCL*ETDFKDWKLVVQEIVRFLNNDTAFMNFRPLRFSLVLDSSTDNIQLLPSF 251
           +++  C     ETDFK+WKLVVQEI RFL  DTAFMN RPLR+SLVLD   D+   LP  
Sbjct: 158 ILVDECRKAFQETDFKEWKLVVQEISRFLKADTAFMNIRPLRYSLVLDLHPDS---LPRV 214

Query: 252 DGKRSLKLRDAVLCSYHHNGVFYR*SCCWVDMVICTCVLGYRILQGTQTGDASCVKFTEL 431
             +RSLKLRDA+L SYHHN                                   VKF+EL
Sbjct: 215 ATRRSLKLRDAILSSYHHNE----------------------------------VKFSEL 240

Query: 432 TLDTFMMLQSLEWEPSGSFYQITKXXXXXXXXXXXXXXXXXXRVNYSQEITDPTLPTNPR 611
           T+DTF MLQ LEWEPSGSFYQ +                   R N++Q+I DPTLP N R
Sbjct: 241 TVDTFRMLQCLEWEPSGSFYQSSS------AKIGQNGGSGSSRTNHAQDIADPTLPLNSR 294

Query: 612 KAILYRPAVPHLIAV 656
           KA+LYRP+V H +AV
Sbjct: 295 KAVLYRPSVTHFLAV 309


Top