BLASTX nr result

ID: Coptis25_contig00020649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020649
         (1382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283201.1| PREDICTED: anaphase-promoting complex subuni...   647   0.0  
ref|XP_004146390.1| PREDICTED: anaphase-promoting complex subuni...   640   0.0  
ref|XP_002887756.1| cell division cycle family protein [Arabidop...   625   e-176
ref|NP_565188.1| anaphase-promoting complex subunit 6 [Arabidops...   620   e-175
ref|XP_002523647.1| cell division cycle, putative [Ricinus commu...   617   e-174

>ref|XP_002283201.1| PREDICTED: anaphase-promoting complex subunit 6 [Vitis vinifera]
            gi|302142883|emb|CBI20178.3| unnamed protein product
            [Vitis vinifera]
          Length = 545

 Score =  647 bits (1668), Expect = 0.0
 Identities = 305/382 (79%), Positives = 335/382 (87%)
 Frame = +3

Query: 6    WYKAAIKADPLCYEALERLIENHMXXXXXXXXXXXXXXFAPEDKWLSSFYSCLIKKYDKE 185
            WYKAAIKADPLCYEALE LIENHM              FAPED WLSSFYSCLIKKYDKE
Sbjct: 152  WYKAAIKADPLCYEALECLIENHMLTSEEEASLLSSLQFAPEDGWLSSFYSCLIKKYDKE 211

Query: 186  SMVEAKFRKLEQETCDNNTASLPVACTLKNNTDLLACKAEYYHQSGEYQKCFELTSALLE 365
            ++VEAKF +LE+++C+ N +     CTLKNNTDLLACKAEYYHQ GEYQKCFELT+ LLE
Sbjct: 212  TVVEAKFTELEKQSCNINPSDPSFICTLKNNTDLLACKAEYYHQCGEYQKCFELTAILLE 271

Query: 366  RDPFHLKSTLVHLTAAMELGHSNELYLMACNLVKDYPQKALSWFAVGCYYYCIKKYGESR 545
            +DPFH+K TLVHL AAMELGHSNELYLMACNLVKDYPQKALSWFAVGCYYYCIKKY +SR
Sbjct: 272  KDPFHMKCTLVHLAAAMELGHSNELYLMACNLVKDYPQKALSWFAVGCYYYCIKKYDQSR 331

Query: 546  RFFSKATTLDGTFLPAWIGHGNAFAAQEEGDQAMSSFRTAARSFPGCHLPTLYIGMEYMR 725
            R+FSKA  LDGTF PA IG GNA+AAQEEGDQAM ++RTAAR FPGCHLPTLYIGMEYMR
Sbjct: 332  RYFSKAANLDGTFPPALIGCGNAYAAQEEGDQAMLAYRTAARLFPGCHLPTLYIGMEYMR 391

Query: 726  THNLKLAEKFFMQAKAICPSDPLVYNELGVVAYHMKDYKSAVWWFEKTLSRVPSPLSEIW 905
            TH+ KLAE+FFMQAK ICPSDPLVYNELGVVAY MK+Y  AVWWF+KTLS +PS LSE+W
Sbjct: 392  THSFKLAEQFFMQAKTICPSDPLVYNELGVVAYDMKEYNKAVWWFQKTLSHIPSSLSEMW 451

Query: 906  EPTVVNLAHAMRKLRKYHEAVSYYEKALAISTRSLSTYAGLAYTYHLQDNYDAAITYYHK 1085
            EPT+VNLAHA RKL+ YHEA+S+YEKAL +STRSLSTYAGLAYTYHLQDN+ AAITYYHK
Sbjct: 452  EPTIVNLAHAYRKLKMYHEAISFYEKALTLSTRSLSTYAGLAYTYHLQDNFPAAITYYHK 511

Query: 1086 ALWLKPDDQFCTDMLTVALVDE 1151
            ALWLKPDDQFCT+MLT+ALVDE
Sbjct: 512  ALWLKPDDQFCTEMLTLALVDE 533


>ref|XP_004146390.1| PREDICTED: anaphase-promoting complex subunit 6-like [Cucumis
            sativus]
          Length = 547

 Score =  640 bits (1650), Expect = 0.0
 Identities = 299/383 (78%), Positives = 336/383 (87%)
 Frame = +3

Query: 6    WYKAAIKADPLCYEALERLIENHMXXXXXXXXXXXXXXFAPEDKWLSSFYSCLIKKYDKE 185
            WYKAAIKADPLCYEALE LIE+HM              F PED WL SFY+CLIKKYDKE
Sbjct: 154  WYKAAIKADPLCYEALECLIESHMLTCDEESSLLSSLQFGPEDGWLPSFYACLIKKYDKE 213

Query: 186  SMVEAKFRKLEQETCDNNTASLPVACTLKNNTDLLACKAEYYHQSGEYQKCFELTSALLE 365
            +++EA+F++LE+ET ++ ++      TLK NTDLLACKAEYYHQ GEYQKCFELTS LLE
Sbjct: 214  NIIEARFKELERETFNSKSSDPSFMRTLKTNTDLLACKAEYYHQCGEYQKCFELTSVLLE 273

Query: 366  RDPFHLKSTLVHLTAAMELGHSNELYLMACNLVKDYPQKALSWFAVGCYYYCIKKYGESR 545
            +DPFHLKSTLVHL AAMELGHSNELYLMACNLVKDYPQKALSWFAVGCYYYCIKKY +SR
Sbjct: 274  KDPFHLKSTLVHLAAAMELGHSNELYLMACNLVKDYPQKALSWFAVGCYYYCIKKYDQSR 333

Query: 546  RFFSKATTLDGTFLPAWIGHGNAFAAQEEGDQAMSSFRTAARSFPGCHLPTLYIGMEYMR 725
            R+FSKATTLDGTF PAWIG+GNA+AAQEEGDQAMS++RT AR FPGCHLPTLYIGMEYMR
Sbjct: 334  RYFSKATTLDGTFAPAWIGYGNAYAAQEEGDQAMSAYRTGARLFPGCHLPTLYIGMEYMR 393

Query: 726  THNLKLAEKFFMQAKAICPSDPLVYNELGVVAYHMKDYKSAVWWFEKTLSRVPSPLSEIW 905
            TH+ KLAE+FF+QAK ICPSDPLVYNELGVVAY MK+Y  A WWFEKTL+ +PSPLSE+W
Sbjct: 394  THSFKLAEQFFVQAKTICPSDPLVYNELGVVAYDMKEYNKAAWWFEKTLACIPSPLSEMW 453

Query: 906  EPTVVNLAHAMRKLRKYHEAVSYYEKALAISTRSLSTYAGLAYTYHLQDNYDAAITYYHK 1085
            EPTVVNLAH+ RKL+ Y EA+ YYEKALA+STRSLSTYAGLAYT HLQD++ AAITYYHK
Sbjct: 454  EPTVVNLAHSYRKLKMYREAIKYYEKALALSTRSLSTYAGLAYTCHLQDHFTAAITYYHK 513

Query: 1086 ALWLKPDDQFCTDMLTVALVDEC 1154
            ALWLKPDDQFCT+ML++AL+DEC
Sbjct: 514  ALWLKPDDQFCTEMLSLALMDEC 536


>ref|XP_002887756.1| cell division cycle family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297333597|gb|EFH64015.1| cell division cycle family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 543

 Score =  625 bits (1611), Expect = e-176
 Identities = 298/384 (77%), Positives = 333/384 (86%)
 Frame = +3

Query: 3    KWYKAAIKADPLCYEALERLIENHMXXXXXXXXXXXXXXFAPEDKWLSSFYSCLIKKYDK 182
            +WYKAAIKADPLCYEALE LIE+HM              F+PED WLSSFYSCLIKKYDK
Sbjct: 151  QWYKAAIKADPLCYEALECLIESHMLTSEEESSLLSSLQFSPEDGWLSSFYSCLIKKYDK 210

Query: 183  ESMVEAKFRKLEQETCDNNTASLPVACTLKNNTDLLACKAEYYHQSGEYQKCFELTSALL 362
            E+ VE KF+KLE ET  + + S  +  TL NNTDLLACKAEYYHQ  EYQKCFELT+ALL
Sbjct: 211  ENTVELKFKKLENETSGSVSGSSMI--TLANNTDLLACKAEYYHQCCEYQKCFELTAALL 268

Query: 363  ERDPFHLKSTLVHLTAAMELGHSNELYLMACNLVKDYPQKALSWFAVGCYYYCIKKYGES 542
            E+DPFHLK TLVHL AAMELG+SNELYLMACNLVKDYP KALSWFAVGCYYYCIKKY E+
Sbjct: 269  EKDPFHLKCTLVHLAAAMELGNSNELYLMACNLVKDYPSKALSWFAVGCYYYCIKKYAEA 328

Query: 543  RRFFSKATTLDGTFLPAWIGHGNAFAAQEEGDQAMSSFRTAARSFPGCHLPTLYIGMEYM 722
            RR+FSKAT++DG+F PAWIG+GN+FAAQEEGDQAMS++RTAAR FPGCHLPTLYIGMEYM
Sbjct: 329  RRYFSKATSIDGSFSPAWIGYGNSFAAQEEGDQAMSAYRTAARLFPGCHLPTLYIGMEYM 388

Query: 723  RTHNLKLAEKFFMQAKAICPSDPLVYNELGVVAYHMKDYKSAVWWFEKTLSRVPSPLSEI 902
            RTH+ KLA++FFMQAKAICPSDPLVYNELGVVAYHMK+Y  AV WFEKTLS +PS L+E 
Sbjct: 389  RTHSYKLADQFFMQAKAICPSDPLVYNELGVVAYHMKEYGKAVRWFEKTLSHIPSVLTET 448

Query: 903  WEPTVVNLAHAMRKLRKYHEAVSYYEKALAISTRSLSTYAGLAYTYHLQDNYDAAITYYH 1082
            WEPTVVNLAHA RKLRK  EA+SYYE+AL +ST+SLSTY+GL YTYHLQ N+ AAI+YYH
Sbjct: 449  WEPTVVNLAHAYRKLRKDREAISYYERALTLSTKSLSTYSGLGYTYHLQGNFSAAISYYH 508

Query: 1083 KALWLKPDDQFCTDMLTVALVDEC 1154
            KALWLKPDDQFCT+ML VAL+DEC
Sbjct: 509  KALWLKPDDQFCTEMLNVALMDEC 532


>ref|NP_565188.1| anaphase-promoting complex subunit 6 [Arabidopsis thaliana]
            gi|302595634|sp|B3DNN5.1|CDC16_ARATH RecName:
            Full=Anaphase-promoting complex subunit 6; AltName:
            Full=Cell division cycle protein 16 homolog; Short=CDC16
            homolog; AltName: Full=Cyclosome subunit 6; AltName:
            Full=Protein NOMEGA gi|190016006|gb|ACE62891.1| At1g78770
            [Arabidopsis thaliana] gi|332198027|gb|AEE36148.1|
            anaphase-promoting complex subunit 6 [Arabidopsis
            thaliana]
          Length = 543

 Score =  620 bits (1598), Expect = e-175
 Identities = 298/384 (77%), Positives = 332/384 (86%)
 Frame = +3

Query: 3    KWYKAAIKADPLCYEALERLIENHMXXXXXXXXXXXXXXFAPEDKWLSSFYSCLIKKYDK 182
            +WYKAAIKADPLCYEALE LIE+HM              F+PED WLSSFYSCLIKKYDK
Sbjct: 151  QWYKAAIKADPLCYEALECLIESHMLTSEEESSLLSSLQFSPEDGWLSSFYSCLIKKYDK 210

Query: 183  ESMVEAKFRKLEQETCDNNTASLPVACTLKNNTDLLACKAEYYHQSGEYQKCFELTSALL 362
            ES VE KF+KLE ET  + + S  +  TL NNTDLLACKAEYYHQ  EYQKCFELT+ALL
Sbjct: 211  ESTVELKFKKLENETSGSVSGSSMI--TLANNTDLLACKAEYYHQCCEYQKCFELTAALL 268

Query: 363  ERDPFHLKSTLVHLTAAMELGHSNELYLMACNLVKDYPQKALSWFAVGCYYYCIKKYGES 542
            E+DPFHLK TLVHL AAMELG+SNELYLMACNLVKDYP KALSWFAVGCYYYCIKKY E+
Sbjct: 269  EKDPFHLKCTLVHLAAAMELGNSNELYLMACNLVKDYPSKALSWFAVGCYYYCIKKYAEA 328

Query: 543  RRFFSKATTLDGTFLPAWIGHGNAFAAQEEGDQAMSSFRTAARSFPGCHLPTLYIGMEYM 722
            RR+FSKAT +DG+F PA IG+GN+FAAQEEGDQAMS++RTAAR FPGCHLPTLYIGMEYM
Sbjct: 329  RRYFSKATGIDGSFSPARIGYGNSFAAQEEGDQAMSAYRTAARLFPGCHLPTLYIGMEYM 388

Query: 723  RTHNLKLAEKFFMQAKAICPSDPLVYNELGVVAYHMKDYKSAVWWFEKTLSRVPSPLSEI 902
            RTH+ KLA++FFMQAKAICPSDPLVYNELGVVAYHMK+Y  AV WFEKTL+ +PS L+E 
Sbjct: 389  RTHSYKLADQFFMQAKAICPSDPLVYNELGVVAYHMKEYGKAVRWFEKTLAHIPSALTES 448

Query: 903  WEPTVVNLAHAMRKLRKYHEAVSYYEKALAISTRSLSTYAGLAYTYHLQDNYDAAITYYH 1082
            WEPTVVNLAHA RKLRK  EA+SYYE+AL +ST+SLSTY+GLAYTYHLQ N+ AAI+YYH
Sbjct: 449  WEPTVVNLAHAYRKLRKDREAISYYERALTLSTKSLSTYSGLAYTYHLQGNFSAAISYYH 508

Query: 1083 KALWLKPDDQFCTDMLTVALVDEC 1154
            KALWLKPDDQFCT+ML VAL+DEC
Sbjct: 509  KALWLKPDDQFCTEMLNVALMDEC 532


>ref|XP_002523647.1| cell division cycle, putative [Ricinus communis]
            gi|223537099|gb|EEF38733.1| cell division cycle, putative
            [Ricinus communis]
          Length = 655

 Score =  617 bits (1592), Expect = e-174
 Identities = 293/383 (76%), Positives = 334/383 (87%)
 Frame = +3

Query: 3    KWYKAAIKADPLCYEALERLIENHMXXXXXXXXXXXXXXFAPEDKWLSSFYSCLIKKYDK 182
            +WYKAAIKADPL YEALE L+ENHM              F PED+WLS FYSCL+KKYDK
Sbjct: 151  QWYKAAIKADPLGYEALECLVENHMLTCEEETSLLSTLQFGPEDEWLSLFYSCLVKKYDK 210

Query: 183  ESMVEAKFRKLEQETCDNNTASLPVACTLKNNTDLLACKAEYYHQSGEYQKCFELTSALL 362
            ES++EAKF++LE+E+ + N +S     TLK +TDLLACKAEYYHQ GEY KCFELTS LL
Sbjct: 211  ESIIEAKFKELEKESENGNPSSASFMHTLKKDTDLLACKAEYYHQCGEYNKCFELTSILL 270

Query: 363  ERDPFHLKSTLVHLTAAMELGHSNELYLMACNLVKDYPQKALSWFAVGCYYYCIKKYGES 542
            E+DPFHLK TLVHL AAMELG+SNELYLMACNLVKDYPQKALSWFAVGCYY CIKKY ++
Sbjct: 271  EKDPFHLKCTLVHLAAAMELGNSNELYLMACNLVKDYPQKALSWFAVGCYYCCIKKYDQA 330

Query: 543  RRFFSKATTLDGTFLPAWIGHGNAFAAQEEGDQAMSSFRTAARSFPGCHLPTLYIGMEYM 722
            RR+FSKAT+LDGTF PAWIG+GNA+AAQEEGDQAMS++RTAAR FPGCHLPT+YIGMEYM
Sbjct: 331  RRYFSKATSLDGTFAPAWIGYGNAYAAQEEGDQAMSAYRTAARLFPGCHLPTMYIGMEYM 390

Query: 723  RTHNLKLAEKFFMQAKAICPSDPLVYNELGVVAYHMKDYKSAVWWFEKTLSRVPSPLSEI 902
            RTH+ KLAE+FFMQAK ICPSDPLVYNELGVVAY+MK+Y  AV WF+KTL+ VPS LS +
Sbjct: 391  RTHSFKLAEQFFMQAKTICPSDPLVYNELGVVAYNMKEYNKAVLWFDKTLAHVPS-LSSL 449

Query: 903  WEPTVVNLAHAMRKLRKYHEAVSYYEKALAISTRSLSTYAGLAYTYHLQDNYDAAITYYH 1082
            WEPT++NLAHA RKL+ YHEA+S YE+ALA STRSLSTYAGLAYTYHLQDN+ AAIT+YH
Sbjct: 450  WEPTMLNLAHAYRKLKMYHEAISCYERALAFSTRSLSTYAGLAYTYHLQDNFTAAITHYH 509

Query: 1083 KALWLKPDDQFCTDMLTVALVDE 1151
            KALWLKPDDQFCT+ML++ALVDE
Sbjct: 510  KALWLKPDDQFCTEMLSLALVDE 532


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