BLASTX nr result

ID: Coptis25_contig00020644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020644
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302736.1| predicted protein [Populus trichocarpa] gi|2...   210   8e-53
ref|XP_002318969.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-51
ref|XP_002269237.2| PREDICTED: kinesin-4-like [Vitis vinifera]        206   2e-51
emb|CBI36904.3| unnamed protein product [Vitis vinifera]              206   2e-51
ref|XP_003536876.1| PREDICTED: kinesin-4-like [Glycine max]           205   3e-51

>ref|XP_002302736.1| predicted protein [Populus trichocarpa] gi|222844462|gb|EEE82009.1|
           predicted protein [Populus trichocarpa]
          Length = 1003

 Score =  210 bits (535), Expect = 8e-53
 Identities = 108/159 (67%), Positives = 129/159 (81%), Gaps = 1/159 (0%)
 Frame = -2

Query: 478 CNVLNRVQPGAVPKVVESPSDSIVVPDGAALSAYQYFENVRNFLVAVEEMGLPNFEASDL 299
           CN LN+VQPGAVPKVVESP D+ ++PDGAALSA+QYFENVRNFLVAV+EMG+PNFEASDL
Sbjct: 83  CNALNKVQPGAVPKVVESPCDAALIPDGAALSAFQYFENVRNFLVAVQEMGIPNFEASDL 142

Query: 298 EQGGKSARIVNCVLVLKSYSDRKQTGGCGMSRFGGSLKPSNSGKYFTRKNSEPFTNSLAR 119
           EQGGKSAR+VN VL LKSY++ KQTGG G+ +FGG++KP+ S K F RKNSEPF NSL+R
Sbjct: 143 EQGGKSARVVNTVLALKSYNEWKQTGGNGIWKFGGNVKPTVSAKSFVRKNSEPFMNSLSR 202

Query: 118 NASMNEKSFGAELNSNGDLAHDTDM-NNRSLNMLVHTLL 5
           N SMNEKSF      + DL +   M  + SL+MLV  +L
Sbjct: 203 NLSMNEKSFN---TLSSDLENSNKMPGSGSLSMLVRAVL 238


>ref|XP_002318969.1| predicted protein [Populus trichocarpa] gi|222857345|gb|EEE94892.1|
           predicted protein [Populus trichocarpa]
          Length = 981

 Score =  206 bits (524), Expect = 2e-51
 Identities = 107/161 (66%), Positives = 123/161 (76%), Gaps = 2/161 (1%)
 Frame = -2

Query: 478 CNVLNRVQPGAVPKVVESPSDSIVVPDGAALSAYQYFENVRNFLVAVEEMGLPNFEASDL 299
           CNVLN+VQPGAVPKVVE P DS+ VPDGAALSA+QYFENVRNFLVA+EEMG+P FEASDL
Sbjct: 87  CNVLNKVQPGAVPKVVEGPGDSVEVPDGAALSAFQYFENVRNFLVAIEEMGIPTFEASDL 146

Query: 298 EQGGKSARIVNCVLVLKSYSDRKQTGGCGMSRFGGSLKPSNS--GKYFTRKNSEPFTNSL 125
           EQGGKSAR+VNC+L LKSYSD KQ+GG G  ++GG+LKPS S  GK F RKNSEPF NS 
Sbjct: 147 EQGGKSARVVNCILALKSYSDWKQSGGIGTWKYGGNLKPSTSGGGKPFMRKNSEPFKNSF 206

Query: 124 ARNASMNEKSFGAELNSNGDLAHDTDMNNRSLNMLVHTLLS 2
           +R  S +  SF  + N   +        +RSLNMLV   LS
Sbjct: 207 SRACSGDPSSFDEQFNDLSEAG-----ASRSLNMLVRAALS 242


>ref|XP_002269237.2| PREDICTED: kinesin-4-like [Vitis vinifera]
          Length = 1011

 Score =  206 bits (523), Expect = 2e-51
 Identities = 105/158 (66%), Positives = 127/158 (80%)
 Frame = -2

Query: 478 CNVLNRVQPGAVPKVVESPSDSIVVPDGAALSAYQYFENVRNFLVAVEEMGLPNFEASDL 299
           C VLN++QPGAV KVVESP DS ++PDGAALSAYQYFENVRNFLVAV+EMGLP FEASDL
Sbjct: 83  CTVLNKIQPGAVSKVVESPCDSALIPDGAALSAYQYFENVRNFLVAVQEMGLPTFEASDL 142

Query: 298 EQGGKSARIVNCVLVLKSYSDRKQTGGCGMSRFGGSLKPSNSGKYFTRKNSEPFTNSLAR 119
           EQGGKS R+VNCVL LKSYS+ KQTGG G+ +FGG++KP+ +GK F RKNSEPFTNS +R
Sbjct: 143 EQGGKSGRVVNCVLALKSYSEWKQTGGNGIWKFGGNVKPAATGKSFVRKNSEPFTNSFSR 202

Query: 118 NASMNEKSFGAELNSNGDLAHDTDMNNRSLNMLVHTLL 5
           N S +E S  A    + DL  +   ++ SL+MLV ++L
Sbjct: 203 NLSASENSLNA---ISMDLDTNKMPSSGSLSMLVRSIL 237


>emb|CBI36904.3| unnamed protein product [Vitis vinifera]
          Length = 1017

 Score =  206 bits (523), Expect = 2e-51
 Identities = 105/158 (66%), Positives = 127/158 (80%)
 Frame = -2

Query: 478 CNVLNRVQPGAVPKVVESPSDSIVVPDGAALSAYQYFENVRNFLVAVEEMGLPNFEASDL 299
           C VLN++QPGAV KVVESP DS ++PDGAALSAYQYFENVRNFLVAV+EMGLP FEASDL
Sbjct: 83  CTVLNKIQPGAVSKVVESPCDSALIPDGAALSAYQYFENVRNFLVAVQEMGLPTFEASDL 142

Query: 298 EQGGKSARIVNCVLVLKSYSDRKQTGGCGMSRFGGSLKPSNSGKYFTRKNSEPFTNSLAR 119
           EQGGKS R+VNCVL LKSYS+ KQTGG G+ +FGG++KP+ +GK F RKNSEPFTNS +R
Sbjct: 143 EQGGKSGRVVNCVLALKSYSEWKQTGGNGIWKFGGNVKPAATGKSFVRKNSEPFTNSFSR 202

Query: 118 NASMNEKSFGAELNSNGDLAHDTDMNNRSLNMLVHTLL 5
           N S +E S  A    + DL  +   ++ SL+MLV ++L
Sbjct: 203 NLSASENSLNA---ISMDLDTNKMPSSGSLSMLVRSIL 237


>ref|XP_003536876.1| PREDICTED: kinesin-4-like [Glycine max]
          Length = 1010

 Score =  205 bits (522), Expect = 3e-51
 Identities = 106/158 (67%), Positives = 127/158 (80%)
 Frame = -2

Query: 478 CNVLNRVQPGAVPKVVESPSDSIVVPDGAALSAYQYFENVRNFLVAVEEMGLPNFEASDL 299
           CNVLN+VQPGAVPKVVESP+DS +VPDGA LSA+QYFENVRNFLVAV+E+G+P FEASDL
Sbjct: 79  CNVLNKVQPGAVPKVVESPADSALVPDGAPLSAFQYFENVRNFLVAVQEIGVPTFEASDL 138

Query: 298 EQGGKSARIVNCVLVLKSYSDRKQTGGCGMSRFGGSLKPSNSGKYFTRKNSEPFTNSLAR 119
           EQGGKSARIVN VL LKSYS+ KQTGG G+ +FGG++KP+ S K F RK SEPFTNSL+R
Sbjct: 139 EQGGKSARIVNSVLGLKSYSEWKQTGGNGVWKFGGTIKPAISSKSFVRKTSEPFTNSLSR 198

Query: 118 NASMNEKSFGAELNSNGDLAHDTDMNNRSLNMLVHTLL 5
           N+S+NEKS         D+  +    + SL+MLV  +L
Sbjct: 199 NSSINEKSMTV---LTSDVESNKMSGSHSLSMLVRAIL 233


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