BLASTX nr result

ID: Coptis25_contig00020638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020638
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    75   2e-12
ref|XP_003613574.1| hypothetical protein MTR_5g038230 [Medicago ...    68   2e-09
ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_004163127.1| PREDICTED: uncharacterized LOC101210708 [Cuc...    67   3e-09
ref|XP_004149310.1| PREDICTED: uncharacterized protein LOC101210...    67   3e-09

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 75.5 bits (184), Expect(2) = 2e-12
 Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
 Frame = +1

Query: 190  VLDRVDSTAV-DWLNLPDHLLPLIEEKLIGIKDYVRFGAVFKSWRSAYLES*HCXXXXXX 366
            ++ +++ T + DW  +PD  L LI EKL  ++DYVRFG V KSW S + E   C      
Sbjct: 910  IIQKINQTVMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIF-EDKECCCPSSK 968

Query: 367  XXXXXXXXTSGVQTRGLYDLSENRFLDFQVLVPHNRLCCGSSYGWLVMILENYEVRHLNP 546
                        + RG Y     +  + ++     + C GS YGWLV I  + ++  LNP
Sbjct: 969  SPWLMLAEKENSEIRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNP 1028

Query: 547  FLSVDNEIPLPP----PLIAFEFHDERHGVSSCD-YLFKAVVSANPAS 675
               V  +I LP     P +         G  S D +++KAV+S+ P+S
Sbjct: 1029 LTRV--QILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPSS 1074



 Score = 23.1 bits (48), Expect(2) = 2e-12
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 699  IHGGFDRIAFFKPGDKAYTNL 761
            I+  + R+AF KPG + +T L
Sbjct: 1082 IYSDYGRLAFTKPGHQTWTLL 1102


>ref|XP_003613574.1| hypothetical protein MTR_5g038230 [Medicago truncatula]
           gi|355514909|gb|AES96532.1| hypothetical protein
           MTR_5g038230 [Medicago truncatula]
          Length = 355

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 55/177 (31%), Positives = 79/177 (44%), Gaps = 10/177 (5%)
 Frame = +1

Query: 220 DWLNLPDHLLPLIEEKLIGIKDYVRFGAVFKSWRS-AYLES*HCXXXXXXXXXXXXXXTS 396
           DW NL    L +I EKLI   D++ FG+V K+W S A L   H               + 
Sbjct: 4   DWANLDSLALNMIVEKLIEPIDHIWFGSVCKNWHSIANLNHRHDHQFRSNVMPMLTIPSK 63

Query: 397 -GVQTRGLYDLSENRFLDFQVLVPHNRLCCGSSYGWLVMILENYEVRHLNPFLSVDNEIP 573
              + R LY +  NR    +  + +N+ CCGSS+GWL  + E   +  +NPF  V   I 
Sbjct: 64  KSPEKRCLYSIPANRVYPLESTMLNNKRCCGSSHGWLATLDEEDVITWVNPFKDV-APIS 122

Query: 574 LPPPLIAFEFHDERHGVSSCDY-LFKAVVSANPASNPN-------YTIRQSMVGLTA 720
           LPP        D        D+ + K  +S +P ++PN       YT R S+  + A
Sbjct: 123 LPP-------IDNYMVCKDYDFNVHKVTLSVDPITSPNDYVVAGIYTTRSSLAFIKA 172


>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
           gi|223551313|gb|EEF52799.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 402

 Score = 65.9 bits (159), Expect(2) = 3e-09
 Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 15/170 (8%)
 Frame = +1

Query: 223 WLNLPDHLLPLIEEKLIGIKDYVRFGAVFKSWRSAYLES*HCXXXXXXXXXXXXXXTSGV 402
           W  LP  LL +I +K     DY+   AV  SW+SA  +  H                +  
Sbjct: 5   WAELPPELLQVIADKHTNYVDYLVTRAVCGSWQSAIAKRPHNHLLCQLPFLLLPYYQNNP 64

Query: 403 QTRGLYDLSENRFLDFQVLVPHNRLCCGSSYGWLVMILENYEVRHLNPFLSVDNEIP--- 573
             RG Y++S+++    ++   + + CCGSS+GWL+M+ ++  +  LNP      E+P   
Sbjct: 65  DRRGFYNISDDKIYVLELPEAYEKRCCGSSHGWLIMVEDSPSIFLLNPLTRERIELPALS 124

Query: 574 ---LPPPLIAFE---------FHDERHGVSSCDYLFKAVVSANPASNPNY 687
              + P  + FE            E+  +    ++ KA++S++P+ + N+
Sbjct: 125 TFSIFPTDVVFENSRNLNENFIMREKFHIRD-TFIVKAILSSDPSLDTNF 173



 Score = 21.6 bits (44), Expect(2) = 3e-09
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 666 PCIKSELYYQAIHGGFDRIAFFKPGDKAYT 755
           P + +      I+G  + +AF + GD A+T
Sbjct: 167 PSLDTNFMAVVIYGVNENLAFCRSGDAAWT 196


>ref|XP_004163127.1| PREDICTED: uncharacterized LOC101210708 [Cucumis sativus]
          Length = 324

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 50/160 (31%), Positives = 73/160 (45%), Gaps = 6/160 (3%)
 Frame = +1

Query: 220 DWLNLPDHLLPLIEEKLIGIKDYVRFGAVFKSWRSAYLES*H------CXXXXXXXXXXX 381
           DW  L   +L +I  K++ + DY++F +V KSW    L   H                  
Sbjct: 8   DWSTLEYDVLGMILNKMVSLYDYLQFSSVCKSWNFIALRYKHHRSLITSNLPQLPMLIVP 67

Query: 382 XXXTSGVQTRGLYDLSENRFLDFQVLVPHNRLCCGSSYGWLVMILENYEVRHLNPFLSVD 561
               SG Q   LYDL  N       +   N+ CCGSS+GWL+M+ +  ++   NPF    
Sbjct: 68  SEYDSGKQ-HCLYDLINNEIRPVDFVCSFNKRCCGSSFGWLIMLEDTLDITLFNPFNG-- 124

Query: 562 NEIPLPPPLIAFEFHDERHGVSSCDYLFKAVVSANPASNP 681
           N I +PP  I    HDE  G S    + KA+++ +P+  P
Sbjct: 125 NVIHIPPITI----HDE-PGYSPI-AIHKAILTKDPSIYP 158


>ref|XP_004149310.1| PREDICTED: uncharacterized protein LOC101210708 [Cucumis sativus]
          Length = 324

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 50/160 (31%), Positives = 73/160 (45%), Gaps = 6/160 (3%)
 Frame = +1

Query: 220 DWLNLPDHLLPLIEEKLIGIKDYVRFGAVFKSWRSAYLES*H------CXXXXXXXXXXX 381
           DW  L   +L +I  K++ + DY++F +V KSW    L   H                  
Sbjct: 8   DWSTLEYDVLGMILNKMVSLYDYLQFSSVCKSWNFIALRYKHHRSLITSNLPQLPMLIVP 67

Query: 382 XXXTSGVQTRGLYDLSENRFLDFQVLVPHNRLCCGSSYGWLVMILENYEVRHLNPFLSVD 561
               SG Q   LYDL  N       +   N+ CCGSS+GWL+M+ +  ++   NPF    
Sbjct: 68  SEYDSGKQ-HCLYDLINNEIRPVDFVCSFNKRCCGSSFGWLIMLEDTLDITLFNPFNG-- 124

Query: 562 NEIPLPPPLIAFEFHDERHGVSSCDYLFKAVVSANPASNP 681
           N I +PP  I    HDE  G S    + KA+++ +P+  P
Sbjct: 125 NVIHIPPITI----HDE-PGYSPI-AIHKAILTKDPSIYP 158


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