BLASTX nr result

ID: Coptis25_contig00020636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020636
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283370.1| PREDICTED: uncharacterized protein LOC100250...   194   8e-48
ref|XP_002331717.1| predicted protein [Populus trichocarpa] gi|2...   173   2e-41
ref|XP_002524524.1| conserved hypothetical protein [Ricinus comm...   171   7e-41
ref|XP_004146089.1| PREDICTED: uncharacterized protein LOC101202...   164   9e-39
ref|XP_003540498.1| PREDICTED: uncharacterized protein LOC100812...   160   2e-37

>ref|XP_002283370.1| PREDICTED: uncharacterized protein LOC100250468 [Vitis vinifera]
          Length = 524

 Score =  194 bits (493), Expect = 8e-48
 Identities = 109/182 (59%), Positives = 126/182 (69%), Gaps = 5/182 (2%)
 Frame = +1

Query: 1   GNCSLQVYSVQPCIPKDPAALWNSEFVQAEELFNQPSTIDNCLRDNRFCGVSNSFVIRNV 180
           G+CS+QVYSVQ CIPKDPAALWN+EFVQAEELF QP  +DNCLRDNRFCG+SNSFV R  
Sbjct: 91  GHCSVQVYSVQACIPKDPAALWNAEFVQAEELFKQPFAVDNCLRDNRFCGISNSFVKRIA 150

Query: 181 SGTSAGVPPAQSKIGGITASCRSSSAVQTPTVPQ-QKAKVQQSSPKIG-HSPVVATPVIK 354
            G       +Q K  G+    +S SA QT  V Q Q+ KVQQSSPK+   SP V T V K
Sbjct: 151 EGAPVSNVASQPKTTGLLGPSKSISAPQTIAVQQPQERKVQQSSPKVSLQSPSVVTDV-K 209

Query: 355 SESTASGSNAQAH---TNTGKVAALPATKKKPQSEKSSSGAGGSLANMWGRASVKSKPTC 525
            ES  + ++ QA     + GK   LPA KKK Q++K SSG  GSLANMWGRASVKSKP+C
Sbjct: 210 DESNGTRAHDQASKPPADKGKAPPLPANKKKGQNDK-SSGTEGSLANMWGRASVKSKPSC 268

Query: 526 LP 531
            P
Sbjct: 269 AP 270


>ref|XP_002331717.1| predicted protein [Populus trichocarpa] gi|222874323|gb|EEF11454.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  173 bits (438), Expect = 2e-41
 Identities = 98/177 (55%), Positives = 111/177 (62%), Gaps = 3/177 (1%)
 Frame = +1

Query: 1   GNCSLQVYSVQPCIPKDPAALWNSEFVQAEELFNQPSTIDNCLRDNRFCGVSNSFVIRNV 180
           GNCS+QVYSVQ CIPKDPAALWN+EFVQAEELF Q  T+DNCLRDNRFCG+ NSFV  N 
Sbjct: 88  GNCSVQVYSVQACIPKDPAALWNAEFVQAEELFKQSFTVDNCLRDNRFCGILNSFVKYNC 147

Query: 181 SGTSAGVPPAQSKIGGITASCRSSSAVQTPTVPQQKAKVQQSSPKIGHSPVVATPVIKSE 360
            G      PA +K   I          QT T P  K    Q SPK+G         +KSE
Sbjct: 148 DG------PAATKSMEIPV----IQVCQTITAPPSKQTKVQQSPKVGPPSPNLVNSVKSE 197

Query: 361 STASGSNAQAHTNT---GKVAALPATKKKPQSEKSSSGAGGSLANMWGRASVKSKPT 522
              +G    A   T    KV+ LPA KKK QS+K+SSG GGSLAN+WGRAS KSKP+
Sbjct: 198 RNGTGVRDLATKQTVDEEKVSLLPANKKKGQSDKTSSGNGGSLANLWGRASAKSKPS 254


>ref|XP_002524524.1| conserved hypothetical protein [Ricinus communis]
           gi|223536198|gb|EEF37851.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 573

 Score =  171 bits (433), Expect = 7e-41
 Identities = 95/186 (51%), Positives = 116/186 (62%), Gaps = 1/186 (0%)
 Frame = +1

Query: 1   GNCSLQVYSVQPCIPKDPAALWNSEFVQAEELFNQPSTIDNCLRDNRFCGVSNSFVIRNV 180
           GNCS+ VYSVQP IPKDPAALWN EFVQAEELF QP+  DNCLRDNRFCG+ N FV RNV
Sbjct: 88  GNCSIHVYSVQPAIPKDPAALWNDEFVQAEELFRQPNVADNCLRDNRFCGILNPFVKRNV 147

Query: 181 SGTSAGVPPAQSKIGGITASCRSSSAVQTPTVPQQKAKVQQSSPKIGHSPVVATPVIKSE 360
           +G       +Q K  GI    +S+SA +   VP Q+ K +QS P +G    +    IKSE
Sbjct: 148 AGNPVSNAVSQPKSVGIPEPSKSNSAHENIKVPLQQIKDEQSGPMVGKQSTILVKDIKSE 207

Query: 361 S-TASGSNAQAHTNTGKVAALPATKKKPQSEKSSSGAGGSLANMWGRASVKSKPTCLPET 537
           S      +++ H    KV  LP  +KK Q +KSSS    SLAN+WGRAS KSK T   + 
Sbjct: 208 SHETEDQSSKPHACGEKV--LPTNEKKGQGDKSSS----SLANLWGRASAKSKLTSAEDN 261

Query: 538 SKTVTD 555
              V++
Sbjct: 262 KNLVSN 267


>ref|XP_004146089.1| PREDICTED: uncharacterized protein LOC101202933 [Cucumis sativus]
           gi|449518067|ref|XP_004166065.1| PREDICTED:
           uncharacterized protein LOC101228942 [Cucumis sativus]
          Length = 520

 Score =  164 bits (415), Expect = 9e-39
 Identities = 89/174 (51%), Positives = 108/174 (62%), Gaps = 2/174 (1%)
 Frame = +1

Query: 1   GNCSLQVYSVQPCIPKDPAALWNSEFVQAEELFNQPSTIDNCLRDNRFCGVSNSFVIRNV 180
           G CS+QVYSVQ  IPKDPAALWN+EFVQAEELF QP T DNCLRDNRFCG+SNS+V RNV
Sbjct: 91  GTCSIQVYSVQASIPKDPAALWNAEFVQAEELFKQPFTADNCLRDNRFCGISNSYVKRNV 150

Query: 181 SGTSAGVPPAQSKIGGITASCRSSSAVQTPTVPQ-QKAKVQQSSPKIGHSPVVATPVIKS 357
               A V  +Q K      S +  ++ Q  TV Q QK+++ + SP +G         +KS
Sbjct: 151 DEIPASVAASQPKSAVDLESSKKMTSYQNTTVLQPQKSEMPKVSPNVGLQSSTVVKEVKS 210

Query: 358 ESTASGSNAQAHTNT-GKVAALPATKKKPQSEKSSSGAGGSLANMWGRASVKSK 516
           E   +   A        KVA+LP  KKK Q +K+ S  G SLAN+WGR   KSK
Sbjct: 211 EGNRTDHQASKPIAVKEKVASLPTNKKKGQGDKTCSSTGSSLANLWGRVPTKSK 264


>ref|XP_003540498.1| PREDICTED: uncharacterized protein LOC100812372 [Glycine max]
          Length = 518

 Score =  160 bits (404), Expect = 2e-37
 Identities = 91/180 (50%), Positives = 108/180 (60%), Gaps = 7/180 (3%)
 Frame = +1

Query: 1   GNCSLQVYSVQPCIPKDPAALWNSEFVQAEELFNQPSTIDNCLRDNRFCGVSNSFVIRNV 180
           G+CS+Q+YSVQ  IPKDPA LWN+EF+QAEELF QPS++DNCLRDNRFCG+SNSFV RNV
Sbjct: 91  GDCSVQIYSVQASIPKDPAVLWNAEFIQAEELFKQPSSVDNCLRDNRFCGISNSFVQRNV 150

Query: 181 SGTSAGVPPAQSKIGGITASCRSSSAVQTPTVPQQKAKVQQSSPKIGHSPVVATPVIKSE 360
            G +      QSK   +      S  VQ P     K   + S  K+   P      +KSE
Sbjct: 151 DGPTVVFAAPQSK--SVGEGPTKSDIVQQP----PKNISRDSIDKVDTKPQSVVKEVKSE 204

Query: 361 STASGSNAQAHTNTGKVAA-------LPATKKKPQSEKSSSGAGGSLANMWGRASVKSKP 519
           S   G N   H N  K  A       LP  KKK Q++KS S  GGSLA++WGRAS K KP
Sbjct: 205 SNGIG-NTGVHDNMNKPTADKEKAPPLPTGKKKVQADKSGSVNGGSLASLWGRASAKPKP 263


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