BLASTX nr result
ID: Coptis25_contig00020624
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020624 (2547 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002521673.1| pentatricopeptide repeat-containing protein,... 305 5e-80 ref|XP_002265066.1| PREDICTED: uncharacterized protein LOC100260... 296 2e-77 ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|2... 294 9e-77 ref|XP_002303945.1| predicted protein [Populus trichocarpa] gi|2... 293 1e-76 emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera] 293 2e-76 >ref|XP_002521673.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223539064|gb|EEF40660.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 341 Score = 305 bits (780), Expect = 5e-80 Identities = 151/242 (62%), Positives = 189/242 (78%) Frame = +3 Query: 6 IRTFNCVLNILVSAKQFDIIHQVYLGAPRLGLEIDTCCLNILIKGLCESDRLDAAFALLD 185 ++TFN VLN+LVSA+ FD++H++Y AP LG+EID CCLNILIKGLCE+ L+AAF +LD Sbjct: 103 VKTFNLVLNLLVSARIFDVVHEIYEKAPILGVEIDACCLNILIKGLCENGDLEAAFYVLD 162 Query: 186 EFPKLHCEPNVRTYSTLMNFLCKHSRVDEAFELCERMEQAGVDPDTITFNTLISGLCKQG 365 EFPK C+PNVRT+STLM++LC V++AF L +RME G++ DTITFN LISGL K+G Sbjct: 163 EFPKQRCKPNVRTFSTLMHYLCAKGEVNQAFGLLDRMENEGIEVDTITFNILISGLRKRG 222 Query: 366 RVAEGVELLDKMRLKGCEPNPGSYQAVLYGLLDSKKFLEAKCLMDKMISMGVLPSFSSYK 545 R+ EG+ELL KM+LKGCEPN GSYQ VLYGLLD+ KF EAK MD+M+ G PSF SYK Sbjct: 223 RIEEGMELLVKMKLKGCEPNAGSYQEVLYGLLDAGKFSEAKDFMDRMVCEGNGPSFVSYK 282 Query: 546 LVIHGLCNENLLGDVDLVLKKMLRQGFVPRMGMWKKILESMFSEQIISTSVSQCQFSELA 725 +I GLC E L+G+VD VLK+ML+QGFVP+MGMWK I+ SM SE TS+ FS++ Sbjct: 283 KLIDGLCKEKLIGEVDCVLKQMLKQGFVPKMGMWKHIVGSMLSESGDCTSIC---FSQVI 339 Query: 726 KG 731 G Sbjct: 340 GG 341 Score = 79.7 bits (195), Expect = 4e-12 Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 6/221 (2%) Frame = +3 Query: 15 FNCVLNILVSAKQFDIIHQVYLGAPRLGLEIDTCCLNILIKGLCE-----SDRLDAAFAL 179 + V+N L AK FD I + R+ LE N + + + R+ A Sbjct: 33 YTLVINKLAQAKNFDAIEDIM---QRIKLEKSCRLSNGFFYNVIKIYGHLAGRIKVAIDT 89 Query: 180 LDEFPK-LHCEPNVRTYSTLMNFLCKHSRVDEAFELCERMEQAGVDPDTITFNTLISGLC 356 L + P+ +C P+V+T++ ++N L D E+ E+ GV+ D N LI GLC Sbjct: 90 LFDMPRGYNCWPDVKTFNLVLNLLVSARIFDVVHEIYEKAPILGVEIDACCLNILIKGLC 149 Query: 357 KQGRVAEGVELLDKMRLKGCEPNPGSYQAVLYGLLDSKKFLEAKCLMDKMISMGVLPSFS 536 + G + +LD+ + C+PN ++ +++ L + +A L+D+M + G+ Sbjct: 150 ENGDLEAAFYVLDEFPKQRCKPNVRTFSTLMHYLCAKGEVNQAFGLLDRMENEGIEVDTI 209 Query: 537 SYKLVIHGLCNENLLGDVDLVLKKMLRQGFVPRMGMWKKIL 659 ++ ++I GL + + +L KM +G P G ++++L Sbjct: 210 TFNILISGLRKRGRIEEGMELLVKMKLKGCEPNAGSYQEVL 250 >ref|XP_002265066.1| PREDICTED: uncharacterized protein LOC100260942 [Vitis vinifera] Length = 249 Score = 296 bits (757), Expect = 2e-77 Identities = 140/233 (60%), Positives = 179/233 (76%) Frame = -2 Query: 2378 PPPLPQPCSTSTAATEMPLQSPARPQISLREXXXXXXXXXSGRLXXXXXXXXXXFPIITP 2199 PPP P S A + P ++P+ P+++L++ S +L FPII+P Sbjct: 10 PPPPRSPTSQGPAVLD-PEKTPSHPKVALQQPSHKKASLKSTKLFRHFRSVFRSFPIISP 68 Query: 2198 TCKMPVSLPGGRLNDGHIHGGTRMTGTLYGCRKARINLSIQENPRCLPMLVLELAIPTAK 2019 CK+PV L RLND HIHGGTRMTGTL+G RK R++L+IQE+PRC P+ +LE+AIPT+K Sbjct: 69 ACKIPVLLHNSRLNDVHIHGGTRMTGTLFGHRKGRVSLAIQESPRCFPIFLLEMAIPTSK 128 Query: 2018 LLQEMGSGLVRIALECEKHPAERTKLLEEPLWTMYCNGKKTGYGVKRDPNGDDLNTMQLL 1839 LLQE+G GLVRIALECEK P E+ KL++EP+W +YCNG+K GY VKR+ N +DLN MQ+L Sbjct: 129 LLQELGLGLVRIALECEKRPEEKIKLMDEPIWNLYCNGRKMGYAVKREANAEDLNVMQML 188 Query: 1838 HAVSMGAGVLPSDSADMPDGELTYMRAYFERVVGSKDSETFYMMNPDGNSGPE 1680 HAVSMGAGVLPS++ D+PDGELTYMRA+F+RV+GSKDSET+YMMNPD N+GPE Sbjct: 189 HAVSMGAGVLPSEAIDLPDGELTYMRAHFQRVIGSKDSETYYMMNPDSNTGPE 241 >ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|222846179|gb|EEE83726.1| predicted protein [Populus trichocarpa] Length = 326 Score = 294 bits (752), Expect = 9e-77 Identities = 141/211 (66%), Positives = 173/211 (81%) Frame = +3 Query: 6 IRTFNCVLNILVSAKQFDIIHQVYLGAPRLGLEIDTCCLNILIKGLCESDRLDAAFALLD 185 +++FN VLN+LVSAK FD++H+VYL AP LG+EID C LNILIKGLCE+ L+AAF +LD Sbjct: 116 VKSFNLVLNLLVSAKVFDVVHEVYLQAPMLGIEIDVCSLNILIKGLCENGDLEAAFNVLD 175 Query: 186 EFPKLHCEPNVRTYSTLMNFLCKHSRVDEAFELCERMEQAGVDPDTITFNTLISGLCKQG 365 EFPK CEPNVRT+STLM+ LCK +VDEAF L ERME+ G+D DTITFN LISGL KQG Sbjct: 176 EFPKQRCEPNVRTFSTLMHGLCKKGKVDEAFGLLERMEKEGIDADTITFNILISGLRKQG 235 Query: 366 RVAEGVELLDKMRLKGCEPNPGSYQAVLYGLLDSKKFLEAKCLMDKMISMGVLPSFSSYK 545 +V EG+ELL++M +KGCEPN GSYQ +LYGLLD++K++E K M +MI GV PSF SYK Sbjct: 236 KVVEGLELLERMNIKGCEPNAGSYQEILYGLLDAEKYVEGKEFMVRMIGQGVDPSFVSYK 295 Query: 546 LVIHGLCNENLLGDVDLVLKKMLRQGFVPRM 638 ++HGLC E LL D+D VLK+M RQGFVP+M Sbjct: 296 KLVHGLCKERLLRDLDWVLKQMARQGFVPKM 326 Score = 83.6 bits (205), Expect = 2e-13 Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 8/227 (3%) Frame = +3 Query: 24 VLNILVSAKQFDIIHQVYLGAPRLGLEIDTCC------LNILIKGLCE-SDRLDAAFALL 182 V+N L AK FD I + +++D C + +IK + + R+ A L Sbjct: 49 VINKLAQAKNFDAIEDIMQK-----IKLDKSCRLSNDFFHNVIKIYGQLAGRIKKAMETL 103 Query: 183 DEFPK-LHCEPNVRTYSTLMNFLCKHSRVDEAFELCERMEQAGVDPDTITFNTLISGLCK 359 + PK +C PNV++++ ++N L D E+ + G++ D + N LI GLC+ Sbjct: 104 FDMPKGYNCWPNVKSFNLVLNLLVSAKVFDVVHEVYLQAPMLGIEIDVCSLNILIKGLCE 163 Query: 360 QGRVAEGVELLDKMRLKGCEPNPGSYQAVLYGLLDSKKFLEAKCLMDKMISMGVLPSFSS 539 G + +LD+ + CEPN ++ +++GL K EA L+++M G+ + Sbjct: 164 NGDLEAAFNVLDEFPKQRCEPNVRTFSTLMHGLCKKGKVDEAFGLLERMEKEGIDADTIT 223 Query: 540 YKLVIHGLCNENLLGDVDLVLKKMLRQGFVPRMGMWKKILESMFSEQ 680 + ++I GL + + + +L++M +G P G +++IL + + Sbjct: 224 FNILISGLRKQGKVVEGLELLERMNIKGCEPNAGSYQEILYGLLDAE 270 >ref|XP_002303945.1| predicted protein [Populus trichocarpa] gi|222841377|gb|EEE78924.1| predicted protein [Populus trichocarpa] Length = 261 Score = 293 bits (751), Expect = 1e-76 Identities = 149/248 (60%), Positives = 182/248 (73%), Gaps = 2/248 (0%) Frame = -2 Query: 2417 SLKDIQSFEYMGSPPPLPQPCSTSTAATEMPLQSPARPQISLREXXXXXXXXXSGRLXXX 2238 SLK +Q+ SP P P +T + SP RP ISL++ ++ Sbjct: 10 SLKPVQTRSQ--SPSTFPSPPTTPSGKVNP--MSPVRPTISLQQPNSKKGSSKHNKIFRR 65 Query: 2237 XXXXXXXFPIITPTCKMPVSLPGGRLNDGHIHGGTRMTGTLYGCRKARINLSIQENPRCL 2058 FPII P CK+PVSL G RL+DGH+HGGTRMTGTL+G RKARINL+IQE+P L Sbjct: 66 VRAVFRSFPIIAPACKIPVSLHGNRLHDGHVHGGTRMTGTLFGHRKARINLAIQESPGSL 125 Query: 2057 PMLVLELAIPTAKLLQEMGSGLVRIALECEKHPAERTKLLEEPLWTMYCNGKKTGYGVKR 1878 P+L+LEL IPT KLLQ+MG GLVRIALECEK P E+TK+ +EP+WTM+CNG+K+GY VKR Sbjct: 126 PVLLLELTIPTGKLLQDMGVGLVRIALECEKKPHEKTKIEDEPIWTMFCNGRKSGYAVKR 185 Query: 1877 DPNGDDLNTMQLLHAVSMGAGVLPS-DSADMP-DGELTYMRAYFERVVGSKDSETFYMMN 1704 +P +DLN MQ+LH VSMGAGV+P+ D AD P DGELTYMRA+FERV GSKDSET+YM+N Sbjct: 186 EPTDEDLNVMQILHVVSMGAGVIPTGDGADQPADGELTYMRAFFERVAGSKDSETYYMLN 245 Query: 1703 PDGNSGPE 1680 PDGN+GPE Sbjct: 246 PDGNNGPE 253 >emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera] Length = 393 Score = 293 bits (750), Expect = 2e-76 Identities = 140/234 (59%), Positives = 181/234 (77%) Frame = +3 Query: 3 TIRTFNCVLNILVSAKQFDIIHQVYLGAPRLGLEIDTCCLNILIKGLCESDRLDAAFALL 182 +++TFN VLN+LVSAK+FD++H+VY GAP LG+EID CCLNIL+KGLC S +DAA LL Sbjct: 156 SVKTFNLVLNMLVSAKRFDVVHKVYAGAPELGVEIDACCLNILVKGLCRSGNVDAACELL 215 Query: 183 DEFPKLHCEPNVRTYSTLMNFLCKHSRVDEAFELCERMEQAGVDPDTITFNTLISGLCKQ 362 DE+PK C PNVRT+STLM+ LC+ RV+ A L ERME+ GV PDT+ FN LISGL K+ Sbjct: 216 DEYPKQRCRPNVRTFSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGLRKR 275 Query: 363 GRVAEGVELLDKMRLKGCEPNPGSYQAVLYGLLDSKKFLEAKCLMDKMISMGVLPSFSSY 542 GRV EG+ELL +M+LKGC PN GSYQ VLYG+LD+ +F +AK M +MI GV PSF SY Sbjct: 276 GRVEEGMELLGRMKLKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSY 335 Query: 543 KLVIHGLCNENLLGDVDLVLKKMLRQGFVPRMGMWKKILESMFSEQIISTSVSQ 704 K+VI+GLC ENL+ DV +LK+M+ QGFVP MW++IL++MF + + + + Sbjct: 336 KMVIYGLCKENLVADVVWILKQMVEQGFVPERWMWRRILQTMFPRNVSQSEIME 389