BLASTX nr result

ID: Coptis25_contig00020621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020621
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543651.1| PREDICTED: coatomer subunit beta'-2-like [Gl...    95   5e-18
ref|XP_002284773.2| PREDICTED: coatomer subunit beta'-2-like [Vi...    94   9e-18
emb|CBI36167.3| unnamed protein product [Vitis vinifera]               94   9e-18
emb|CAN59846.1| hypothetical protein VITISV_004513 [Vitis vinifera]    94   9e-18
ref|XP_003546331.1| PREDICTED: coatomer subunit beta'-2-like [Gl...    94   1e-17

>ref|XP_003543651.1| PREDICTED: coatomer subunit beta'-2-like [Glycine max]
          Length = 916

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 53/87 (60%), Positives = 59/87 (67%)
 Frame = +1

Query: 1   VTTMFHLDRPMYLLGYLANQSCVYLLNKEFK*VFSL*FPGGCKFSYRLLRT*IISCCSVM 180
           VTTMFHLDRPMYLLGYLANQS VYL++KEF                           +VM
Sbjct: 552 VTTMFHLDRPMYLLGYLANQSRVYLIDKEF---------------------------NVM 584

Query: 181 GYTLLLSLIEYKTLVIRGDIEQANEIL 261
           GYTLLLSLIEYKTLV+RGD+E+ANEIL
Sbjct: 585 GYTLLLSLIEYKTLVMRGDLERANEIL 611


>ref|XP_002284773.2| PREDICTED: coatomer subunit beta'-2-like [Vitis vinifera]
          Length = 952

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/87 (59%), Positives = 59/87 (67%)
 Frame = +1

Query: 1   VTTMFHLDRPMYLLGYLANQSCVYLLNKEFK*VFSL*FPGGCKFSYRLLRT*IISCCSVM 180
           VTTMFHLDRPMYLLGYLANQS VYL++KEF                           +VM
Sbjct: 600 VTTMFHLDRPMYLLGYLANQSRVYLIDKEF---------------------------NVM 632

Query: 181 GYTLLLSLIEYKTLVIRGDIEQANEIL 261
           GYTLLLSLIEYKTLV+RGD+E+ANE+L
Sbjct: 633 GYTLLLSLIEYKTLVMRGDLERANELL 659


>emb|CBI36167.3| unnamed protein product [Vitis vinifera]
          Length = 933

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/87 (59%), Positives = 59/87 (67%)
 Frame = +1

Query: 1   VTTMFHLDRPMYLLGYLANQSCVYLLNKEFK*VFSL*FPGGCKFSYRLLRT*IISCCSVM 180
           VTTMFHLDRPMYLLGYLANQS VYL++KEF                           +VM
Sbjct: 577 VTTMFHLDRPMYLLGYLANQSRVYLIDKEF---------------------------NVM 609

Query: 181 GYTLLLSLIEYKTLVIRGDIEQANEIL 261
           GYTLLLSLIEYKTLV+RGD+E+ANE+L
Sbjct: 610 GYTLLLSLIEYKTLVMRGDLERANELL 636


>emb|CAN59846.1| hypothetical protein VITISV_004513 [Vitis vinifera]
          Length = 901

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/87 (59%), Positives = 59/87 (67%)
 Frame = +1

Query: 1   VTTMFHLDRPMYLLGYLANQSCVYLLNKEFK*VFSL*FPGGCKFSYRLLRT*IISCCSVM 180
           VTTMFHLDRPMYLLGYLANQS VYL++KEF                           +VM
Sbjct: 545 VTTMFHLDRPMYLLGYLANQSRVYLIDKEF---------------------------NVM 577

Query: 181 GYTLLLSLIEYKTLVIRGDIEQANEIL 261
           GYTLLLSLIEYKTLV+RGD+E+ANE+L
Sbjct: 578 GYTLLLSLIEYKTLVMRGDLERANELL 604


>ref|XP_003546331.1| PREDICTED: coatomer subunit beta'-2-like [Glycine max]
          Length = 920

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/87 (59%), Positives = 59/87 (67%)
 Frame = +1

Query: 1   VTTMFHLDRPMYLLGYLANQSCVYLLNKEFK*VFSL*FPGGCKFSYRLLRT*IISCCSVM 180
           VTTMFHLDRPMYLLGYLANQS VYL++KEF                           +VM
Sbjct: 552 VTTMFHLDRPMYLLGYLANQSRVYLIDKEF---------------------------NVM 584

Query: 181 GYTLLLSLIEYKTLVIRGDIEQANEIL 261
           GYTLLLSLIEYKTLV+RGD+E+AN+IL
Sbjct: 585 GYTLLLSLIEYKTLVMRGDLERANDIL 611


Top