BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020596
         (1405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517391.1| PREDICTED: protein Dom3z homolog, chloroplas...   619   e-175
ref|XP_002516686.1| Protein dom-3, putative [Ricinus communis] g...   616   e-174
ref|XP_004148366.1| PREDICTED: protein Dom3z homolog, chloroplas...   611   e-172
ref|XP_003539118.1| PREDICTED: protein Dom3z homolog, chloroplas...   611   e-172
ref|XP_002326485.1| predicted protein [Populus trichocarpa] gi|2...   602   e-169

>ref|XP_003517391.1| PREDICTED: protein Dom3z homolog, chloroplastic-like [Glycine max]
          Length = 507

 Score =  619 bits (1595), Expect = e-175
 Identities = 297/364 (81%), Positives = 327/364 (89%), Gaps = 1/364 (0%)
 Frame = +2

Query: 317  RDLFGSDNEDYVNTPSVSPIPVPTLPPIRNTNHQTRGNFGRGRWQSGFQNGRGNGLLPRP 496
            +DLFGSDNEDY  T + SP P+P LP  RN N+Q RG FGRGRWQ    N RG GLLPRP
Sbjct: 92   KDLFGSDNEDYCKTLARSPYPIPVLPATRNVNNQGRGGFGRGRWQ----NDRGAGLLPRP 147

Query: 497  AHFNQRQNYGYG-RYSNVRQDERFVSEMKFLKTEETLSRKCIAFQEPCEVACYSRVEDGD 673
              + QRQN+GYG R+ N R DERFVSE+K  K+EETLSRKCIAFQEPCEVACYSRVE G+
Sbjct: 148  GPYPQRQNFGYGNRFQNGRHDERFVSELKLSKSEETLSRKCIAFQEPCEVACYSRVEGGE 207

Query: 674  VYFDDRSLRLFKRLISEDVGADLNEGFETFIAKRDLASEGFGNLLASIRNKNIPLQNIHF 853
            VYFDDRSLRLFKR I+EDVGADLNEG++T+I K+DL SEGFG+LLA IR+KNIPLQNIHF
Sbjct: 208  VYFDDRSLRLFKRHITEDVGADLNEGYDTYIPKKDLGSEGFGDLLACIRDKNIPLQNIHF 267

Query: 854  VTFRNNLNKILATAYIRNEPWEMGVHKRNGVVYLDVHKLPERPQSELDRRRCYWGYCFEN 1033
            VTFRNNLNKILATAYIR+EPWEMGVHKRNGVVYLDVHKLPERPQS+LDRRRCY GYCFE+
Sbjct: 268  VTFRNNLNKILATAYIRHEPWEMGVHKRNGVVYLDVHKLPERPQSDLDRRRCYVGYCFES 327

Query: 1034 LATEDSARADGEGIHHIDANVEFCSVIKTKLGAHRIIMGAEMDCCDSTDDGRRFYVELKT 1213
            LATED  RADGEGIHH+DAN EFC+VIKTKLGAHRI+MGAEMDCCDST++G+RFYVELKT
Sbjct: 328  LATEDPNRADGEGIHHVDANAEFCAVIKTKLGAHRILMGAEMDCCDSTNEGKRFYVELKT 387

Query: 1214 SRELDYHTEERFEREKLLKFWIQSFLAGVPYIVVGFRDDAGRLVRTERLKTKDITHRVKL 1393
            S EL+YHTEERFEREKLLKFWIQSFLAGVPYIV+GFRDDAGRLVRTERL+TKDIT RVK+
Sbjct: 388  SCELNYHTEERFEREKLLKFWIQSFLAGVPYIVIGFRDDAGRLVRTERLRTKDITQRVKM 447

Query: 1394 KNYW 1405
            KNYW
Sbjct: 448  KNYW 451


>ref|XP_002516686.1| Protein dom-3, putative [Ricinus communis]
            gi|223544181|gb|EEF45705.1| Protein dom-3, putative
            [Ricinus communis]
          Length = 528

 Score =  616 bits (1589), Expect = e-174
 Identities = 294/364 (80%), Positives = 325/364 (89%), Gaps = 1/364 (0%)
 Frame = +2

Query: 317  RDLFGSDNEDYVNTPSVSPIPVPTLPPIRNTNHQTRGNFGRGRWQSGFQNGRGNGLLPRP 496
            RDLFGSDNEDYV TP++S   +P LP IRN ++  RGNFGRGRWQ    N RG GLLPRP
Sbjct: 114  RDLFGSDNEDYVKTPAISRFSIPVLPVIRNVHNPGRGNFGRGRWQ----NDRGAGLLPRP 169

Query: 497  AHFNQRQNYGYG-RYSNVRQDERFVSEMKFLKTEETLSRKCIAFQEPCEVACYSRVEDGD 673
              F  RQ YGYG ++SN  +DERFVSE+KFLK+EETLSRK +AFQ PCE+ CYSR E G+
Sbjct: 170  G-FPPRQGYGYGSKFSNGHRDERFVSELKFLKSEETLSRKAVAFQAPCELGCYSRAEGGE 228

Query: 674  VYFDDRSLRLFKRLISEDVGADLNEGFETFIAKRDLASEGFGNLLASIRNKNIPLQNIHF 853
            VYFDDR+LRLFKR ISED+GADLNEGF+TF  K+DL SEGFG+LL  IR+KNIPLQN+HF
Sbjct: 229  VYFDDRTLRLFKRYISEDIGADLNEGFDTFTEKKDLGSEGFGDLLGCIRDKNIPLQNMHF 288

Query: 854  VTFRNNLNKILATAYIRNEPWEMGVHKRNGVVYLDVHKLPERPQSELDRRRCYWGYCFEN 1033
            VTFRNNLNKIL TAYIR+EPWEMGVHKRNGVVYLDVHKLPERP+SEL+RRRCYWGYCFE+
Sbjct: 289  VTFRNNLNKILVTAYIRHEPWEMGVHKRNGVVYLDVHKLPERPKSELERRRCYWGYCFES 348

Query: 1034 LATEDSARADGEGIHHIDANVEFCSVIKTKLGAHRIIMGAEMDCCDSTDDGRRFYVELKT 1213
            LATED  RADGEGIHH+DANVE+CSV+KTKLGAHRI+MGAEMDCCDSTDDG+RFYVELKT
Sbjct: 349  LATEDPKRADGEGIHHVDANVEYCSVLKTKLGAHRILMGAEMDCCDSTDDGKRFYVELKT 408

Query: 1214 SRELDYHTEERFEREKLLKFWIQSFLAGVPYIVVGFRDDAGRLVRTERLKTKDITHRVKL 1393
            SRELDYHTEERFEREKLLKFWIQSFLAGVPYIV+GFRDDAGRLVRTERL TKDIT+RVK 
Sbjct: 409  SRELDYHTEERFEREKLLKFWIQSFLAGVPYIVIGFRDDAGRLVRTERLTTKDITNRVKA 468

Query: 1394 KNYW 1405
            KNYW
Sbjct: 469  KNYW 472


>ref|XP_004148366.1| PREDICTED: protein Dom3z homolog, chloroplastic-like [Cucumis
            sativus] gi|449505239|ref|XP_004162413.1| PREDICTED:
            protein Dom3z homolog, chloroplastic-like [Cucumis
            sativus]
          Length = 519

 Score =  611 bits (1576), Expect = e-172
 Identities = 293/366 (80%), Positives = 325/366 (88%), Gaps = 3/366 (0%)
 Frame = +2

Query: 317  RDLFGSDNEDYVNTPSVSPIPVPTLPPIRNTNHQTRGNFGRGRWQSGFQNGRGNGLLPRP 496
            RDLFGSDNEDY  T +VSP  VP LP IRN NH  RG FGRGRW  G QN RG+GLLPRP
Sbjct: 100  RDLFGSDNEDYCKTLAVSPFSVPVLPAIRNNNHHARGTFGRGRW--GNQNDRGSGLLPRP 157

Query: 497  AHFNQRQNYG-YG-RYSNVRQ-DERFVSEMKFLKTEETLSRKCIAFQEPCEVACYSRVED 667
              + QR  +G YG ++SN R  DERFVS+MK  K+EETL+RKCI FQEPCE+ACYSRVE 
Sbjct: 158  GPYPQRHGFGGYGSKFSNGRHHDERFVSDMKLTKSEETLARKCITFQEPCELACYSRVEG 217

Query: 668  GDVYFDDRSLRLFKRLISEDVGADLNEGFETFIAKRDLASEGFGNLLASIRNKNIPLQNI 847
            GDVYFDDRSLRLFKR I+ED+GADLNEGF+TFI K+DL S+GFG+LL  IR+KNIPLQNI
Sbjct: 218  GDVYFDDRSLRLFKRFITEDIGADLNEGFDTFIEKKDLGSQGFGDLLGCIRDKNIPLQNI 277

Query: 848  HFVTFRNNLNKILATAYIRNEPWEMGVHKRNGVVYLDVHKLPERPQSELDRRRCYWGYCF 1027
            HFVTFRNNLNKILATAYIR+EPWEMGVHKRNGVVYLDVHKLPERPQSE++RRRCYWGYCF
Sbjct: 278  HFVTFRNNLNKILATAYIRHEPWEMGVHKRNGVVYLDVHKLPERPQSEMERRRCYWGYCF 337

Query: 1028 ENLATEDSARADGEGIHHIDANVEFCSVIKTKLGAHRIIMGAEMDCCDSTDDGRRFYVEL 1207
            ENLATED  R +GEGIHH+DAN E+C+VIKTKLGAHRI+MGAEMDCCDSTD+GRRFYVEL
Sbjct: 338  ENLATEDPRRGNGEGIHHVDANAEYCAVIKTKLGAHRILMGAEMDCCDSTDEGRRFYVEL 397

Query: 1208 KTSRELDYHTEERFEREKLLKFWIQSFLAGVPYIVVGFRDDAGRLVRTERLKTKDITHRV 1387
            KTSRELD  TEER+EREKLLKFWIQSFLAGVPYIV+GFR+DAG+LVRTERL+TKDIT RV
Sbjct: 398  KTSRELDQRTEERYEREKLLKFWIQSFLAGVPYIVIGFRNDAGQLVRTERLRTKDITQRV 457

Query: 1388 KLKNYW 1405
            K+KNYW
Sbjct: 458  KMKNYW 463


>ref|XP_003539118.1| PREDICTED: protein Dom3z homolog, chloroplastic-like isoform 1
            [Glycine max]
          Length = 507

 Score =  611 bits (1576), Expect = e-172
 Identities = 293/364 (80%), Positives = 327/364 (89%), Gaps = 1/364 (0%)
 Frame = +2

Query: 317  RDLFGSDNEDYVNTPSVSPIPVPTLPPIRNTNHQTRGNFGRGRWQSGFQNGRGNGLLPRP 496
            +DLFGSDNEDY  T + SP P+P LP IRN ++Q RG FGRGRWQ    N RG GLLPRP
Sbjct: 92   KDLFGSDNEDYCKTLARSPYPIPVLPAIRNVHNQGRGGFGRGRWQ----NDRGAGLLPRP 147

Query: 497  AHFNQRQNYGYG-RYSNVRQDERFVSEMKFLKTEETLSRKCIAFQEPCEVACYSRVEDGD 673
              + QRQN+GYG R+ + R DERFVSE+K  K+EETLSRKCIAFQEPCEVACYSR E  +
Sbjct: 148  GPYPQRQNFGYGNRFQDGRHDERFVSELKLSKSEETLSRKCIAFQEPCEVACYSRAEGRE 207

Query: 674  VYFDDRSLRLFKRLISEDVGADLNEGFETFIAKRDLASEGFGNLLASIRNKNIPLQNIHF 853
            VYFDDRSLRLFKR I+EDVGADLNEG++T+I K+DL S+GFG+LLA IR+KNIPLQNIHF
Sbjct: 208  VYFDDRSLRLFKRHITEDVGADLNEGYDTYIPKKDLGSQGFGDLLACIRDKNIPLQNIHF 267

Query: 854  VTFRNNLNKILATAYIRNEPWEMGVHKRNGVVYLDVHKLPERPQSELDRRRCYWGYCFEN 1033
            VTFRNNLNKILATAYIR+EPWEMGVHKRNGVVYLDVHKLPE+PQS+LDRRRCY GYCFE+
Sbjct: 268  VTFRNNLNKILATAYIRHEPWEMGVHKRNGVVYLDVHKLPEKPQSDLDRRRCYVGYCFES 327

Query: 1034 LATEDSARADGEGIHHIDANVEFCSVIKTKLGAHRIIMGAEMDCCDSTDDGRRFYVELKT 1213
            LATED  RADGEGIHH+DANVEFC+VIKTKLGAHRI+MGAEMDCCDST++G+RFYVELKT
Sbjct: 328  LATEDPNRADGEGIHHVDANVEFCAVIKTKLGAHRILMGAEMDCCDSTNEGKRFYVELKT 387

Query: 1214 SRELDYHTEERFEREKLLKFWIQSFLAGVPYIVVGFRDDAGRLVRTERLKTKDITHRVKL 1393
            S EL+YHTEERFEREKLLKFWIQSFLAGVPYIV+GFRDDAGRLVRTERL+TKDIT RVK+
Sbjct: 388  SCELNYHTEERFEREKLLKFWIQSFLAGVPYIVIGFRDDAGRLVRTERLRTKDITQRVKM 447

Query: 1394 KNYW 1405
            KNYW
Sbjct: 448  KNYW 451


>ref|XP_002326485.1| predicted protein [Populus trichocarpa] gi|222833807|gb|EEE72284.1|
            predicted protein [Populus trichocarpa]
          Length = 532

 Score =  602 bits (1551), Expect = e-169
 Identities = 288/365 (78%), Positives = 326/365 (89%), Gaps = 2/365 (0%)
 Frame = +2

Query: 317  RDLFGSDNEDYVNTPSVSPIPVPTLPPIRNTNHQTRGNFGRGRWQSGFQNGRGNGLLPRP 496
            RDLFGSDNEDYV T  +SP P+P LP +R+ ++  RGNFGRGRW     N RG GLLPRP
Sbjct: 117  RDLFGSDNEDYVKTTVISPHPIPVLPAMRHPHNPGRGNFGRGRWH----NNRGAGLLPRP 172

Query: 497  AHFNQRQNYGYG-RYSNVRQDERFVSEMKFLKTEETLSRKCIAFQEPCEVACYSRVEDGD 673
              F  RQ YGYG +++N  +DERFVSE+KF K++ETLSRKC+AFQEPCE+ACYSR+E G+
Sbjct: 173  G-FPPRQGYGYGSKFANGHRDERFVSELKFSKSDETLSRKCVAFQEPCELACYSRIEGGE 231

Query: 674  VYFDDRSLRLFKRLISEDVGADLNEGFETFIAKRDLASEGFGNLLASIRNKNIPLQNIHF 853
            VYFDDRSLRLFKRLISEDVGADLNEGF+TFI KRDL S+GFG+LLA IR+KNIPLQN+HF
Sbjct: 232  VYFDDRSLRLFKRLISEDVGADLNEGFDTFIEKRDLGSQGFGDLLACIRDKNIPLQNMHF 291

Query: 854  VTFRNNLNKILATAYIRNEPWEMGVHKRNGVVYLDVHKLPERPQSELDRRRCYWGYCFEN 1033
            VTFRNNLNKILATAY+R+E WEMGVHKRNGVVYLDVHKLPERPQSEL+RRRCYWGYCFE+
Sbjct: 292  VTFRNNLNKILATAYMRHEHWEMGVHKRNGVVYLDVHKLPERPQSELERRRCYWGYCFES 351

Query: 1034 LATEDSARADGEGIHHIDANVEFCSVIKTKLGAHRIIMGAEMDCCDSTDDGRRFYVELKT 1213
            LATED  RA+GE IHH+D+NVE+CSVIKTKLGAHRI+MGAEMDCCDSTD GRRFYVELKT
Sbjct: 352  LATEDPRRANGEAIHHVDSNVEYCSVIKTKLGAHRILMGAEMDCCDSTDSGRRFYVELKT 411

Query: 1214 SRELD-YHTEERFEREKLLKFWIQSFLAGVPYIVVGFRDDAGRLVRTERLKTKDITHRVK 1390
            +RE+D YH EERFE+EKLLK WIQ+FLAGVPYIV+G+RDDAGRLVRTERL TKDIT RVK
Sbjct: 412  NREIDNYHQEERFEKEKLLKCWIQAFLAGVPYIVIGYRDDAGRLVRTERLTTKDITQRVK 471

Query: 1391 LKNYW 1405
            +KNYW
Sbjct: 472  MKNYW 476