BLASTX nr result

ID: Coptis25_contig00020575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020575
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78375.1| hypothetical protein VITISV_000698 [Vitis vinifera]    94   1e-17
ref|XP_002267754.2| PREDICTED: 2-oxoglutarate/malate translocato...    94   1e-17
gb|AAM89397.1| glutamate/malate translocator [Nicotiana tabacum]       93   2e-17
ref|XP_004137158.1| PREDICTED: dicarboxylate transporter 2.1, ch...    92   6e-17
ref|XP_002460379.1| hypothetical protein SORBIDRAFT_02g027290 [S...    91   1e-16

>emb|CAN78375.1| hypothetical protein VITISV_000698 [Vitis vinifera]
          Length = 564

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 70/185 (37%), Positives = 91/185 (49%), Gaps = 9/185 (4%)
 Frame = -1

Query: 529 QSFTLYTSPSTSLISYTRHISLSKRTXXXXXXXXXXXXXXXI-NGLNCFSSSPTNLFGST 353
           +SF LYTS S+   S +  +SL +R+                   L+   S P+ L    
Sbjct: 2   ESFVLYTSSSS--FSPSSRLSLLRRSPPSLKSPPSIFPSSASPRXLSNLRSPPSRLLPP- 58

Query: 352 HNFSLLKTKAHISPK----PIQSSSQNANP----KKQGAKXXXXXXXXXXXXXIRFIVPK 197
              +L K+K    P+    PIQ+S     P      +GAK             +RF+VPK
Sbjct: 59  --LALFKSKPSPKPRTFLHPIQASPSPPPPPVEESPKGAKLIPFIISISIGLIVRFLVPK 116

Query: 196 PIQVSTQAWQLLAIFLSTNIGLILGPLPIGAWAXXXXXXXXXXXXXXFENAFKGFTSDVI 17
           P+QVS QAWQLLAIFLST  GL+L PLP+GAWA              F  AF  FT++VI
Sbjct: 117 PVQVSMQAWQLLAIFLSTVAGLVLNPLPVGAWAFLGLXTSILTNTLSFSTAFGAFTNEVI 176

Query: 16  WLIVL 2
           WLIV+
Sbjct: 177 WLIVI 181


>ref|XP_002267754.2| PREDICTED: 2-oxoglutarate/malate translocator, chloroplastic-like
           [Vitis vinifera]
          Length = 564

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 69/185 (37%), Positives = 90/185 (48%), Gaps = 9/185 (4%)
 Frame = -1

Query: 529 QSFTLYTSPSTSLISYTRHISLSKRTXXXXXXXXXXXXXXXI-NGLNCFSSSPTNLFGST 353
           +SF LYTS S+   S +  +SL +R+                   L+   S P+ L    
Sbjct: 2   ESFVLYTSSSS--FSPSSRLSLLRRSPPSLKSPPSIFPSSASPRRLSNLRSPPSRLLPP- 58

Query: 352 HNFSLLKTKAHISPK----PIQSSSQNANP----KKQGAKXXXXXXXXXXXXXIRFIVPK 197
              +L K+K    P+    PIQ+S     P      +GAK             +RF+VPK
Sbjct: 59  --LALFKSKPSPKPRTFLHPIQASPSPPPPPVEESPKGAKLIPFIISISIGLIVRFLVPK 116

Query: 196 PIQVSTQAWQLLAIFLSTNIGLILGPLPIGAWAXXXXXXXXXXXXXXFENAFKGFTSDVI 17
           P+QVS QAWQLLAIFLST  GL+L PLP+GAWA              F  AF  FT++VI
Sbjct: 117 PVQVSMQAWQLLAIFLSTVAGLVLNPLPVGAWAFLGLTTSILTNTLSFSTAFGAFTNEVI 176

Query: 16  WLIVL 2
           WLIV+
Sbjct: 177 WLIVI 181


>gb|AAM89397.1| glutamate/malate translocator [Nicotiana tabacum]
          Length = 583

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 55/127 (43%), Positives = 68/127 (53%)
 Frame = -1

Query: 382 SSPTNLFGSTHNFSLLKTKAHISPKPIQSSSQNANPKKQGAKXXXXXXXXXXXXXIRFIV 203
           S PT+    +H        A  SP P +  + +A PK QGAK             +RF V
Sbjct: 78  SKPTSKNSPSHK----PINASSSPDPDKVVTIDAKPKPQGAKLIPLIISVSIGLIVRFFV 133

Query: 202 PKPIQVSTQAWQLLAIFLSTNIGLILGPLPIGAWAXXXXXXXXXXXXXXFENAFKGFTSD 23
           PKP +VS QAWQLL+IFLST  GL+L PLP+GAWA              F  AF  FT++
Sbjct: 134 PKPPEVSPQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTTSVLTKTLTFTAAFNAFTNE 193

Query: 22  VIWLIVL 2
           VIWLIV+
Sbjct: 194 VIWLIVI 200


>ref|XP_004137158.1| PREDICTED: dicarboxylate transporter 2.1, chloroplastic-like
           [Cucumis sativus]
          Length = 577

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 58/136 (42%), Positives = 73/136 (53%), Gaps = 7/136 (5%)
 Frame = -1

Query: 388 FSSSPTNLFGSTHNFSL-----LKTKAHISP--KPIQSSSQNANPKKQGAKXXXXXXXXX 230
           F SS  +LF    N  L     ++T A  SP  +P+  S     P +QGAK         
Sbjct: 63  FLSSRLSLFNPLFNPKLRQPFPMRTSASQSPDNQPVPPSP----PPRQGAKPIPFLISIA 118

Query: 229 XXXXIRFIVPKPIQVSTQAWQLLAIFLSTNIGLILGPLPIGAWAXXXXXXXXXXXXXXFE 50
               +RF VPKP++VS +AWQLL+IFLST  GL+L PLP+GAWA              F 
Sbjct: 119 IGLIVRFAVPKPVEVSAEAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTVTVVTKTLTFA 178

Query: 49  NAFKGFTSDVIWLIVL 2
            AF  FTS+VIWLIV+
Sbjct: 179 AAFNAFTSEVIWLIVI 194


>ref|XP_002460379.1| hypothetical protein SORBIDRAFT_02g027290 [Sorghum bicolor]
           gi|241923756|gb|EER96900.1| hypothetical protein
           SORBIDRAFT_02g027290 [Sorghum bicolor]
          Length = 557

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 53/135 (39%), Positives = 73/135 (54%), Gaps = 9/135 (6%)
 Frame = -1

Query: 379 SPTNLFGSTHNFSLLKT-KAHISPKPIQSSSQNANPKKQ--------GAKXXXXXXXXXX 227
           S ++   S H+  L  T + H+ P    S + +ANP+ +        GAK          
Sbjct: 40  STSHSLSSPHHHRLTPTLRRHLRPPLRVSQTPDANPEPEPEPESEPTGAKLVPFVISVAV 99

Query: 226 XXXIRFIVPKPIQVSTQAWQLLAIFLSTNIGLILGPLPIGAWAXXXXXXXXXXXXXXFEN 47
              +RF+ P+P++VS QAWQLL+IFLST  GL+LGPLP+GAWA              F  
Sbjct: 100 GLAVRFLAPRPVEVSPQAWQLLSIFLSTIAGLVLGPLPVGAWAFLGLTAAVATRTLPFAA 159

Query: 46  AFKGFTSDVIWLIVL 2
           AF  FT++VIWLIV+
Sbjct: 160 AFSAFTNEVIWLIVI 174


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