BLASTX nr result

ID: Coptis25_contig00020572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020572
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264...    91   2e-16
ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|2...    78   2e-12
ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|2...    76   4e-12
ref|XP_002517992.1| conserved hypothetical protein [Ricinus comm...    76   6e-12
gb|ADN33895.1| hypothetical protein [Cucumis melo subsp. melo]         69   5e-10

>ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264907 [Vitis vinifera]
          Length = 466

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 53/119 (44%), Positives = 76/119 (63%)
 Frame = -1

Query: 358 RKQEITPIPSGKNRRGISLGPLEIASGVRSQRGKQEVTPIQPVKNRRGISLGPSEIIAGT 179
           + +E + + +  +RRG+SLGP EI +GVR                 RG+SLGPSEI AG 
Sbjct: 162 KTEESSSVRTKVHRRGVSLGPSEIVAGVR-----------------RGMSLGPSEIAAGG 204

Query: 178 RSQQRGKQELPPIQSAQNSQRKSCFYKLQEVDEGKVLKARGGRSLSLSPQSRLAQSKIQ 2
           R +  GK E+ PI +   S+RKSCF+KL+++DEGKV K R G+S+++SP++R   SK Q
Sbjct: 205 RLRHLGKPEVTPIST--QSRRKSCFWKLEDIDEGKVTKER-GKSMTVSPKNRKIISKTQ 260


>ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|222858304|gb|EEE95851.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 45/76 (59%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
 Frame = -1

Query: 226 NRRGISLGPSEIIAGTRSQQR-GKQELPPIQSAQNSQRKSCFYKLQEVDEGKVLKARGGR 50
           NRRG+SLGPSEI +G++S+   GKQE+    S QN +RKSCF+KL+E+DE K  K R G+
Sbjct: 178 NRRGVSLGPSEIFSGSKSRLLFGKQEMKTPVSTQN-RRKSCFWKLEEIDELKATKER-GK 235

Query: 49  SLSLSPQSRLAQSKIQ 2
           SLS+SP+SR   SKIQ
Sbjct: 236 SLSVSPRSRKNVSKIQ 251


>ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|222862564|gb|EEF00071.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 44/76 (57%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
 Frame = -1

Query: 226 NRRGISLGPSEIIAGTRSQQR-GKQELPPIQSAQNSQRKSCFYKLQEVDEGKVLKARGGR 50
           NRRG+SLGPSEI++G++S+   GKQ++    S QN +RKSCF+KL+E+DE K  K R G+
Sbjct: 178 NRRGVSLGPSEILSGSKSRLFCGKQDMNTPVSIQN-RRKSCFWKLEEIDELKATKER-GK 235

Query: 49  SLSLSPQSRLAQSKIQ 2
           SLS+SP+SR   SKIQ
Sbjct: 236 SLSVSPRSRKNVSKIQ 251


>ref|XP_002517992.1| conserved hypothetical protein [Ricinus communis]
           gi|223542974|gb|EEF44510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 443

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 45/87 (51%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
 Frame = -1

Query: 259 KQEVTPIQPVK-NRRGISLGPSEIIAGTRSQQRGKQELPPIQSAQNSQRKSCFYKLQEVD 83
           KQ V   +P K NRRG+SLGPSEI + T+++   KQE+    S +N +RKSCF+KL+E+D
Sbjct: 165 KQTVKIEEPPKINRRGVSLGPSEIYSATKARLLSKQEMSTPVSTKN-RRKSCFWKLEEID 223

Query: 82  EGKVLKARGGRSLSLSPQSRLAQSKIQ 2
           E K  K R G+S S+SP+SR   SK+Q
Sbjct: 224 ELKATKER-GKSSSVSPRSRKNLSKVQ 249


>gb|ADN33895.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 458

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 11/186 (5%)
 Frame = -1

Query: 526 KPLCTPKVV-----------EQKETSKVSFMPRKIEGSPVVRNGVRSNLRGVSIGPLEIA 380
           KP  TP++V           E++   K   +  +IE +    N + + L+ + I   E  
Sbjct: 91  KPFKTPRMVSAKMYGDKGKEEEEVICKERNVDEEIEETEREINRLATRLKALQIEKAEQK 150

Query: 379 AGGARLQRKQEITPIPSGKNRRGISLGPLEIASGVRSQRGKQEVTPIQPVKNRRGISLGP 200
           A    +QR     PI S  ++        + + GV        V P   +   RG+SLGP
Sbjct: 151 AVRTAVQRGARFVPIRSVDSKASS-----KNSDGVGKMFEDSLVEP--KICKNRGLSLGP 203

Query: 199 SEIIAGTRSQQRGKQELPPIQSAQNSQRKSCFYKLQEVDEGKVLKARGGRSLSLSPQSRL 20
           SEI  G  ++++GK E+ P Q  QN +R+SC  KL ++DE K  K R G S SLSP+SR 
Sbjct: 204 SEIHGGIGARRQGKTEITPAQRIQN-RRQSCLPKLLDIDEVKA-KNRRGNSFSLSPKSRR 261

Query: 19  AQSKIQ 2
              K Q
Sbjct: 262 TLIKAQ 267


Top