BLASTX nr result

ID: Coptis25_contig00020571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020571
         (909 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ99392.1| predicted protein [Hordeum vulgare subsp. vulgare]    141   2e-31
ref|XP_002275144.1| PREDICTED: mitochondrial import inner membra...   140   3e-31
dbj|BAK01493.1| predicted protein [Hordeum vulgare subsp. vulgar...   139   1e-30
gb|EEC75045.1| hypothetical protein OsI_11149 [Oryza sativa Indi...   137   5e-30
ref|NP_001049828.1| Os03g0296300 [Oryza sativa Japonica Group] g...   137   5e-30

>dbj|BAJ99392.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 197

 Score =  141 bits (356), Expect = 2e-31
 Identities = 72/149 (48%), Positives = 95/149 (63%)
 Frame = +3

Query: 168 KAHIQPIEPPRPEDIYAQDFNEQIWFRSSLAGVXXXXXXXXXXXXXXSLDNPITQDQMGA 347
           +A ++P++ P PE+I  Q+       RS L+GV              +L+NPI Q++M A
Sbjct: 48  RAAVEPLQLPTPEEIKGQEMMNNCAVRSVLSGVMGGGLGVLMGLFFGALENPIMQEEMTA 107

Query: 348 KKQFIYTAKQMGTKSLGFAKNFALMGFVFSAAEGVMEKTRAKHDITNSTVAGCVTGGVLA 527
           ++Q +Y AKQMG KS+  AK FA+MG +FSAAE V+EK RAKHDITNS VAGCVTGG LA
Sbjct: 108 RQQIVYQAKQMGRKSMSHAKTFAVMGLIFSAAECVVEKARAKHDITNSAVAGCVTGGALA 167

Query: 528 AKGGPQXXXXXXXXXXXXSYVIDKFIQRH 614
           AKGGPQ            S  I+KF++R+
Sbjct: 168 AKGGPQASCIGCVGFGAFSVAIEKFMERY 196


>ref|XP_002275144.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim22 [Vitis vinifera] gi|297745845|emb|CBI15901.3|
           unnamed protein product [Vitis vinifera]
          Length = 170

 Score =  140 bits (354), Expect = 3e-31
 Identities = 74/152 (48%), Positives = 94/152 (61%)
 Frame = +3

Query: 159 EPGKAHIQPIEPPRPEDIYAQDFNEQIWFRSSLAGVXXXXXXXXXXXXXXSLDNPITQDQ 338
           E  K  I+PI  P  E+I  QD       RS  +GV              +LDNPI Q++
Sbjct: 18  EAEKPQIEPIRMPTVEEIRGQDIWNNCAVRSVASGVMGGGLGLLMGLFLGALDNPIMQEE 77

Query: 339 MGAKKQFIYTAKQMGTKSLGFAKNFALMGFVFSAAEGVMEKTRAKHDITNSTVAGCVTGG 518
           M A++QFIYTAKQMG++S G AK FA+MG +FSAAE V+EK RAKHD TN+ VAGCVTGG
Sbjct: 78  MTARQQFIYTAKQMGSRSWGSAKTFAVMGLIFSAAECVVEKARAKHDTTNTVVAGCVTGG 137

Query: 519 VLAAKGGPQXXXXXXXXXXXXSYVIDKFIQRH 614
            ++AKGGP+            S +I+KF+ RH
Sbjct: 138 AISAKGGPKAACVGCAGFATFSVLIEKFLDRH 169


>dbj|BAK01493.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326496927|dbj|BAJ98490.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 171

 Score =  139 bits (349), Expect = 1e-30
 Identities = 71/149 (47%), Positives = 91/149 (61%)
 Frame = +3

Query: 168 KAHIQPIEPPRPEDIYAQDFNEQIWFRSSLAGVXXXXXXXXXXXXXXSLDNPITQDQMGA 347
           +A ++P+  P PE+   Q+       RS L+GV              +L+NPI  ++M A
Sbjct: 22  RAAVEPVHLPTPEEFKGQEMMNNCAVRSVLSGVMGGGLGVLMGLFFGALENPIMAEEMTA 81

Query: 348 KKQFIYTAKQMGTKSLGFAKNFALMGFVFSAAEGVMEKTRAKHDITNSTVAGCVTGGVLA 527
           ++Q +Y AKQMG KS+  AK FA+MG +FSAAE V+EK RAKHDITNS VAGCVTGG LA
Sbjct: 82  RQQIVYQAKQMGRKSMSHAKTFAVMGLIFSAAECVVEKARAKHDITNSAVAGCVTGGALA 141

Query: 528 AKGGPQXXXXXXXXXXXXSYVIDKFIQRH 614
           AKGGPQ            S  I+KF+ RH
Sbjct: 142 AKGGPQATCIGCVGFGAFSVAIEKFMDRH 170


>gb|EEC75045.1| hypothetical protein OsI_11149 [Oryza sativa Indica Group]
          Length = 167

 Score =  137 bits (344), Expect = 5e-30
 Identities = 71/148 (47%), Positives = 92/148 (62%)
 Frame = +3

Query: 171 AHIQPIEPPRPEDIYAQDFNEQIWFRSSLAGVXXXXXXXXXXXXXXSLDNPITQDQMGAK 350
           A ++PI  P PE+I  QD       RS ++GV              +L+NPIT ++M A+
Sbjct: 19  AVVEPIRLPTPEEIKGQDIWNNCAVRSVVSGVMGGGLGVLMGLFFGALENPITAEEMTAR 78

Query: 351 KQFIYTAKQMGTKSLGFAKNFALMGFVFSAAEGVMEKTRAKHDITNSTVAGCVTGGVLAA 530
           +Q +Y AKQMG +S+  AK FA+MG +FSAAE V+EK RAKHD TNS VAGCVTGG LAA
Sbjct: 79  QQIVYQAKQMGRRSISNAKTFAVMGLIFSAAECVIEKARAKHDTTNSAVAGCVTGGALAA 138

Query: 531 KGGPQXXXXXXXXXXXXSYVIDKFIQRH 614
           KGGP+            S +I+KF+ RH
Sbjct: 139 KGGPKATCVGCVGFATFSVMIEKFLDRH 166


>ref|NP_001049828.1| Os03g0296300 [Oryza sativa Japonica Group]
           gi|113548299|dbj|BAF11742.1| Os03g0296300, partial
           [Oryza sativa Japonica Group]
          Length = 169

 Score =  137 bits (344), Expect = 5e-30
 Identities = 71/148 (47%), Positives = 92/148 (62%)
 Frame = +3

Query: 171 AHIQPIEPPRPEDIYAQDFNEQIWFRSSLAGVXXXXXXXXXXXXXXSLDNPITQDQMGAK 350
           A ++PI  P PE+I  QD       RS ++GV              +L+NPIT ++M A+
Sbjct: 21  AVVEPIRLPTPEEIKGQDIWNNCAVRSVVSGVMGGGLGVLMGLFFGALENPITAEEMTAR 80

Query: 351 KQFIYTAKQMGTKSLGFAKNFALMGFVFSAAEGVMEKTRAKHDITNSTVAGCVTGGVLAA 530
           +Q +Y AKQMG +S+  AK FA+MG +FSAAE V+EK RAKHD TNS VAGCVTGG LAA
Sbjct: 81  QQIVYQAKQMGRRSISNAKTFAVMGLIFSAAECVIEKARAKHDTTNSAVAGCVTGGALAA 140

Query: 531 KGGPQXXXXXXXXXXXXSYVIDKFIQRH 614
           KGGP+            S +I+KF+ RH
Sbjct: 141 KGGPKATCVGCVGFATFSVMIEKFLDRH 168


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