BLASTX nr result

ID: Coptis25_contig00020564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020564
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93622.1| unknown [Populus trichocarpa]                           64   1e-08
ref|XP_002308923.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002284462.1| PREDICTED: uncharacterized protein LOC100255...    59   3e-07

>gb|ABK93622.1| unknown [Populus trichocarpa]
          Length = 121

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 14/133 (10%)
 Frame = +2

Query: 20  MAAPVKPSNELEEVLKPFYXXXXXXXXXXXXXXSTVGSNKTDAENEELVKIISELKAE-- 193
           MAA    +N LE VLKPFY              ++V SN+ DA +EE +K ISEL+A+  
Sbjct: 1   MAASETKTN-LEGVLKPFYQRASEAEDRLSRLEASVASNR-DAGSEEHLKTISELQAKLE 58

Query: 194 ------------QRKATLENAKLQYRILHLVRALEEEETKQESFFGDSSEASLVAKLQYR 337
                        +K  +EN KLQYR++HLV+A+ E + K ES  G  SEAS        
Sbjct: 59  GANAELASEREKAKKLAVENGKLQYRVIHLVQAIREGDAKLESLKG-GSEAS-------- 109

Query: 338 IAHLVRALENVKL 376
            A  +  LEN++L
Sbjct: 110 -AEAIPKLENLRL 121


>ref|XP_002308923.1| predicted protein [Populus trichocarpa] gi|222854899|gb|EEE92446.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
 Frame = +2

Query: 20  MAAPVKPSNELEEVLKPFYXXXXXXXXXXXXXXSTVGSNKTDAENEELVKIISELKAE-- 193
           MAA    +N LE VLKPFY              ++V SN+ DA +EE +K ISEL+A+  
Sbjct: 1   MAASETKTN-LEGVLKPFYQRASEAEDRLSRLEASVASNR-DAGSEEHLKTISELQAKLE 58

Query: 194 ------------QRKATLENAKLQYRILHLVRALEEEETKQES 286
                        +K  +EN KLQYR++HLV+A+ E + K ES
Sbjct: 59  GANAELASEREKAKKLAVENGKLQYRVIHLVQAIREGDAKLES 101


>ref|XP_002284462.1| PREDICTED: uncharacterized protein LOC100255580 [Vitis vinifera]
           gi|147846708|emb|CAN80638.1| hypothetical protein
           VITISV_026887 [Vitis vinifera]
          Length = 102

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 18/98 (18%)
 Frame = +2

Query: 47  ELEEVLKPFYXXXXXXXXXXXXXXSTVGSNKTDAENEELVKIISELK-------AEQ--- 196
           +++EVLKPF+              + + S K D+ NEEL+K+IS+L+       AEQ   
Sbjct: 5   DMKEVLKPFHQRASEAEDRLSKLEAALSSTK-DSGNEELLKMISDLQSKLQHAEAEQISE 63

Query: 197 --------RKATLENAKLQYRILHLVRALEEEETKQES 286
                   +K T+ENAKLQYR+ HLVRAL+E + K E+
Sbjct: 64  REKAQKDIQKLTVENAKLQYRVTHLVRALKEADCKLEA 101


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