BLASTX nr result

ID: Coptis25_contig00020559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020559
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP88919.1| alpha-amylase [Gunnera manicata]                       167   1e-45
ref|XP_002301187.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-44
emb|CAN77038.1| hypothetical protein VITISV_004485 [Vitis vinifera]   161   5e-44
ref|XP_002285213.1| PREDICTED: alpha-amylase [Vitis vinifera] gi...   161   5e-44
ref|XP_002282184.1| PREDICTED: alpha-amylase [Vitis vinifera] gi...   154   2e-43

>gb|ADP88919.1| alpha-amylase [Gunnera manicata]
          Length = 422

 Score =  167 bits (423), Expect(2) = 1e-45
 Identities = 70/93 (75%), Positives = 82/93 (88%)
 Frame = +3

Query: 3   EGGTPDDRLDWGPTMICSDDKEYSDGTGNPDTGGPFGGAPDVDHINPRVQKELADWMNWL 182
           EGGTPDDRLDWGP++ICSDD EYS+G GNPDTG P+  APD+DHINPRVQ EL+DWMNWL
Sbjct: 130 EGGTPDDRLDWGPSLICSDDTEYSNGKGNPDTGAPYQPAPDIDHINPRVQNELSDWMNWL 189

Query: 183 KTEIGFDGWRFDFSPGYSPDFTKVYMGQN*AGF 281
           KTEIGFDGWRFDF+ GY+P FT++Y+G+  A F
Sbjct: 190 KTEIGFDGWRFDFAKGYAPRFTQLYVGKTSANF 222



 Score = 40.8 bits (94), Expect(2) = 1e-45
 Identities = 20/35 (57%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 262 GKTKPDFAVMEVWKSLDY-EQGKLKYNQGAHRQEL 363
           GKT  +FAV E+W SL Y   GK  YNQ  HR EL
Sbjct: 216 GKTSANFAVGEIWNSLSYGNDGKPGYNQDVHRNEL 250


>ref|XP_002301187.1| predicted protein [Populus trichocarpa] gi|222842913|gb|EEE80460.1|
           predicted protein [Populus trichocarpa]
          Length = 404

 Score =  166 bits (420), Expect(2) = 2e-44
 Identities = 69/86 (80%), Positives = 77/86 (89%)
 Frame = +3

Query: 3   EGGTPDDRLDWGPTMICSDDKEYSDGTGNPDTGGPFGGAPDVDHINPRVQKELADWMNWL 182
           EGGT DDRLDWGP++ICSDD  YSDG GNPDTGG FGGAPD+DH+NPRVQKEL+DWMNWL
Sbjct: 111 EGGTSDDRLDWGPSLICSDDTAYSDGKGNPDTGGDFGGAPDIDHLNPRVQKELSDWMNWL 170

Query: 183 KTEIGFDGWRFDFSPGYSPDFTKVYM 260
           K+EIGFDGWRFDF  GY+P  TK+YM
Sbjct: 171 KSEIGFDGWRFDFVKGYAPSITKIYM 196



 Score = 38.1 bits (87), Expect(2) = 2e-44
 Identities = 20/30 (66%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +1

Query: 268 TKPDFAVMEVWKSLDYEQ-GKLKYNQGAHR 354
           T PDFAV E W SL Y Q GK  YNQ AHR
Sbjct: 199 TSPDFAVGEKWDSLAYGQDGKPDYNQDAHR 228


>emb|CAN77038.1| hypothetical protein VITISV_004485 [Vitis vinifera]
          Length = 442

 Score =  161 bits (407), Expect(2) = 5e-44
 Identities = 68/86 (79%), Positives = 76/86 (88%)
 Frame = +3

Query: 3   EGGTPDDRLDWGPTMICSDDKEYSDGTGNPDTGGPFGGAPDVDHINPRVQKELADWMNWL 182
           EGGTPDDRLDWGP+ ICSDD  +SDGTGNPDTG  F  APD+DH+NPRVQ+EL+DWMNWL
Sbjct: 149 EGGTPDDRLDWGPSFICSDDTLFSDGTGNPDTGAGFDPAPDIDHVNPRVQRELSDWMNWL 208

Query: 183 KTEIGFDGWRFDFSPGYSPDFTKVYM 260
           K EIGF GWRFDF+ GYSPDFTK+YM
Sbjct: 209 KIEIGFAGWRFDFARGYSPDFTKLYM 234



 Score = 41.6 bits (96), Expect(2) = 5e-44
 Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +1

Query: 268 TKPDFAVMEVWKSLDY-EQGKLKYNQGAHRQELV 366
           T P+FAV E+W SL Y    K  YNQ AHR+ELV
Sbjct: 237 TSPNFAVGEIWNSLSYGNDSKPNYNQDAHRRELV 270


>ref|XP_002285213.1| PREDICTED: alpha-amylase [Vitis vinifera]
           gi|297741278|emb|CBI32409.3| unnamed protein product
           [Vitis vinifera]
          Length = 424

 Score =  161 bits (407), Expect(2) = 5e-44
 Identities = 68/86 (79%), Positives = 76/86 (88%)
 Frame = +3

Query: 3   EGGTPDDRLDWGPTMICSDDKEYSDGTGNPDTGGPFGGAPDVDHINPRVQKELADWMNWL 182
           EGGTPDDRLDWGP+ ICSDD  +SDGTGNPDTG  F  APD+DH+NPRVQ+EL+DWMNWL
Sbjct: 131 EGGTPDDRLDWGPSFICSDDTLFSDGTGNPDTGAGFDPAPDIDHVNPRVQRELSDWMNWL 190

Query: 183 KTEIGFDGWRFDFSPGYSPDFTKVYM 260
           K EIGF GWRFDF+ GYSPDFTK+YM
Sbjct: 191 KIEIGFAGWRFDFARGYSPDFTKLYM 216



 Score = 41.6 bits (96), Expect(2) = 5e-44
 Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +1

Query: 268 TKPDFAVMEVWKSLDY-EQGKLKYNQGAHRQELV 366
           T P+FAV E+W SL Y    K  YNQ AHR+ELV
Sbjct: 219 TSPNFAVGEIWNSLSYGNDSKPNYNQDAHRRELV 252


>ref|XP_002282184.1| PREDICTED: alpha-amylase [Vitis vinifera]
           gi|297741283|emb|CBI32414.3| unnamed protein product
           [Vitis vinifera]
          Length = 425

 Score =  154 bits (390), Expect(2) = 2e-43
 Identities = 65/88 (73%), Positives = 73/88 (82%)
 Frame = +3

Query: 3   EGGTPDDRLDWGPTMICSDDKEYSDGTGNPDTGGPFGGAPDVDHINPRVQKELADWMNWL 182
           EGGTPDDRLDW P+ IC DD  YSDGTGNPD+G  +  APD+DHINPRVQ+EL DWMNWL
Sbjct: 131 EGGTPDDRLDWTPSFICKDDTPYSDGTGNPDSGDDYSAAPDIDHINPRVQQELIDWMNWL 190

Query: 183 KTEIGFDGWRFDFSPGYSPDFTKVYMGQ 266
           K EIGFDGWRFDF+ G+SP FTK YM +
Sbjct: 191 KIEIGFDGWRFDFARGFSPAFTKFYMAK 218



 Score = 46.6 bits (109), Expect(2) = 2e-43
 Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
 Frame = +1

Query: 265 KTKPDFAVMEVWKSLDY-EQGKLKYNQGAHRQELV 366
           KT+P FAV E+WKSL Y   GK  YNQ +HR+ELV
Sbjct: 218 KTRPKFAVGEIWKSLSYRSDGKPSYNQDSHRRELV 252


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