BLASTX nr result

ID: Coptis25_contig00020545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020545
         (1588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631647.1| PREDICTED: guanine nucleotide-binding protei...   650   0.0  
ref|XP_002306098.1| predicted protein [Populus trichocarpa] gi|2...   645   0.0  
ref|XP_002313052.1| predicted protein [Populus trichocarpa] gi|2...   645   0.0  
sp|P93398.1|GBB2_TOBAC RecName: Full=Guanine nucleotide-binding ...   640   0.0  
ref|XP_002509478.1| guanine nucleotide-binding protein beta, put...   639   0.0  

>ref|XP_003631647.1| PREDICTED: guanine nucleotide-binding protein subunit beta-2-like
            [Vitis vinifera] gi|297741450|emb|CBI32581.3| unnamed
            protein product [Vitis vinifera]
          Length = 377

 Score =  650 bits (1676), Expect = 0.0
 Identities = 303/377 (80%), Positives = 339/377 (89%)
 Frame = -3

Query: 1577 MSVEELKQQHLTATQNLISLKEEVKLKRTTLIDTDVASHVRSQSRTPVSFGPTDLVCCRT 1398
            MSV ELK++H+ AT+ + SL+E +K KR  L+DTDVA + R+Q ++PV+FGPTDLVCCRT
Sbjct: 1    MSVAELKERHMAATETVNSLRERLKQKRLLLLDTDVAGYARAQGKSPVTFGPTDLVCCRT 60

Query: 1397 LQGHSGKVYSLDWTSEKNRIVSASQDGRLIIWNALTSQKTHAIKLPCAWVMTCTFSPSSH 1218
            LQGH+GKVYSLDWT+EKNRIVSASQDGRLI+WNALTSQKTHAIKLPCAWVMTC FSPS  
Sbjct: 61   LQGHTGKVYSLDWTTEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPSGQ 120

Query: 1217 FVACGGLDNTCSIFNLNSPVDKDGNLPLSRMLSGHKGYVSSCQYVPNDDTHLITSSGDQT 1038
             VACGGLD+ CSIFNLNSP DKDGNL +S+MLSGHKGYVSSCQYVP++DTHLITSSGDQT
Sbjct: 121  SVACGGLDSVCSIFNLNSPTDKDGNLAMSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQT 180

Query: 1037 CALWDVTTGQRISIFGGEFSSGHTADVLSVSINRSDPNMFVSGSCDATVRLWDTRAASRA 858
            C LWD+TTG R S+FGGEF SGHTADVLSVSI+ S+  MFVSGSCDAT RLWDTRAASRA
Sbjct: 181  CVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDATARLWDTRAASRA 240

Query: 857  FRTHHGHERDVNTVKFFPDDQRFGTGSDDGTCRLFDMRTGNQLQVYTQQHGDDDVPTVTS 678
             RT HGHE DVNTV+FFPD  RFGTGSDDGTCRLFD+RTG+QLQVY Q+HGD++ P VTS
Sbjct: 241  VRTFHGHEGDVNTVRFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQEHGDNEAPHVTS 300

Query: 677  ITFSISGRLLFVGYSNGDCYVWDTLLAEVVLNLGSLQNSHDERVSCLGMSADGSALCTGS 498
            I FSISGRLLF GYSNGDCYVWDTLLA+VVLNLGSLQNSHD R+SCLG+SADGSALCTGS
Sbjct: 301  IAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHDSRISCLGLSADGSALCTGS 360

Query: 497  WDRNLKIWAFGGHRKLI 447
            WD NLKIWAFGGHR++I
Sbjct: 361  WDTNLKIWAFGGHRRVI 377


>ref|XP_002306098.1| predicted protein [Populus trichocarpa] gi|222849062|gb|EEE86609.1|
            predicted protein [Populus trichocarpa]
          Length = 377

 Score =  645 bits (1664), Expect = 0.0
 Identities = 301/377 (79%), Positives = 335/377 (88%)
 Frame = -3

Query: 1577 MSVEELKQQHLTATQNLISLKEEVKLKRTTLIDTDVASHVRSQSRTPVSFGPTDLVCCRT 1398
            MSV ELK++H+ AT+ + SL+E +K KR  L+DTD+A + R+Q R+PVSFGPTDLVCCRT
Sbjct: 1    MSVSELKERHVAATETVNSLRERLKQKRLLLLDTDMARYARAQERSPVSFGPTDLVCCRT 60

Query: 1397 LQGHSGKVYSLDWTSEKNRIVSASQDGRLIIWNALTSQKTHAIKLPCAWVMTCTFSPSSH 1218
            LQGH+GKVYSLDWT E+NRIVSASQDGRLI+WNALTSQKTHAIKLPCAWVMTC FSP+  
Sbjct: 61   LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQ 120

Query: 1217 FVACGGLDNTCSIFNLNSPVDKDGNLPLSRMLSGHKGYVSSCQYVPNDDTHLITSSGDQT 1038
             VACGGLD+ CSIFNLNSP DKDGNLP+SRMLSGHKGYVSSCQYVP++DTHLITSSGDQT
Sbjct: 121  SVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSSCQYVPDEDTHLITSSGDQT 180

Query: 1037 CALWDVTTGQRISIFGGEFSSGHTADVLSVSINRSDPNMFVSGSCDATVRLWDTRAASRA 858
            C LWD+TTG R S+FGGEF SGHTADVLSVSIN S+  MFVSGSCD+T RLWDTR ASRA
Sbjct: 181  CVLWDITTGIRTSVFGGEFQSGHTADVLSVSINGSNSRMFVSGSCDSTARLWDTRVASRA 240

Query: 857  FRTHHGHERDVNTVKFFPDDQRFGTGSDDGTCRLFDMRTGNQLQVYTQQHGDDDVPTVTS 678
             RT HGHE DVN VKFFPD  RFGTGSDDGTCRLFD+RTG+QLQVY  QHGD ++P VTS
Sbjct: 241  VRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYHQHGDTEIPHVTS 300

Query: 677  ITFSISGRLLFVGYSNGDCYVWDTLLAEVVLNLGSLQNSHDERVSCLGMSADGSALCTGS 498
            I FSISGRLLF GYSNGDCYVWDTLLAE VLNLGSLQNSH+ R++CLG+SADGSALCTGS
Sbjct: 301  IAFSISGRLLFAGYSNGDCYVWDTLLAEAVLNLGSLQNSHEGRITCLGLSADGSALCTGS 360

Query: 497  WDRNLKIWAFGGHRKLI 447
            WD NLKIWAFGGHR++I
Sbjct: 361  WDTNLKIWAFGGHRQVI 377


>ref|XP_002313052.1| predicted protein [Populus trichocarpa] gi|222849460|gb|EEE87007.1|
            predicted protein [Populus trichocarpa]
          Length = 377

 Score =  645 bits (1663), Expect = 0.0
 Identities = 303/377 (80%), Positives = 333/377 (88%)
 Frame = -3

Query: 1577 MSVEELKQQHLTATQNLISLKEEVKLKRTTLIDTDVASHVRSQSRTPVSFGPTDLVCCRT 1398
            MSV ELK++H+ AT+ + SL E +K KR  L+DTD+A H R+Q R PVSFGPTDLVCCR 
Sbjct: 1    MSVSELKERHVAATETVNSLGERLKQKRLLLLDTDIAGHARAQGRNPVSFGPTDLVCCRI 60

Query: 1397 LQGHSGKVYSLDWTSEKNRIVSASQDGRLIIWNALTSQKTHAIKLPCAWVMTCTFSPSSH 1218
            LQGH+GKVYSLDWT EKNRIVSASQDGRLI+WNALTSQKTHAIKLPCAWVMTC FSP+  
Sbjct: 61   LQGHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPAGQ 120

Query: 1217 FVACGGLDNTCSIFNLNSPVDKDGNLPLSRMLSGHKGYVSSCQYVPNDDTHLITSSGDQT 1038
             VACGGLD+ CSIFNLNSP DKDGNL +SRMLSGHKGYVSSCQYVP++DTHLITSSGDQT
Sbjct: 121  SVACGGLDSVCSIFNLNSPTDKDGNLTVSRMLSGHKGYVSSCQYVPDEDTHLITSSGDQT 180

Query: 1037 CALWDVTTGQRISIFGGEFSSGHTADVLSVSINRSDPNMFVSGSCDATVRLWDTRAASRA 858
            C LWD+TTG R S+FGGEF SGHTADVLSVSI+ S+  MFVSGSCD+T RLWDTR ASRA
Sbjct: 181  CVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRA 240

Query: 857  FRTHHGHERDVNTVKFFPDDQRFGTGSDDGTCRLFDMRTGNQLQVYTQQHGDDDVPTVTS 678
             RT HGHE DVN VKFFPD  RFGTGSDDGTCRLFD+RTG+QLQVY QQHGD+++  VTS
Sbjct: 241  VRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDVRTGHQLQVYYQQHGDNEIAHVTS 300

Query: 677  ITFSISGRLLFVGYSNGDCYVWDTLLAEVVLNLGSLQNSHDERVSCLGMSADGSALCTGS 498
            I FSISGRLLF GYSNGDCYVWDTLLAEVVLNLGSLQNSH+ R+SCLG+SADGSALCTGS
Sbjct: 301  IAFSISGRLLFAGYSNGDCYVWDTLLAEVVLNLGSLQNSHEGRISCLGLSADGSALCTGS 360

Query: 497  WDRNLKIWAFGGHRKLI 447
            WD NLKIWAFGGHRK+I
Sbjct: 361  WDTNLKIWAFGGHRKVI 377


>sp|P93398.1|GBB2_TOBAC RecName: Full=Guanine nucleotide-binding protein subunit beta-2
            gi|1835163|emb|CAB06619.1| G protein beta subunit
            [Nicotiana tabacum]
          Length = 377

 Score =  640 bits (1651), Expect = 0.0
 Identities = 298/377 (79%), Positives = 336/377 (89%)
 Frame = -3

Query: 1577 MSVEELKQQHLTATQNLISLKEEVKLKRTTLIDTDVASHVRSQSRTPVSFGPTDLVCCRT 1398
            MSV+ELK++H+ ATQ +  L+E++K KR  L+DTDV+ + RSQ +TPV FGPTDLVCCR 
Sbjct: 1    MSVKELKERHMAATQTVNDLREKLKQKRLQLLDTDVSGYARSQGKTPVIFGPTDLVCCRI 60

Query: 1397 LQGHSGKVYSLDWTSEKNRIVSASQDGRLIIWNALTSQKTHAIKLPCAWVMTCTFSPSSH 1218
            LQGH+GKVYSLDWT EKNRIVSASQDGRLI+WNALTSQKTHAIKLPCAWVMTC FSPS  
Sbjct: 61   LQGHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPSGQ 120

Query: 1217 FVACGGLDNTCSIFNLNSPVDKDGNLPLSRMLSGHKGYVSSCQYVPNDDTHLITSSGDQT 1038
             VACGGLD+ CSIFNLNSP+DKDGN P+SRMLSGHKGYVSSCQYVP++DTH+ITSSGDQT
Sbjct: 121  SVACGGLDSVCSIFNLNSPIDKDGNHPVSRMLSGHKGYVSSCQYVPDEDTHVITSSGDQT 180

Query: 1037 CALWDVTTGQRISIFGGEFSSGHTADVLSVSINRSDPNMFVSGSCDATVRLWDTRAASRA 858
            C LWD+TTG R S+FGGEF SGHTADV SVSI+ S+P +FVSGSCD+T RLWDTR ASRA
Sbjct: 181  CVLWDITTGLRTSVFGGEFQSGHTADVQSVSISSSNPRLFVSGSCDSTARLWDTRVASRA 240

Query: 857  FRTHHGHERDVNTVKFFPDDQRFGTGSDDGTCRLFDMRTGNQLQVYTQQHGDDDVPTVTS 678
             RT +GHE DVNTVKFFPD  RFGTGSDDGTCRLFD+RTG+QLQVY Q HGD D+P VTS
Sbjct: 241  QRTFYGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQPHGDGDIPHVTS 300

Query: 677  ITFSISGRLLFVGYSNGDCYVWDTLLAEVVLNLGSLQNSHDERVSCLGMSADGSALCTGS 498
            + FSISGRLLFVGYSNGDCYVWDTLLA+VVLNLG++QNSH+ R+SCLG+SADGSALCTGS
Sbjct: 301  MAFSISGRLLFVGYSNGDCYVWDTLLAKVVLNLGAVQNSHEGRISCLGLSADGSALCTGS 360

Query: 497  WDRNLKIWAFGGHRKLI 447
            WD NLKIWAFGGHR +I
Sbjct: 361  WDTNLKIWAFGGHRSVI 377


>ref|XP_002509478.1| guanine nucleotide-binding protein beta, putative [Ricinus communis]
            gi|223549377|gb|EEF50865.1| guanine nucleotide-binding
            protein beta, putative [Ricinus communis]
          Length = 377

 Score =  639 bits (1649), Expect = 0.0
 Identities = 299/377 (79%), Positives = 337/377 (89%)
 Frame = -3

Query: 1577 MSVEELKQQHLTATQNLISLKEEVKLKRTTLIDTDVASHVRSQSRTPVSFGPTDLVCCRT 1398
            MSV ELK +H+ AT+ + +L+E +K KR  L+DTDVA + R+Q +TPVSFGPTDLVCCRT
Sbjct: 1    MSVAELKARHVAATETVNTLRERLKQKRLLLLDTDVAGYARAQGKTPVSFGPTDLVCCRT 60

Query: 1397 LQGHSGKVYSLDWTSEKNRIVSASQDGRLIIWNALTSQKTHAIKLPCAWVMTCTFSPSSH 1218
            LQGH+GKVYSLDWT+EKNRIVSASQDGRLI+WNALTSQKTHAIKLPCAWVMTC FSP+  
Sbjct: 61   LQGHTGKVYSLDWTAEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQ 120

Query: 1217 FVACGGLDNTCSIFNLNSPVDKDGNLPLSRMLSGHKGYVSSCQYVPNDDTHLITSSGDQT 1038
             VACGGLD+ CSIFNLNSP +KDGNLP+S+MLSGHKGYVS+CQYVP++DTHLITSSGDQT
Sbjct: 121  SVACGGLDSVCSIFNLNSPTEKDGNLPVSKMLSGHKGYVSACQYVPDEDTHLITSSGDQT 180

Query: 1037 CALWDVTTGQRISIFGGEFSSGHTADVLSVSINRSDPNMFVSGSCDATVRLWDTRAASRA 858
            C LWD+TTG R S+FGGEF SGHTADVLSVSIN S+  MFVSGSCD+T RLWDTR ASRA
Sbjct: 181  CVLWDITTGLRTSVFGGEFQSGHTADVLSVSINGSNSRMFVSGSCDSTARLWDTRVASRA 240

Query: 857  FRTHHGHERDVNTVKFFPDDQRFGTGSDDGTCRLFDMRTGNQLQVYTQQHGDDDVPTVTS 678
             RT HGHE DV+ VKFFPD  RFGTGSDDGTCRLFD+RTG+QLQVY QQH D++VP VTS
Sbjct: 241  VRTFHGHEGDVSAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHNDNEVPHVTS 300

Query: 677  ITFSISGRLLFVGYSNGDCYVWDTLLAEVVLNLGSLQNSHDERVSCLGMSADGSALCTGS 498
            I FSISGRLLF GYSNGDCYVWDTLLA+VVL+LGSLQNSH+ R+SCLG+SADGSALCTGS
Sbjct: 301  IAFSISGRLLFAGYSNGDCYVWDTLLAQVVLDLGSLQNSHEGRISCLGLSADGSALCTGS 360

Query: 497  WDRNLKIWAFGGHRKLI 447
            +D NLKIWAFGGHRK+I
Sbjct: 361  YDTNLKIWAFGGHRKVI 377


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